Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- XR_001749586.2
- Aligned Length:
- 4785
- Identities:
- 67
- Gaps:
- 4713
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTTACGCCGCTGATGTGGAGTAGGGCCGAGCGCGGAACGCGAGGGGCTGCTGGGGTGTTTGTCGCAGCGGGTTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCCTCGGCGGTTTGCGGAGCTGCTAGGATGGAGCAGGTTGCGGAGGGAGCAAGGGTGACCGCAGTCCCTGTGTC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGCTGCCGACAGCACTGAGGAGTTGGCCGAAGTCGAAGAAGGAGTTGGAGTAGTGGGCGAAGATAATGACGCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCGCGAGAGGAGCGGAGGCCTTTGGCGACAGTGAGGAGGACGGAGAGGATGTGTTCGAGGTGGAGAAGATCCTG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GACATGAAGACCGAGGGGGGTAAAGTTCTTTACAAAGTTCGCTGGAAAGGCTATACATCGGATGATGATACCTG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGAGCCCGAGATTCACCTGGAGGACTGTAAAGAAGTGCTTCTTGAATTTAGGAAGAAAATTGCAGAGAACAAAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCAAAGCAGTCAGGAAGGATATTCAGAGACTATCCTTAAATAACGACATATTTGAGGCGAACTCTGATAGCGAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAGCAAAGTGAGACAAAAGAAGATACTTCCCCAAAGAAGAAAAAGAAAAAATTGAGGCAGAGAGAAGAGAAAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CCCAGATGATCTGAAAAAGAAAAAAGCAAAGGCCGGGAAGCTAAAAGACAAGTCCAAACCAGACCTGGAGAGCT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTTGGAAAGTTTAGTTTTTGATTTAAGGACAAAGAAAAGAATTTCTGAAGCCAAAGAAGAACTAAAGGAGTCC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAAAAGCCCAAAAAAGATGAAGTAAAAGAAACAAAAGAATTAAAGAAAGTTAAAAAGGGTGAAATAAGAGATTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAAGACGAAAACAAGAGAAGATCCCAAAGAAAATAGAAAAACAAAAAAAGAAAAATTTGTCGAATCCCAGGTGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AATCTGAATCAAGTGTACTTAATGATTCTCCCTTTCCAGAGGATGACAGTGAAGGGCTACATTCCGACAGCAGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAAGAGAAACAAAACACTAAAAGTGCAAGAGAGAGAGCAGGGCAGGACATGGGGCTGGAGCATGGCTTTGAGAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCCCCTAGACAGTGCCATGAGTGCTGAGGAGGATACCGATGTCAGAGGCAGGAGGAAAAAGAAGACCCCGAGAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AGGCTGAGGACACTAGAGAGAACAGGAAGCTAGAGAACAAGAACGCTTTCTTAGAGAAGAAAACTGTGCCTAAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AAGCAGAGGAATCAAGACAGAAGCAAAAGTGCTGCAGAGTTAGAGAAGCTGATGCCTGTATCTGCCCAAACGCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AAAGGGCCGGAGGTTGAGCGGGGAAGAGAGAGGCCTCTGGTCCACGGACTCAGCCGAGGAGGACAAAGAAACCA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AAAGAAATGAATCCAAAGAAAAATATCAGAAAAGGCATGATTCTGACAAGGAAGAAAAAGGCAGAAAAGAGCCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAAGGATTAAAGACACTTAAGGAAATCAGAAATGCATTTGATTTATTTAAATTAACTCCAGAAGAAAAAAATGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TGTTTCTGAGAATAATCGGAAAAGGGAAGAAATACCACTGGATTTTAAAACCATAGACGATCACAAAACCAAGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AAAACAAACAGTCACTTAAAGAAAGGAGAAACACCAGAGACGAAACGGATACTTGGGCATACATTGCTGCAGAA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGTGATCAGGAGGTTTTAGACAGCGTGTGCCAAGCAGATGAGAATTCAGATGGCAGGCAGCAGATTCTGAGTTT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GGGCATGGACCTGCAGTTGGAATGGATGAAGTTGGAAGATTTCCAAAAGCACCTTGATGGGAAAGATGAGAATT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTGCTGCAACAGATGCAATTCCAAGTAATGTGTTAAGGGATGCTGTGAAAAATGGGGATTATATTACTGTAAAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GTTGCACTTAATTCAAATGAAGAATATAACCTGGACCAAGAGTAGAGACGGGGTTTCACCATGTTAGCCAGGAT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 GGTCTCGATCTCCTGACCTTGTGATCTGCCTGCCTCCGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCGCCTGGCCACGTATGGATTTTTTTAATGGAAGCATATTGACCCTTTCTCCCTAGATTTTAGGATTCCAGTGG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AATGACACTGGTGATGCTTGCCGCCGCCGGAGGGCAGGACGACCTCCTGCGACTCCTCATCACAAAAGGCGCGA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 AAGTGAACGGTCGGCAGAAGAACGGGACCACCGCCCTCATTCATGCTGCAGAGAAGAACTTTTTAACAACAGTG 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GCTATTCTTTTGGAAGCAGGAGCTTTTGTAAATGTCCAGCAAAGCAATGGTGAGACTGCACTGATGAAGGCCTG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TAAAAGAGGAAATTCAGACATCGTACGACTCGTAATTGAATGTGGAGCTGACTGCAATATTTTGTCAAAGCACC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AGAATAGTGCCCTGCACTTTGCGAAGCAGTCTAACAATGTGCTTGTGTACGACTTGCTGAAGAACCATTTAGAG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ACACTTTCAAGAGTAGCAGAAGAGACAATAAAGGATTACTTTGAAGCTCGCCTTGCTCTGCTAGAACCAGTTTT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TCCAATCGCATGTCATCGACTCTGTGAGGGTCCAGATTTTTCAACAGATTTCAATTACAAACCCCCACAGAACA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TACCAGAAGGCTCTGGCATCCTGCTGTTTATCTTCCATGCAAACTTTTTGGGTAAAGAAGTTATTGCTCGGCTC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TGTGGACCGTGTAGTGTACAAGCTGTAGTTCTGAATGATAAATTTCAGCTTCCTGTTTTTCTGACAGGGTCTCG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CTCTGTTGTCCAGGCTGGAGTGCAGTGGCGCGGATTACAGCTCACTGGAGTCTTGACTTCCCAGGCACAAGCAA 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TCCTCCCACCTCAGCCTCCTAACTACCTGGGACTAAAAATGCACGCCACCACATCCGGCTAATTTTTTGTATTT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TTTGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTTCTGGGCTCAAGCGATTGTCCGCCTTG 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GCCTCCTCCACAACATCTTGACTTATGAAATAAAAAATAAAACTTATTTATGATTCTTTTACATCATTGGTGTT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TTAAGGGCTTCTGGTGTAAGTTTGAAAACACTGACTTTTTTTTTCTCTTTCCATTGTAGGACAGTCATTTTGTT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TACTCATTCAGCCCTGTTGCAGGTCCCAATAAACTCTTCATAAGGTTGACAGAAGCACCCTCTGCCAAGGTTAA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GTTGCTAATAGGTGCATACAGAGTGCAGCTGCAGTGACCAAACAGAAGGGACTGGGCGGAGTTCTCTTCAGACC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 GATTCCTATACTCTCTTTGACAGCAGTTTGGAATTCTTCTAGCACATCTATGTAAAGTTTTGTCTGTAAACCTC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TTGCAGTTAAGCCTGTTGTCTGTTGTAGTCTGTAAGATGCGACATAGCTGTGTCTGTGCCAGTATGCCGGAATC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TCAGTGCAGTGTCCAGACTGCGTATTTCAGTTTTTCCACAATGTGGATAGTACATATGAGGATTATTTAAGAAA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 ATTAAAGACTTCACTTTCTTTTTTCTGGAGACGGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAATGGTGCG 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 ATCTCGGCTCACTGCAAGCTCTGCCTCCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGAT 3626
Query 1 ------------------------------------------------ATGGGGTTTCTCCATGTCGGTCAGGC 26
|||||||||.|||||||.||||||||
Sbjct 3627 TACAGACACCCGCCATGGCACCCAGCTAATTTTGTATTTTTAGTAGAGATGGGGTTTATCCATGTTGGTCAGGC 3700
Query 27 TGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC---------------------------- 72
||||||.|||||||||||||||||||||||||||.||||.||||||
Sbjct 3701 TGGTCTTGAACTCCTGACCTCAGGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTTGGATTACAGGCATGAGCC 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 ACCGCACCCAGCAAGAGTTATTTTCTTAACTTGAAATTTTCTACTAGCCCTGGTGAACTTCTGTGCTTAAAAAA 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 AAAAAAAAAAAAAGGAAAAATTCAGCTCTAAAACATTTGCTTACAGCAAGGGAGCCATGTTATATTCAAGTTAC 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 CCAAGCACCAAATAAAGTGTGGGTTTGCTGCCCTTGAAAGGGTTGGGAGGCCTGATCTTTTTCTAGTAGACAGT 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 TGCCACACATTCCCCAAGCACAAAAGGTGGAGATGGCAGTCACTTTGTAAATATGCTGTAGTCACTTATCATCT 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 TTTCAAAGGGTAACAAGAGAATCTAAGATGTAGTAAGAATGTAAACCAGTACACTATGAGACCTAAAAGAGAGT 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 ATTAAATGTGAACTTTTAGCAGAGCGTGGTGGCTCACACCTATAATCCCAGCGCTTTGGAGGCTGAGGTTGGAG 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 GATTGCTTAAGTCCAGGAGTTCAAGACCAGCCTGGGTAACATGGGGTGGAACAAGCCTGTAGTCCCAGATACTC 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 AGGAGGCTGAGGTGAAAGGATTGCTTGAGCCAGGGAGGTCAAGGCTGCAGTGAGCCGTGAAAGGCCACTGCACT 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 CCAGCCTGAGTGACAGAATGAGACCTTGTCTCAAAAAAAAAAAAAAGTTTCTTGGAACCTATACGGTTTTTTTT 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 TGTTTTTTTTTTTTGAAAAGCCAGACCTTGTGCCCTTGTTTTGAACACCGACTGGGAAGATGGGGCTTAGGTAA 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 CAGCCAAACCTGGCTGTCAGCTGTGTGGGAGCCACCACCCTCTCTGGGAAGAGTTCCTGCTTCTGTATGGCAAG 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 CATAAATCAAGCTCAGTCTGGGTTATGGAGAAGTTGAAAATTGTTTTGTTCCTCATTAGTTTATAATTGTATGA 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 AATACGATTTTAATGAAAACTTTTCAGAATTCACGTTTGTGTAGATATTTCAGAGAACCATTTTTACTTTACAT 4736
Query 73 ------------------------------------------------- 72
Sbjct 4737 CCTAAAACTGCCTTTTCCTATGGTTTTGTCAATAAAACACTATGATGTT 4785
