Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10261
Subject:
XR_001749034.2
Aligned Length:
5961
Identities:
42
Gaps:
5914

Alignment

Query    1  ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC--  72
                                     |||||||..||||||.||||||||||||||.|||||||||.||||||  
Sbjct    1  -------------------------CTGGTCTCAAACTCCCGACCTCAGGTGATCTGCCCACCTCGGCCTCCCA  49

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct   50  AAGTGCTGAGATTACAGGCGTGAGCCACCGTGCCCAGCCAAGTTTAATTTTTACACCAATGATTCATTTCTGCT  123

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  124  TTTACAGGTGATTACTTTATCTCACTAGAAAAAAAAAATGTAAAAATCTAAACAAAAAGTGTCCAAAACTTACA  197

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  198  ATAAGCCTTAATCTCGAATAATTACCATGACATGTGTTACTTGTGTGCTTATTGCTGTACAGCCTTCTTTGGCT  271

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  272  TTCTGACAAGAGCAACTGCTGAGCAGAAGCACTTCAGCCTCGTCTGGCATTTGATGAATTTGATTAATGTGTGC  345

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  346  TATGGTTTTTGGGGAACAGGTGACATTTGGTTACATGATTGTCCTGAAGCTAGGAACTTATCCACAGGGCAAAA  419

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  420  ATTGGAGAATGCTTCTCTAACACAGTTGAAAGAATGATCCAGTGAGAATTAGAAGACACTAAGGATCATGTGAA  493

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  494  AGAGCTCCCTGAGGACAGATTAAGAGGAGATGAGTTAAAGCTGCAAATACCAAGATTTAAGATGAAATTAAGAA  567

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  568  TGCTGATCAGCTAAAGGACCTTCACATACAAAGGTTATCCTGGATTATTCAGGTGGGCTCAACGTAATCACAAG  641

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  642  GATCCTTTAAAGTGGAAGAATGAGGTCAGAGTGATGTGATGTGAAAAGCACTCAATTTGCCTTTGCTAGTTTTG  715

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  716  AAGATGGAAGAATGGGGCCATGGTCCAAGGCATGCTGGTGACCTCTAGAAGCTGAAAAAGTTAAGAAAATGGAA  789

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  790  AAGAAACTTCAGCGCAGTGAGGCCCAATTTGGACTTCTGACTCCAGAACTGCAAGATAATACATTTGTATCCAT  863

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  864  TAAGCCACTAAGTTTGTGCTAATTTGCTATGGCAGCAACAGGAGACTAATACACCTTGGCAGCCCTATTTGCAT  937

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  938  CACCTTGCGGGTACTGGGGTTTGGAGGAATTGGCTCAGATGCTGATACCGTGGCTACTACTATTGTGTCAGAAA  1011

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1012  CGTGACTGAAACATTTCTTCCTCTTAAGAGGCATTAAGAGAAAAGGATAGATTTCCTGTTTCTTTTGCAATTTT  1085

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1086  CCTCTTTAAGAAACAGAAAGAAAAAAAGATCTTATGTCCATGCTCCTGGAAGTCACCAATAAATAATACGGGCC  1159

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1160  AGGGCTTTTTCTTTTCAGCAGTGGGCTGATTAAATCCTTATACTTGTTCTGGGTTATATGTCTGAAATTTGTGT  1233

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1234  TCCTTTTGTTCTGAGGAGTACAAAATAATCAATTCCTCTAATGGAGATTACCAGCTTGATTAATAGATAATCCT  1307

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1308  AATGTGTTCTTTGTAAAATACATTATAAATGATCTTTAAAGTTGAAGGAAAGAAGATTGGGCCATGTAGAAATT  1381

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1382  TGGTTCTCAACAGAACCTCTTCTTGATTGAAGAAATATAAGCAAAGAGTTTTATATATTTCGGTAAGGGTAGGT  1455

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1456  AGTCTATGCATTTTCTGTTCTGAGTATTACAAAAGGAAAAGGGAATAAAAGCTTCTGCATATAGCAGAGATAAA  1529

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1530  CTCCAAAAGCAGGAGACCAGTGAAGCCCTGGATCACTGCACTCCTCCAGCCTTCAAGGAGCATGAAGAGGGTCC  1603

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1604  ACATAACAACAGAAGATGCTTCAGAACAAATTATGAGTCCATAAGAGATAAATTAGTGTCTTTATTCATTGCAA  1677

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1678  AGGAATGGTTATTATAAAAAAATCCCTGATGCTGTCTCTCAGACTGAACTTACGTATAGGCAGGAGAACACATG  1751

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1752  TAATTTATTGACTGATAAAACTGTAGGTAAGAATACATATGACTTCTATAACTTGTATGAAAAATGAAACTACA  1825

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1826  CTTAAATGTAGGAGCAGTTTATATTGTTTGATATTTAACTGGTTGAGTGGTTAACATATAATATTTAAAAAAAT  1899

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1900  CTTCTTTTAGTAGGCAGTTTAATGCTTATGGTCTAATTTTTATTTGAAGACATTTTGCTGCAGCAGAAACATAG  1973

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1974  CTGTGATTCATATACCTACTCTTGATATTAGCCTGGCCGTTTGTCCTGTGACGCTTAAGCTAGTTACCACCATT  2047

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2048  TATCTGGTAACTGTTTCCAGAATTGAAGAGATGATGCCTGGAAGGAGATAAACTTCAGGAGTTCACCTTTAAGC  2121

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2122  CTAAAAAGTACCAGCAAAATGCAATGACAGGATAAAAAGTTTGTCATAAATATTTTCACAAGATGGAAGACAAG  2195

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2196  AAAGCAAAGAGCAGCATAGAAAGAATGAAGGAATAAATAAAAATAAGTGAAAATGCTGCATTTTCTCTCATGGG  2269

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2270  ATAGATTTTTCAACAACTCCTGAACTATGACCTCTCAAGTTCTTTTGCAGTTCTGTTCTAAGAAGTAATGAAAT  2343

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2344  ACATTTAATATTCCTGTCTTTTCACAACATTAATTCATTCCTACTTTAGCCTTAAGAATTTTAGTAGAATCTAT  2417

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2418  TGTTTATTCATGCGTATAAATATTGTGGAAAAATATCTTTAGATGAGTTAGTATATATGAGACACTTAGGCCAG  2491

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2492  GATTTGGCACATGTCTGTACTTCATAAGTGTTTGTTATTGTTATTTTTAACAAGAGTAAAAAAAGATCTTATGA  2565

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2566  CGCATCTAATATCATTTAAGCTGTTTATGGTTACTCCTTGGAATGCCTTCTGGTCAAAAGTTTCTGCAGCCCAG  2639

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2640  CACGACATTAATTTGAATGCATTGAGCCGGTTTCCCAGAGGGCTGGATGACATTTTTGACTTTTTAGGATTTTT  2713

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2714  GAGACTTTTTCTAATGACTAAGGTCAAAATCTCCCTTTCCTTGTCTCTTGAGTTTTAGGGGGCAACCAGAGATG  2787

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2788  TTTTGAAGGAAACCAACCATTAGATGTCACTTTCTTCTCACTGCTTTTGGTTTTAGGACCTATGACCTGGGTTT  2861

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2862  AAGCCTTTTGATTTTCTTCTTTTTTTTGAATGTCTATAAATAGTCTCTATGTCAAAGCTAAACGGGAAATTTAA  2935

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2936  TTTTAGATTAGTAGATAAGAGACAATACTCAACTCCTTGGAATGATGAAATTTTGGACCTGTTTTAAATTGGCC  3009

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3010  TGACTCAATGTCCCTAGTTGACTAAATTTGGAAATGTAGTATTTGTGCTTTTCTTTCTCACTGAAGTTAGTGTG  3083

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3084  GCACTGTTTCTACACCAGACACTTAGGCCTGAGTGTATGAGTGTATCCTTATTCAGGTCAAAGCTAATGAGTTT  3157

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3158  TTTTTTTTTTTTCCTTAGCAATCACTGAATGAAAAACATATTCTTCAGATATCTGTTTAGAATTGCTTTTCCAG  3231

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3232  AAAACCTTTGTGATCTTTCTCCCCCAACAGAAGGGCTCAGAAACACATAACAGTTTGAAAAAGAGAAAAAATAC  3305

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3306  TGCTGCTATGGTCTGAACATTTATGTCTGCTCCAAAATTCATGTTGAGACTTAATCCCCATTGTGGTGGTAGTA  3379

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3380  GGAGGGGTGCCTTTAGCAGGTGGTTAGGCCATGGGGGCTCTGCCCTTGTGAATGGATTAGTGTCTTGTAAAAGG  3453

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3454  ACTAGAGGGAACTGGCTTAAGGTCTCCTTACTCCTCCTCCTTCTGCCATGTGAGGATGCCACTGCAAGAACATG  3527

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3528  CCACTGATGGAGCAGTCCTCACCAGACGCCAAACCTACCAGTGCCTTGACCTTGGACTTCTCAGCCTCTAGAGC  3601

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3602  TGAGAGAAATACATTTATATTCTTTATCAATTGCCCAGTGTCAGGAACTTTATTATAGCAGCACAAATGGATGA  3675

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3676  AGATAACTGCCAATCATGATTTTAGGAAAGAACCTGACTCAAGAACATCTTCTTGGCCGGGCCCGGTGGCTCAC  3749

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3750  GCCTGTAATCCCAGCACCTTGGGAGGCTGAGGTGGGCAGATTACGAGGTCAGGAGATCGAGACCATCCTGGCTA  3823

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3824  ACATGGTGAAACCCCGTCTCTACTAAAAATACAAAAAATTTAGCCGGGCATGGTAGCGGGTGCCTGTAGTCCCA  3897

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3898  GCTACTTGGGAGGCTGAGGCAGGAGAATGGCGTGAACTTGGGAGGTGGAGCTTGCAGTGAGCTAAGATTGTGCC  3971

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3972  ACTGCACTCCAGCCTGGGTGAGAGCGAGACTCCGTCTCAAAAAAAAAAAAAAAAAAAGAATATCTTCTTTCCAG  4045

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4046  TCTTATACCTTCTGCTTCCCCTCATCATTTCTATCCTGTAGAAGCCTGACACTGAGCAGTGGCCAGAAGGAGGT  4119

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4120  TTTGAGCTCTTTGAGACTTGTTTCCTTGGTGGCCATAGGCTTTGCTCTATTGAAGACCTTTAACTAGTAAAGGT  4193

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4194  TATTCGTATCTTTGGGTCTGAGAATGTGTCCAAAACCTATGAAGCACTCATCCTATATGACAGGATTAAAATGC  4267

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4268  CCACGGATGTCCAAAACCAAAAAACAAACAAGTAGCTTTTTACATTTTATTTAACCGACATTTCATCTTGCTTT  4341

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4342  TGCTCCTACTGATATGAAATGAACACCCCACAACCCTTAAAATGCTGTATTAGTTTGCTATGGCTGCCGTAATG  4415

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4416  AAATGCCAGGGACTGGATGGCTGAAACAACAGAAATTAATTTTTTTATGGTTTTAGAGGCTGGAAGTCCAAGAT  4489

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4490  TCGGGTGTTGGCAGTGCTCGTTTCTCATGAAGCCTCTCTCCTCGGCTTGCAAATGGCTGCCTTCTCTCTGTGTT  4563

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4564  CTCACATGGTCTTTCCTCTGTGTGTGGGCATCTAGTGTTTCCTTGTATGTCCAAATTTCCTTTGCTTATAATAC  4637

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4638  CAGTCAGATTGGATTACTGTCTACCCTTAGGGCCTCGTTTTAACTTCATCACCTCTTTAAAGGCCCTATCTCTA  4711

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4712  AATACAGTTAAGTTCTGGGGTATGGAGGGTTAGGGCTTCAACACACAAATTTGTGTGTGTGAGGGCACAATTCA  4785

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4786  GCATATGCCCCTGGTCAATAAAAAGCAACCCAGTTTCTTCTGTTTCAAATCAATTGCTTTCTGCTAAATACTCA  4859

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4860  TTAAAAGTTTAAGCTTTTCTTATCTCTCAAGGGGTCTCTCCTCATTCCTCCTTCCCAAGTTGGTGCCTGGGTTC  4933

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4934  ATGCAGAAGCTTAGTATCTTGAAGAGAGTGGAAGAGGCCTTTACCCTCTGGGACTTTGCTGGACTCTACCAGCT  5007

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5008  GGACCCTTATCCCACTGTGGTGACCAGGCCTTCTGTGCTGGTGTTCCTCATAGTGGGCTGGTTGGATCCTATTC  5081

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5082  TTGGTCATTCTCTTGACTGTCACTGCTAGTGGCTGTGAGATTTGCCATTGCCTCGGGAGGTAAGGTCTCTGTAG  5155

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5156  ACTCTCATTTTTTTTCTCCAGATCACAGGTATCTTCCAATCATTGCGAAAGACTGTAAATTGAAAGAAAAGATT  5229

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5230  ACTGCGAGTCTTTAATGAAAAACAAAGCATAGTCTAGTGTATCCTTCTAGTTATCTGGTTCCTTTCATTGTGTT  5303

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5304  TGAGCTATTTTACAGTTCTGTAAATTGTAGGAAACTAAAAGTGATGTATATGATTCTTGTCTGCAGCAATGCAA  5377

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5378  ATGACTTGTATCTAGTGGAATGCAATAATTTATTGCCCTGCAGACAGCTCCATTTTGCATCTATTTGTAAATTT  5451

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5452  GTTGCAGCATTTATATATATATTCTTTGAATTCTCTTTAGAGCCAGATGTAACATCTTACCAATTCCCTCATTA  5525

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5526  ATTAATGAGTTAAAAACAGTCTTTGAATTGTGTTCAGTTTGTATTTGTATGGGAGTCATTATACTTCCCTGAAA  5599

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5600  AAATGAAATTATCTTTTAAAAAGTCTATTGTTCTTAGAATTTCCATGTTACCCATGTGAGCATATGCAAATTTC  5673

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5674  AGGATCTACTGCATGCTATTCTCAAGTAATGGACTACTAGAAATGCTAGCTCTAGCTCATCTAGCTAGCCAGGC  5747

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5748  ATGGAGATTTGGGGAATTTTTTTTTTTGGCAGGAGTGTGGTAGTGGTGGTGGTGGCGTTTCTGTCAGGTTGTGG  5821

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5822  CCCAGGAAGGTGGTATGTAGGCCCTGATTTCTTTCTTGGAATCTCAGGCATTATATTACGCTAGCTTTACCTTT  5895

Query   73  -----------------------------------------  72
                                                     
Sbjct 5896  TCAATTTTTAATATTTAATATTTTTTGGGATGGATTCTTTC  5936

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