Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- XR_001742759.1
- Aligned Length:
- 5525
- Identities:
- 64
- Gaps:
- 5453
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCCTGGGCTCAAACAGCCCTCCTGCCTCAGCCTCCCGAAATGCGGGGATTATAGGTGTGTGCCATCACACCGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCTTCAAGTGTATATTCTGCATTTATCTTTTTCATGTTATAGCCCTTAATTATAAAAATTATTTTTGCATAGGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGCATACCATCATTTTCCTTATCTTTGAGTGGGGACAGTTCTGCATAGACTGATATTTGCCCAGTGTAGTAAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCACACAAGCAGAAAAAGAGGCTCTTGGCAGCAGGAGAGTATGGGGGAAATCACAGAAAAGAGGAAGCTCAAGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AAAAGTTCCTAAAAAGCTGTGTATAAAGTCCTTGGCTCCACCCCCAGCTGCTCATGCATGGAGCTGACCCAAAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAATATACCAAAGGCTCTGAGAACTGGCTGTGGTGTAGACTACCACCAGAATGACCACCTGGGTGATGCACATG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TGAGGCAGATCCAAGTAGCACTGCAAAACCTTTGGAAACTGAAGTGACACTAAAGCCACAGCTTACTAAAGGTA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGTCCAAACTTATGATCTGAACCAACCAGGTTAATTGGCAGCTAAAACAACAAAGTAAACATTCACCAAAGGAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTTAACAAGACTCAGAGACTTGTAAAATATATGTAACATTCAGGAATAATCTAAAATTGCTCAACATATAAGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACCAGGAAAATCTCACCAACTTGCAAGAAACAAGCCAGTCCCAAAATGATTCAGATGTTAAACCTATCAGACAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGACTTCAAAGCAGCTATTACAGCCAAGTTCCAGGTATAGCTACTCACAGGTCTGAGGTGGAAGGATCACTTGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GCCCAGGGTGTCAAGGCTGCAGTGATCCTTGATCATGCTACTGCACTCCAGCCTGGGCAACACAGTGAGACCCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTCTCAAAAAAATTAATTAATTGATTGATTAATTAAAAAAGGAGTTCAGACTTTAATTTCCAGTTCAGATGGAG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TAAGCAGCACATATCACTTTATCTTTCCCAAAGATTACAACCAAAAACCCTTGAAAGAAAACACAACTAGGAGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTGAAAAGTACATAATAGCAATAAGAGAGCAGTAAGAAGAGAGAACACTCTTGAAATGAAAGAAAAATTATCTG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAGAAAAATAGAAGCTACAAGAAAGTGCCATGGGGAGTGGGGAATGGAGAGTTGTTGAATGGATATGGAGTATC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGTTTTGCAAGGCAAGAAGAGCTCTAGAGACTGCTTGCGCAACAATGTGAATGTACTTAACACTACTGAACTGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ATACCAAAAATGGTTAAGATGGTAAATTTTATGTTACATGTATTTTACCAGAATAAAACTAAATTGGTATGTAC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTACCTAGAAAGATGTTCATAATATAGTTCTAAGTAAAACTAAATTATGTTTCACAGTGAAGGAAGGGAAAGAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGCAGGAAGGAAGGACAAAGCGGTTATGTACAAACTGAAAACTACATAATTGAAATTAAAACCTTTGCTGGATG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GACTCATTTGCCGAATGGAAATGATAAAATAGTGATCTTAAAAGGTCAAGATCAAGATATATTATCCCATTTGA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AACAGAGAGGAAAAAAGATTGAAAAAAATAACAGACTTGCATACCTGTGGGACAATATCAGAAAGATTAACATT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TATGTCTTTGGTGTCCCAGATCAGGAGGAAGATACTGCTGCAGATGAATATTGAAAAAAATAAAGGATAGAAAC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TTTAAAATTTGGCAAAAGACATGAATGTAAAGATTCAGGAAGTTCAGGAAACCCCCCAAACAAGATACACTAAA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 ATCAACAACAACAACAAAAAAACTACATTGAGATGCATCCAAATTTACTTGCTGAAAATTAAAGATTTTTAATT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GCTGAAAAATTTTAAAATGTGGGCAGGTGTGATGACTCATGCCTGTAATTCCAGTACTTTGGGAGGCCAAGGCG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GGCAAATTGCTTGAGCCCAGGAGTTCAAGACCAGCCTATGGCAAAGCCCCCATCTCTAAAAAAAAAAAAAAATA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CAAAAATTAGCCAGGCATGGTGGTGCACACCTGTAGTCCTAGCTACCTAGGAGGCTGAGGTGGGAGAATTGCTT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GAGCCTGGGAGGTGGAGGTTGCAGTGAGCCGAGATTGTGCCACTGCACTACAGCCTGGGCGACAGAGTGAGACA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CTGCCTTAAAAAAAAAAATTGAAAAAGAAAAATGACACATTACATATATAAAGGCGAAATGACTAAAATGACTG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GATTTCTCATCAGAAATCATGGCGGTCAGAAAGCAGTAGAACATTTTTTTGATGCTGAAAGTAAAGAAGTGTCA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 ACCCAAAATTCTATATTCTGTAAAATTTTCCTCAGGAATGCAGGCAAAATAATTCCTTCCCAGAAGAAGGGAAA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 ATAATGCAGCTGCACTAAAAGAAATGCTAAAGGGAATTCTTCAGGTGGAAAGGAAGTAATACCAGAAGGAAACT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CAAAACTTCAGGAATGAAAGAAGAGCAACAGAAACAGTAAATATATGGATAAATATACTTTTTACTCTTCATAA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TTTCTTTAAAATATGTATAATGGGTGCAAGCAAACACTGTAACATTGATGGTGGGATTTTTGGTGTATGTAGAT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 AATAATACACATGACAACTGCAACATAAAGGGTGGAATGTAAAAGGACCTGTATTGTTGAAAGTTCCCCACATT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTATTTGAAATGATAAAATATTCTTAGCTGGTTTTAAAAGTTAAATACATATATTGGAATCCTTAATCATTAAG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AATATTATTAAAAGTATATAGTTATTTTTGGCCAGGCGCAGTGGCTCACACCTGTAATCCTAGCACTTTGGGAG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GCCAAGGCAGGTGGATCATGAGTCAAGAGATCGAGACCATCCTGGCCAACATGGTGAAACCCCATCTCTACTAA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AAATACAAAAATTAGCTGGAGGTGGTGGTGCGTGCCTGTAGTCCCAGCTACTCAGGAGGCTGAGGCAAGAAAAC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TGCTTGAACCCAGGAGGCAGAGGTTGCAATGAGCCAAGATCATGCCTTTGCACTCCAGCCTGGTGACGGAGCGA 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GACTGTCTCAAATACAAAAACAAAACAAAAAATATATACAGTTATTTTTAAAGCCAAGAGATAGAAAACCAAAA 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 GATATTCAAATAATTCAAAAGAATCCAGGAAAGAGCCAGGCACGGTTGTTCATGTCTGTAATCCCAACAGTTTG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 AGAGGCCAAGGCAGGCAGATTCTTTGAGCCCAGGACTTAGCAGCCTGGGCAACATGGAAAGACCCCATCTCTCC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 AAAACAAAATATTAAAAAATTAGCCAGACATGGTGATGTGTGCATGTAGTCCCAGCCACCCAGGAGGCTGAGGC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 AGGAGGATTGCTTGAGCCTGGGAATCAGAGGTTGCAGTGAACAGAGATCATACCACTGCACTCCAGCATGAGCA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 ACAGAGCAATTCCCTCTCTCAAAAAAAAAAAAAAAATTCAGAAAAGGAGAAAAAGGAATGAAGAAAAAAAGGAG 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 AAAAACAGAAAACAAATAATAGAATGATAGATCCAACTATATTAACAGTTACATTAAAGGTAAATGTTCTAGAA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 ACACCATTTAAAAGCCAGTTTGTCATTTTGGTTAAGAATACAAGACCCAACTATATGCTATATATTAGAAGTCC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 ACTTTAAATGACGTAAGTATGTAAAAAGTAAAAGGATGGAGAAAGATATACCATGTAAAGATTGGCTGAGCACA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 GTGGCTCATGCCTGTAATCCCAGCACTTTGAGAGGCTGAGGCGGGCAGATCACCTGAGGTCAGGAGTTCGAGAC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 TGGCCTGGCCAACATGGTGAAACCCTGTCTCTACTAAAAAAAAAAAAAAAGCCAGGTGTGGTGGAGGGTGCCTC 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CATGAGAGGCTGAGGCAGGAAAATTGCTTGAACCCAGGAGGCTCACTAGCCAAGATCCTGCAACTGCACTCCAG 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 CCTGGGTCACAGAGTGAGACTCCATCTCAAAAAAGAAAAGATACACCATGTAATGACTAATCAAAAGGAAGCTG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 GAATGGGTATATTAATCAGATAAAATAGACTTCAGAACAAGGAAAATTAACAAGTTTGTAGAGGTAAATTGCAT 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 ACTAATAAAGTGGTCACTCAAGACATAATAATTCTGTATGTATGCAGCTAACAACAGAGTGTCAAAATACTGTA 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 CATAAAACAAAAACTAATAAAATAGGAGAAATAGATAATTCTGCAATTATAGATGGGAATTTCAGTTTTCCTCT 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 CAGTAATCAATAAAGCAAGTAGACAGAAAATCAGCAAGAATGTAGAAGGCTGGAAAACCATTAGCCAAAAAAGA 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 AAATTCCAGGCTCAGATTTAAGGAATAAATAAGACCAATTCTATACAATCTCTTACAGAAAATAGAGGAGAAAG 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 AAATAATTTGCAACTCATTTTAAGAGCCAGCATTACCCTAACATTACTAGAGAAAGATATTTCAAAAATAAGAT 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 CAATATCTTGAACACAGACGCAAAAATCCCCAACAAGATATTGACAAATTGAATACAGCAATATATAAATAAAA 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 TTTTCTTTCAGGAATGCAAGGTTGTTCCCACATTTGAAAATCAATGTAGTCCACCATATTAACAGATTGAAGCA 4588
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4589 TAGAAACATGATTTTATGAATAGATGCAGAAAACCCATTTGACACAATTCAACATCCATTCTTTTTATTTATTT 4662
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4663 TTTTAAGACAGGGTCTCACTGTAGCTCAGTCTGGAGTGCAGTGGTGGCAATCACGGCTCACTGCAGCCTGGACC 4736
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4737 TCCTGGGCTCAAGCAGCCCTGCCTCAGCCTCCTAAGTAGCTAGGACTACAAGTGCCCACCACCATGTTTGGCCA 4810
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4811 ATTTTATAACTGTTTATAGAGACAGGGTCTCACTGTGTTGCCCAGGTTGATCTTGAACTCCTGGGCTCAAGCAA 4884
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4885 TCCTCCCGCTTCAGCCTCCCAAAGTTCTGGGATCACAGGCATGAGCCATTGTGCCCAACCTCTACATTCTTTAT 4958
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4959 TGATAAAACTCAATGGAATATGAATACAAGAGAACTTCCTTAATTTAATAAATTGAACTATAAAAAAAACTTGG 5032
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5033 CAGCTAACATAATTCTTTTTTTTCTTTTTTGAGATGGAGTTTCACTCTTACTGCCCAGGCTGGAATGCAATGGT 5106
Query 1 -------------------------------------------------------------------------- 0
Sbjct 5107 GCGATCTCAGCTCACCGCAACCTCCGCCTTCCGGCTTCAAGCGATTTTCCTGCCTCAGCCTCCTGAGTAGCTGG 5180
Query 1 ---------------------------------------------------ATGGGGTTTCTCCATGTCGGTCA 23
|..||||||||||||||.|||||
Sbjct 5181 GATTACAGACATGCGCCACCATGCCTGGTTAATTTTGTATTTTTAGTAGAGACAGGGTTTCTCCATGTTGGTCA 5254
Query 24 GGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------------------- 72
||||.||||.||||||||||||||||||||||.||||||||..||||||
Sbjct 5255 GGCTAGTCTTGAACTCCTGACCTCAGGTGATCTGCCCACCTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGA 5328
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5329 GCCACCGCGCCTAGCCGCTAACATCATTCTTAATGGTGAAGGGCTGATTAATTTGCCTAAGATTGGGAAAAAGG 5402
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5403 CAAAAATGTTCTTAGCATTTCTGTTTAACATCGTGCTAAAAGTCCTGGCCACTGTGATGAGGCAAGAAACAGAA 5476
Query 73 ------------------------------------------------- 72
Sbjct 5477 GTAAGAGGCATACAGATTGGAGAAAATAAAACAGAACTTTCTCTATTCA 5525
