Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- XR_001743947.1
- Aligned Length:
- 3990
- Identities:
- 63
- Gaps:
- 3918
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGAAGTCACTAGGGTGGGCCCTAATCCAACCTGACAGGTGTCCTCATAAGTAGAGGAGATGAGGACACAGACAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATGGAGGAAAGACCATGTGGGGACACAGGGAGAAGATGGCTGAGGGGAGAGGCCAGAGGAGAAACCAGCCCTGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCATGTGTTGACCTGGGACTTCCAGCCTCCAGCATGGGAGAGAGACCCCATGAGCTCGTCAAGCTCCTTCTGTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ACTGATCAGAGATCCCACCGTGAGTCCAGCTCCTGGTCCCATGCTCTGGATATATCGGTCCCTGGCAGCGTGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 ACTCCTTAGCCAAAGACGTGGCAACTGCGGGTGAAGTATCTCTGGGCAGGAAATCAATGCAGAAATGCAACTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGAGAGGGGGCTTGGGGGCCAGTTCCAGGGAGATTGGAACTGCTGTGTTCTCATCAGCAGAAGTGGCCCCTGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CACCCCCATCCTAATCCCTTCTCATGTGGGAGAAGGTCTGTGAGCCCTCTCCCTACCAGGCAGGTTCTATGGCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATGTGGGCACATACCCTGGGGCAGGGGCCGAGGGACTTAACTCACTTCATGAGCGCCAATGGAGGAGCGAAGGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AATGCCTGATGAAAACAACATTCTACCAGTATGCACTGTTTTCTAACCTACAGAGTGCCTCTGTGTTCACTGTC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCATTTGAGAATTCTAAGTAGAATTCTGAACAGGCTGGAGCAGATTGCCCACCCCAAGGGACAGATGTTGGCTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTACTGTTGGTATTCATGGAAGATTCCTTCTGACACTCCCTCCTTCTTTGTAATTGCCATGAACTGGAGCACTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGCCAATATAAATCATCCAAGGGTGAACACGCTGCACATGGACGGCTCCTCTTTGTTTTTGAAGGGATTCCATC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCTATTTTGCCATGTGCTCCTTCACCCCACTCCCCACCCCCGTCTTTCATTTCTTTCTCTGGAAAAGATACTTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AACTCACAGGACTGCGATGTTGAAACGGACACCCAAGAGCATCACAGATGGGCCAGGCCTGGACCTCTCGGGAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AACATTCCTCACGACTTTTAGATAGAAGAGATTAGAGATTTGGGACTGGTGGCAACTGGTAACGTTTTCAGTGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTGGTAAACAGCCAGGGTCCGGAGCTCTGGGAACAGCCTGATTTAGCTCTTTGTTTAAGTTTTGTGTTAGAGGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TCCCAAGAAGCTGATGCAGGGGAAAGAAATTAACAACCATGGCTCATTCACAGCCAGGCAGCCAAATGGACAGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TCTATAAGACTCAAGCCGACAGCGGAGAGAGTGCAACCAAACAGCCTTGGCCCAGCTTTCAGAGGAGAACGTTA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTCACCCCAACTGCTCTGCATCTGCCTGGATGTCTGCCAAGATCTGTGAGCATTACAGCGTTGGTATGCTTTGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GTGAGGCCTGTGGCTATGGCAACAAGTTGGGAGCAACCCGGTCCCTGGGAATGAGAACAGTGTCTAAAATCAGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CAGGCGAGGGGCAGGGAGGAGAGGTAAAGGTTGGACTTGCCTGAAGATGGAGCCGTTTTATTGTTGTGGGTAAA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GCTGCTACCATTAGGGGCTGTTTACAGAGTGGGTGCAGCTCAAGCTGGGAGCATGTTAGACTCAGCGACTACGA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCAACCTATTGACTTGTTCCCATGAGACAGAGTAAATTAACTGTTGCAGTACTGGTCATGTACCACCAACCTCC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGTGAACCAGCCCTCAGTGAAACATTTATGTGAAAGGCCATGGTGTTCCCATAAGAGGGTGCATGTTCTCTCCC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTGACTAACTCTTCAGTATGCCTCATTCTCACGCGCTGGTGTGCAGGAAGGAGTCCAACATGCCCCATTGACAG 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TCATGCCCTGTATGTGGAAAGTCTTCAGGTAGAGCACTGGGCTCAGGTTTGAAGATGTGAGTTCTAATCCTAGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AAGGCCATTACCTCCCAGTGACCTCATGTCTCGATTTCCTCAACCACAAAACAAAGGCATTGGTGAGCTGACCT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTAAGGCCTCTCCAGTTCTCACCTTCTGTGTCTCTACAGACTGGAGACTAGAAGATTATGGGCACTTTTATTGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GTCTTCATTTTGTTTCCATTTCTTTGTAGTCATCAGCTGGAGTTGAGGACAAGTTTTAACAATAGATAGGTTTC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TTTTTGTCTCTTTTTAAAAAATTTTATTTAAAATAAATGCCAAGTGTAGTGGCTCATACCTGTAATCCCAGCAC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TTTGGGGAGGCCAAGGTGGGAGGATTGCTTTTGAGTTTGAGACCAGCCTGGGCAACGTGGTGAGACCCTGTTTG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TACAAAAAATTTTAAATTAGCCAGGCATGGTGGCGTGTGCCTATAGTCCTAGCTACTCTGGAGGTAGAGGCAGG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGGATCCCTTGAACCTGGGAGGTTGAGGCCACAGTGAGCTGTGATTGTGCTATTGAACTCTAGCCTGGGCAACA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GAGCAAGACCCTGTCTCTTAAAAAAGACTATTTTTTAAGAACACTTTTAGGTTCACAGCGAAATTTGGAGGAAA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 CTTGGCATATGTCATATGCCCCCTGCTCCCATGCATGCACAGCCTCTACCATTAGCAATGTCCCCACTCAAATG 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GTACCTTTGTTGTAATCAACAACCCTGTACTGACACATCATCATCACCCAAACTCCATAGTTCACATTAGGTTT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CACTCTTGGTGTGGTGTACATTCCATGGGCTTGAACAACTGTATAATGACATTATCCACCACTGCAGGATCATA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CAGAGTAGTCTCACTGCCCTAAAACTACTCTGTGCTCCACCTGTTTGTCCCTTCTTTCACTCTAAACTCCTGGC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 AACAACTGACCTTTTTACTGCCTCGATAGCTTTGCCTTCTTCGGAATGTCATGTAGTTGAAATCATACATCATG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AAGCCTTTTCAGATTGGCTTCATATAGGTTTCCTTCCTTCCTTCCTCCCACCACCTTCCTTTCTTTCTGTATTC 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CTAACTCTTGGATGTATTTTCCCCAGCATCATGACTTGATGGGACTTTTGCTAAGATAGGCAATCATAGAAAGT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 CATAAATCTCTTGTCAGCCTTATTGGCTCACCTCCGAGATGGTTCCAACACTCTTTAAGGCCCACTTTTCCAAT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CCACAGATTCCCCAGCAGAAGTCCAAGCTGCTGAGCCTCACATCATCTTTTGCACTAGTAATCTTTACCACTAC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TTCACTGTAGCATTTGAAAATTTTCATATGAAGCCATAGTTCTGTGTCTTTTTTTTTTTTTTTTTTTTTTTGGA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GACGGAGTCTTAACCTGTTGCCCAGGCTGGAGTGCAGTGGCACAGTCTTAGCTCACTGCAAGCTCCGCCTCACG 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 GGTTCAAGTGATTCTTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCGCGCCACCATGCCCAGCTAAATTTG 3404
Query 1 ------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCC 56
||||||||||.||||||.||.|||||||||||..|||||||.|||||||||||||.
Sbjct 3405 TTGGCATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTTACCTCAGGTGATCT 3478
Query 57 GCCCACCTCAGCCTCC---------------------------------------------------------- 72
|||..|||||||||||
Sbjct 3479 GCCTGCCTCAGCCTCCCAAAGTGCTGGGATTAAAGGTGTGAGCCACCGCACCTGGCCTGAAGCCATAGTTCTTA 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 ACCTCAGTTGTGCAATAGAATTATCTGGGGAATTTAAAAATTAGAAAAAACCCATGCCCTGAAGATTGTGATCT 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 AACTGGTCTTGCGTAGCGCCTGGGCATTGGTATTTTTTAAATGTTTCCCAACTGATACTAATGTGGCCATTCTG 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 CAAGCCACAGTTGAAAGGCTTATTCAAGCATCCTGTTGCTGAATGCATGTCGTCCTTACCACATGACTCTGGAG 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 GTTTTCTTGTATTCTGATGTGGCTGCCCTGTTGAGGCCTGCCCCTTAGAGTGGAGATTATCCCCTGCAGTAGGC 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 TGCCTGGAATATGATCCCCAGTGATCCCTGCTTCCTGGTATTCAGGCCCTGGTGTGATCCCTTTCCCTTGAAGC 3922
Query 73 -------------------------------------------------------------------- 72
Sbjct 3923 CTGGGCTGGATTAGTGACTTGCTTCTAACCAACAGCATATGGCAAAAATAAATGTTTATTGTTTTAAA 3990
