Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10261
Subject:
XR_001746226.1
Aligned Length:
3688
Identities:
63
Gaps:
3616

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  GTGAAGGCGGCGCAGCGCGGCGCGGGAGGCGTGCTGGGCGCGGGGCTGCGGTGCCCAGAGGCTGCGGCATTAGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GGCTCGGCGCCCCCGACCTTCCGCGTCCCGGGGTGGCGGCGGCGGCGGCGGCGGCGGCGCGGGCGGCATATGAT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCTGAGCTGGCTGCTCCAGAATGAACCACAGCTCTGAGAAGGGGAAGTAGAAACAGCTGGCGCCCTGCCATGGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CTGTGAACCACAGGTGGACCCGGGGGCCACTGGCCCATTGCCCCCCTCCTCCCCTGGCTGGAGTGCCCTGCCTG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GAGGGAGCCCTCCTGGCTGGGGGCAAGAGCTCCACAATGGCCAGGTCCTCACTGTTCTCCGGATTGACAATACC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TGTGCACCCATCTCCTTCGACCTGGGAGCCGCAGAAGAGCAACTGCAAACTTGGGGCATCCAGGTCCCGGCTGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CCAGTACAGGAGCTTGGCTGAGAGTGCCCTCTTGGAGCCCCAAGTGAGAAGATATATCATCTACAACTCGAGGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CTATGCGGCTGGCCTTTGCTGTGGTTTTCTATGTGGTGGTGTGGGCCAATATCTACTCTACCAGTCAGATGTTT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GCCTTGGGGAACCACTGGGCTGGCATGCTGCTCGTGACCCTGGCCGCGGTGAGCCTGACCTTGACTCTTGTGCT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GGTCTTTGAAAGACACCAGAAGAAGGCCAACACCAACACGGACCTGAGGCTGGCAGCTGCCAATGGAGCCCTCC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TGAGACACCGGGTGCTGCTGGGGGTGACAGACACAGTGGAAGGATGCCAGAGTGTGATTCAGCTTTGGTTTGTC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TACTTCGACCTGGAGAACTGTGTGCAGTTTTTGTCTGATCATGTTCAAGAAATGAAGACTAGCCAAGAGTCCTT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GCTGAGAAGCAGATTGAGCCAGTTGTGTGTTGTCATGGAGACTGGGGTGAGCCCTGCAACAGCGGAGGGGCCTG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  AGAACTTGGAGGATGCTCCTCTCCTGCCCGGCAATTCTTGTCCTAACGAGAGGCCACTCATGCAGACTGAGCTT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CATCAGCTTGTTCCTGAGGCTGAGCCGGAGGAAATGGCCCGCCAGCTGCTGGCAGTGTTTGGCGGCTACTACAT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CCGGCTTCTAGTGACCTCCCAGCTCCCTCAGGCAATGGGGACACGACACACGAACTCTCCGAGAATTCCATGCC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CCTGCCAGCTCATAGAAGCCTACATCCTAGGCACAGGGTGCTGCCCGTTCCTGGCGAGGTGACCTAGGGATGAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GGTACTCATCTTCCTTCAAGACTGAGCAGTCAGGAAGGCTTCAGGAGCCCAAGATGGCCAATGGGGAGCCCCAG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ATGTAGAACAATGGTTATGTTTCCCGACATGAACATTGTCCTGGAATGAAGTGTGATCAGCCACTTGTGGAATT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CTTTGAAGAGCTCAGAGGCTTCCAAGTGATCTGCTCCTGAACAAGTTTGAAGACCTATTGTTTCATAGACCCAA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GACCAAACGCATCTAAAGGATCCCCAGCCCCCAAGACCTAGCCTTTGTCTGCGATTTTGGCTTCATCTCCCACA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  AAACCCCTTTATGAGTTCACGCTCTTTCCTGGACTGACATACCTATTCCTTTCCATTTGTTGGACTCCTATTCA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TGCTTCAAAGTCCAGCTTTCTTAAGCCCTTCTTTAGGAAGCCTTCCCACACAGCCAACCCTGCTGCTCTCTGCC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TCCTTTAAATTCTTGATACAGCTGCTGCTTGTTCTGATGTTTTATGGTATTGATTCTGTTTTCCTGTGTATATG  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CCAGTTTTTCTAGCTAGACTGTAAACTCCTTAAGGACAGAGACTACACCTTGTACTTTTTGTGCATGACCTGGA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CCTGCTAAGGAAAAAAAAATCTTGTGGATTGATTGCTTTGCCATCCCCACAGCAGCTTTTGCAAATTGCTTTCC  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AAACTCACTTGAATGATGACATTGCTGTGGACCTGGGTTCTGGACCTGATCTGCCACTTCAAGCTGTGTAATTT  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  TTGGCAAGTTGCTTTCTTTGCCTGGTCCTCAGTTTGCCCATCAATATAATGGGTGGATTGGATGATTTTTTTTT  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TTTTAATTGAGATGGAGTCTTGCACTGTCACCCAGGCTGGAGTGCAGTGGCGCGATCTTGGCTCACTGCAACCC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CCGCCACCTAGGTTCAAGTGATTCTCATGCCTCAGCCTCCCAAGTAGCTGGGACTACAGGTGTGCACCACTACT  2220

Query    1  ------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGAC  44
                                          ||||||||||.||||||.||.||.||||||||.|||||||||||
Sbjct 2221  CCTGGATATTTTTTTGTGTTTTTAGTAGAGATGGGGTTTCGCCATGTTGGCCAAGCTGGTCTTGAACTCCTGAC  2294

Query   45  CTCAGGTGATCCGCCCACCTCAGCCTCC----------------------------------------------  72
            ||||||||||||.|||.||||.|.||||                                              
Sbjct 2295  CTCAGGTGATCCACCCGCCTCGGGCTCCCAAAGTGCTGGGATTACAGACGTGAGGCACCACAACCAGCCTGGAT  2368

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2369  GATTCTTAAGGGCCCTTCTAGGACCAAAGTTCTGGGAATTTCTAGCTTATTCTGCCCCCTCATAGCCCTTGGCC  2442

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2443  TATCTATCTTTATCCACATGCAGAAACATCTGGCAACCCCACATGGCTGAGATGACCTGGTCCTAGGACACCCT  2516

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2517  TGGACAGAAGACTGGCCTACCTAGCAGACCTGGATTTTTCTTCCTGATCTGCTGCTTCCAAGTTGTGTGACCTT  2590

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2591  GGCTAAGTCACTTAACCTTTCTGATTGTCATTTCGCTTTTTAATAAAGTGGGTCTGGTGAACAAGAAATGTAAT  2664

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2665  AAACACGTGGCTTGCCATTCAAGAGATGAGTCTGACCATTCACTTTCTGTGTGCCAGAGAAGAGAGATCATGGG  2738

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2739  TATAGACCAGCCCCTGGAAAGGCTGCTTTGGTCAAGGCTGAGAGCAGCTTTGCTCAAGGAAATTATTCACGAAG  2812

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2813  GTGACCACTGTCTTTCTGACCTGGCACAGAGGAAATGTTGGCTGTGAATGTGACCAATAGAAAGAAGCCCGTAT  2886

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2887  TTCTCAGTCAGTCCTAGAACCCCGGTAAGTAATTAACAGAGAATAAAAATGTGTTTGTTAAATGACAAAGCAGC  2960

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2961  AGTTTTTCAATTGTAAGGTCTGCTTGAGAGCCTTTGATGTGTGTTTCTTTTCCTGACTTTTCCTTTCTTTAGAA  3034

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3035  TTTTTGATGGTCTCACCTGGTGGGTGGGGCTTTCAGGGTATGCCCACAATGTACATTTCTCGGCATCTGTGCCT  3108

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3109  CAGTTTCCTCATTTATAAAATCCCTATGATCTCTGTCTCACCTACTTTACAGGGTTGCTGTGAAGATCGCATAC  3182

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3183  TACACACAGGAATGCTCATCAGTTTTTAAATTTTATTTAATTTTTATTTATTTTTTTTTAAATGTAATTTTTTC  3256

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3257  AGAGAGATAAGGTCTTGCTATGTTACCCAGCCTAGTCTTGAACTCCTGGCCTCAAGTGATCCTCCTGCCTTGGC  3330

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3331  CTCCCATGCTGCTGGGATTACAGGTGTGAACTACCATGCCCAGCCAGCTCCTAAGTCTTAAGGCTCTGTGTTAG  3404

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3405  TGATAGATGTGGCCATGGTGTAGGCAGTGCAATGTCTTCGAGTGAGAGTGAAGGTGGTAACTCATTGCATGGAT  3478

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3479  TCTAGAGTTCTGTTTATTCTAATCCAAGTTCTTCCACTTAAAAACAATGTTCTTCCTCTCATTGAGTCTCATTC  3552

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3553  CTCATCTATAGGATGGGAATAAGAGCATGTACCTGGCAGGTTGTTGTAAGGATTAAATGGTGTAAAAAAATGTC  3626

Query   73  --------------------------------------------------------------  72
                                                                          
Sbjct 3627  AAGTGCTTGCAACTTTGAATACCAAACTTGAGTGAAAGCTCAATAAATTGTTACTTAAAAAA  3688

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