Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- XR_001739018.1
- Aligned Length:
- 6073
- Identities:
- 64
- Gaps:
- 6001
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTGCAGCAGGCCCTGCGCCGCCGCGCCCCGCGTCCCACCCCGCGCCGCTCCTCACAGCCCTGCGCTCCGGGAA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ACTGCAGGTGGCCGGCAGTGGCCAGGGGATGGCGGGGGCGCTTCTGGAACCTGACTCAGTTTTGTAGGTTCCTT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 ATCTCGGTTGTTTACCGCGGGCTTTGCGGAATGCCCCCGCTTCCGTTTCCGCCCGGCTCCGAACCCCCGAACCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CTTCTACCCGCAACTCCGCCCCGGATTCCCAGAAAGGGGCGACCTGGGCCACAGCGGTACAAGCTGCACCCCGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGACCTGAGAGACCGGAAGTAACCCTTGGCCAACTCTGGCCGCCCCCTGCAGCCGCAGCCCCAGAGGCCCACC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CGCGAGCTTCAGTGGCGGGCCCTCAGCGTCGTGTAAACTTTGCTTAAAATGATCTTGAGAGTTCAATTCTTGGG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GTGAACTGTTGAGAAGATCTGGCATTTTTCCTTTCGAAAGTTGTTGGGAACGTGGACTTTCCCAACAATTGTGT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATGCGCTCGATCTCACTCAGTGGGAGCCGCCGCCCTGGAGGGAATTTCACAATAGCCTGGTCAGGGCGGTTATT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTCCAGAGCAGTTTAATGTCTATTTTGCCCAAGTGCAAGGAAAGCTTGCCTTGGGAAAGCTGGGAATGCTTGGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TAATGAAAAGTTTTTAGAGCCTTTTAAAATGAACCTGTTTCTGCCACTTTTCCACCGCCTCAAAACGACTGGGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AATGTAAACTGGCTTCAAGATGTTCTTGCTTGAGGGTGTCTGGATTTGGACAGAAGGCCATGTTCTTTTAATAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TAACAGTGGCACGCAGTAGAACAAAGGCCACTGAAATTCAGAATCAGTTTTTGGCTCCACGGGCAGGAAGTAAA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTCAAGGACGCCAGAGGTCTTGCGAATATTTTAATTGGTTGACATTTGAAATTTGTTCTTAAGCAATGAGGGGT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAAACCAGTAGGGGGATAGCGTATAGCATAAGTAAAGCTTTTTGGACATCAACAAACTGCGATAATCTACAACA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GACAGCGGGCTCTGGAAGGTTTGACCTGCTTTAGAGAGAGATTTCCGATAAGAGGAACGGAGTTTTTGGCACTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTCGGTTTGGTGATTCCCCTAAATAACCTTACAAAAGTTTCGTTGAACAAAAAACCTGGCTGGAGCTCCAAGAT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTTTTTTTTTTTTTTTTTTTTTTGAGACAGCATTTCACTCTTGTTGCCCAGGCTGGAATGCAATGGCACTATCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTGCTCACCGCAACCTCCGCCTGTCGGGTTCAAGCGATTCTCGTGCCTCAGCCTCTCAAGTAGCTGAGATTACA 1332
Query 1 --------------------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGT 30
|.|||||||||||||||.||||||.|||||
Sbjct 1333 GGCATGCACCACCATGCCCGGCTAGTTTTGTATTTTTAATAGAGACGGGGTTTCTCCATGTTGGTCAGTCTGGT 1406
Query 31 CTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC-------------------------------- 72
||.|||||||||||||.|||||||||||||.||||.||.|||
Sbjct 1407 CTCGAACTCCTGACCTTAGGTGATCCGCCCGCCTCGGCATCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCA 1480
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1481 TGCCCGGCCCAACTCCAAGATCTAAACAAAAAAGACTGGGTTGAAAGGGAGTTTTTAATGTTTACTGTTTGCTT 1554
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1555 TACATCCATTTTCTTGTTTTGTTAATACTTGCTTTACTTAAGCTTTTGGGTCAAATGTCCTCGTTAAAATGGCT 1628
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1629 TTCTCTAGCGACTTTATGTTTTACGTTTCTGTTTGTAACTGACATTTGACCTTCTTTTAACACGGTATTACTTG 1702
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1703 CTTCCTTATACCGGTTTCCAAGGTGAAGCCATTTGCAGGGTCGCTGGGTTTCCCCCTCCCCCCGAAAGTCTTGC 1776
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1777 GCGACCCGGGGTGGGCCGGATAGTGTGCAGTTTTTTGAGCCTTGGGCTGGGGACCTCCAGGAAGCTGAAGCGGA 1850
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1851 AATTGCCTAGGCCCCTGGGGCATTGGAGGTCCTACCGCAGCTCCTAGTAGGTGGTGGGGGCGCAGCGGCTGTCC 1924
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1925 CCACTCAGTCCTGGTGGGGTCGCACGTAACGGTCCTGAGCTATGCATAAGCCGTTTGACCACGCATGGAGAATT 1998
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1999 TTACCACCCAGAGACACGCGAGTGGCCCTGTGCAAGTTTCAACTGCGCGGGGGGCGGGGAATTCCGCAGACAGG 2072
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2073 ATTCTAGAATTTATGTCTTGTGTGGTAACATTTCAGCCGGTGGGTGGCGGGGATTAGGCGTGAAGCGGTTCAGC 2146
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2147 AGGCAGAGGTTCTCGGACGCCCTCCGGCGAAGCCACCTGTTGATGCTTTTGACTTTCTGTCCTTGTTCCTCGTC 2220
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2221 CCATCTGGAGCATTTCCAATTCTGGTTTTGCGGAGCAGCAGGTCTGAGCTTGTCCGGCGAGGGTGGGAGTTGGT 2294
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2295 CCCGGCGGAGATCCAGTGGGAAGAGCCGGCGGCTGCCCGGGCAACTCCCCCACTGGAAAGGATTCTGAAAGAAA 2368
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2369 TGAAGTCAGCCCTCAGAAATGAAGTTGACTGCCTGCTGGCTTTCTGTTGACTGGCCCGGAGCTGTACTGCAAGA 2442
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2443 CCCTTGTGAGCTTCCCTAGTCTAAGAGTAGGATGTCTGCTGAAGTCATCCATCAGGTTGAAGAAGCACTTGATA 2516
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2517 CAGATGAGAAGGAGATGCTGCTCTTTTTGTGCCGGGATGTTGCTATAGATGTGGTTCCACCTAATGTCAGGGAC 2590
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2591 CTTCTGGATATTTTACGGGAAAGAGGTAAGCTGTCTGTCGGGGACTTGGCTGAACTGCTCTACAGAGTGAGGCG 2664
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2665 ATTTGACCTGCTCAAACGTATCTTGAAGATGGACAGAAAAGCTGTGGAGACCCACCTGCTCAGGAACCCTCACC 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 TTGTTTCGGACTATAGAGTGCTGATGGCAGAGATTGGTGAGGATTTGGATAAATCTGATGTGTCCTCATTAATT 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 TTCCTCATGAAGGATTACATGGGCCGAGGCAAGATAAGCAAGGAGAAGAGTTTCTTGGACCTTGTGGTTGAGTT 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 GGAGAAACTAAATCTGGTTGCCCCAGATCAACTGGATTTATTAGAAAAATGCCTAAAGAACATCCACAGAATAG 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 ACCTGAAGACAAAAATCCAGAAGTACAAGCAGTCTGGTGGATGGAATGGAACCTGGATGACCAAAGCCTCCTTT 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 AGCTTGTGGCTAGAAATCGCGTCCCTTTATATTCTTCATATCCCAGATCTGCCAACTCCATTGCCCTGTATATT 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 CATGATCTCTGCAAAATGCTGCCAAGCAGTTCTTAACATTTCAGTCTTCAAGAAAGAATCTGGGATCTGCACAG 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 GCTGGCAGAGCTATGGACATTCAGGGGTTTTGCATGTATGCTGAACCCTACTGCCTTGCTCTGGTATTTGGCCT 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 CACAACCACTGTCCAACTTCGGGTGATGTCACTTGGGTCTCATACCTTCCTTGCATGTGTCCCAAGTTTCACAA 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 AACCTCCTTATGGAAAAGAGCACATTCGATTTCTTCCTTGATAAAAGGGACCAGATTCACATTGGCCTTCTGCT 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 TTACTTGCATTCCTCATTGTCTTTTAGACTCAGCCTCAGCTTGGGCTTTGTTAGCAAGTTCACTGCCACCATAG 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 CATCACAGCCTAAAGGGCATGGCTGAGACTCATTGATCTATAGAGCACTCTTTTACCCCAACATACTCTAAATG 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 ACTGATCAAAGATCAAAAACAGAAGAGCATTTATACTCCATTCTTGTTTTTTGAGACCTGCTTGATTTATTCCG 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 ATTATTTAACACACAGGGACGCAACAGTGATCCCAAAGTGTGTAAAGTTAAAGCCTTCAACTGCAGCTGAGGAG 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 AGGGCAGGAATGGGGACGGTGGTGAGTCAGGAATGACAGGCAGGCAGCCATGACCAGGGCAGCCTCCTCCCCAG 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 GGCCAGGGACTGGGGAGTGGCCTAAGGAGCAGGACCTAAGGGTAGCCCAGAGCTGGGGAAGGGGGCAGAGACCT 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 CCCCTTGGCCTAGGTCTGGAGCTCAGAAGTGCCACATGCCTGAGGGGGCAGCGGCCTGGGAAGGGCCAGAGGCA 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 GGGTCAGGAGAGCACCATTTCCTGGGGGGCTGGGGACAGGGAGGTGCCCTATAGGAGAAGCCAGGAGGGGCCGT 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 CTGCCCCTGAGGTGGGGGCTGGGCTGGAGCAGGCTGCAGCAAGAAAGACCTGAGGCAGGCACAGGGCCTGAGAG 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 CCCAGCTGCCTGGGTTCAGGGGGGCTCCCAGGGCAGCCTGGCCCAGGGAGCAGTCCTGACTCTGCAGGGGATGC 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 CCAGCAAGGGGGGCTGCAGACCCCTCAGAGCCTCCCCTCCTCTCTCCCTGGAAAGGAGCTGGGGAACCCATAGT 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 GCAAATCTGTGGACCACTCAGTTATGGAGGGAGGCTGTGCCTGAAGGTGGACACTGGGGTGCACTCCCTCCACC 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 ATCTCGCCCTGCACCGCTGTCCTCAGTACAGCCACTTCTCGTAAGAGTGCAGGCCATGGATGCCACCGTCGATC 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 TGGGCTGACATGGTCTGCTTCTCAAACTTGAGCTCCCCTGAGTACATCATGGACCGAAGGACAGACAGGCTGTG 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 GGCCCCGATATCCTGGCAGCCATGCTGGATGCCCACTATGAGGTAGGGCACGAACTTCTGAATGGACCCTTTGT 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 CCTGGATGGAGCCCAAGACATCCTGCGTGATCTTCGCCTTATCCCCGTCGTTGAAGTATTGTTTCTGGCTGCTG 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 CTGCTCTTCTCCATGGCATCCAGTGAGCCCATGCCCTGGTACTTCTTGAGCTGCATTCCGTCTGAGAAGAAGCA 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 CTCGCCGGGGGCCTCCATGGTGGCGGCCAGCAGGGAGCCCATCATCACTGTGGAGGCTCCTAGGGCCAGGGCCT 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 TGACCACATGCCCCATGGTCTGGATGCCACCATCGGCTATGATGGGCACACCAAAGTTCTGGGTATGCTTGGCC 4810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4811 ACCTTGTACACAGCAGTGCCCTGGGGCTGACTGCAGGCTATCACTTCCTGGTTGATGTAGATGGAGCCGCGCAG 4884
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4885 TCCATGCCCCTGCCCAGCCCATCCACACCAGCGTCAATCAGGTTGTTGGCCTGGGCTGCTGTCACCACGTTCCC 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 CCCAATCACCTGGAGGTGGGGTTACTTTTGTTTGATGTAATGCACCATGGCGATCTGATACACCGAGTTCCCTT 5032
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5033 GGGACGAGTCCAAGCCTATGACATTGACGCCTACCTGGGTGAGCAGGTCCAGGTGGTATTTGTCATCCTCATGG 5106
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5107 GTACCCACAGCTGCCCCGCCCAGCAGCTGCTCATGGGAATCCTTGGAGGCCACAGGGTAGTCTCGGTTCTTCAG 5180
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5181 CGCGGTGCAGGTGATAATGGCCACCAGCTCATCGCGATCATTGACGATAGGCAGCTTCCTTTCTTACTAAGCTG 5254
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5255 CAGGATCTCATTTGCCTCTTTCAACCTCACACTGCTGGAGCCACCACTAGCTTGATCCTTGGCATCATCACCTC 5328
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5329 ACTGAGGAGGGTGGTGTGGTCCTTCTCAGCAAGAAAGTCGATGTCTCGGGAGGTGACGATGCCCACCAGCTTGC 5402
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5403 TGCCCATGGTACCCGTCTCAGTGATGGGGATGCCAGAGAAGCCATGACGCATCTTGGCCTCCAACACATCACCC 5476
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5477 ACAGTGTGCAAGGGGCTCAGCACCACGGGGTGTGTGATAAAGCCCGGTTCAAACTTCTTGACCTTCTGCACCTC 5550
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5551 ACTGGCCTGGAACTCTGGGGTGCAGTTGTGGTGAATGAAACCAGTACCTCCCATCAGAGCCATCACGATGGCCA 5624
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5625 GGTCGGCCTCTGTCACAGTGTCCATGGGGGAGGAGATCAGCGGCGTCTTCAGAGTGACCATTGGGTCAGGGCTG 5698
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5699 AGGTCAGGTCCACCTCATCAGCTATGAAGTCTATGAATCCTGGGAGAATCAAGAAGTCGTTGTAGTTCAAGGAG 5772
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5773 CAGGGACAAGTTACAGGAATGTTCTCCAAGCAGCAATCCAAAAGAGTCTCAAGGATCCTTCAAATAACTTCAGG 5846
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5847 ATGATAACACCCTATGCCCATTGTCCTGATCTGAAAATTCTTGGAAATTGTTCCATGTGATTAACATGGAACTG 5920
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5921 CCTCTACTTAATCATTCTGAATGATTAAATCGTTTCATTTTCTAAATGTGTTATAATGTGTTTAGCCCTTTCTT 5994
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5995 GTTGCTGTATGTTTAGATGCTTTCCAATCTTTTGTTACTACTAATAATGCTATAAAATAAATATCCTTGTACTT 6068
Query 73 ----- 72
Sbjct 6069 CTTTG 6073
