Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- XR_001750902.1
- Aligned Length:
- 3028
- Identities:
- 65
- Gaps:
- 2956
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATTCTTAATGAGTAATTCTTAGGATTTAGTACAAAATTAGATATATTCTTTTTATTCGTAATGATATAGCATGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGTTCTTGCGGGGTAGGAGAGAGAGGTATTCATCTGAAAACTGGCTCTGTTTTAGTGTAGACATTTGTCTACGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGAAACAGTAGGAAAGCATCAAGAAATATTTCTTGATGTGTACAATTGAAGTGATGTTTACAATGTAGTGAAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAAAACCTATGCACGCATGTTCCTGATTTTAATAAAGCTCTGCAAAGATTTCCTTCCTCATTCTTTGCTTTTGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TTCAGCATATGTGCTGTTGCTAAGTTAAGTGTTGGTAACCCTGTGTCCTTTGTTGGGCCAAACAAGGTTAAAAT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TAAGACGAAAAAAATTTCTGAGTTCATTTCAAATGGAAGGACAACATGATACCTAACACAGAAGAGAACAAATT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TAGTTTTGACTTTCTGCCCTATGTCCACCTAAAGCTGTATTTCACTCACTCACTAATATTTAGAAATCACCCAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTGGTGGTTGGCTCTGTGCTTAGTGCTAAGAACTGGTCGTGTTATAGGTGCTGTGGGTGCGTGTCTGCGCTGGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTCAGGAGGAGGGAGCAGGCCCTGTGGGGCCCAGCAAGGCCTCCCAGGAGAAGCAGTGTGTTAGCTGAAGTTTA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATGAACTAATTGGTGGTCCTGGGATGCAGTTGGGAAGATGGGATGATTCAGCCTGTTGGGTTGAGGCTGTGAAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTGGGCAGGGTTTCAGCTGAGCTGAGGTTGGAAGTCCCTGACCTTCAGCTGTGGCCGCCTACGGAGCAGCAGGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AGAGCAAACCCATGGAGAACCCCGCGGCCCCCAAAGCATGGACGGAGCTGCCAGCCTTCTCCCCTGCCCTTCTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCTCTACTCCCGACCTGCCAGCCTTCTCCCCTGCCCTTCTGCCTCTACTCCCGACCTGCCAACCTTAGCCTAAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ATCAGAGCTGCTAGAATCACACACACTGTCGTAGCTGGTTTTGTATTGTAAATGAGTCATTCTGTTATTTTGGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AACTTATGTCTCATGCCAGGATCTGCAGATAGTTCTTTTTCAAAATATTGTTTAGACAAAATAAATTTCTTTAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATATAATATCTCTACTTTAAATGCCTGGGGTGTTGCATGCATTTTTCTAGGCTAGCAAAGCTTAAAGATTATTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CTATAATTTCAGTTACATTTACCTTTATAGATGGGTTACTCTAAGTAACAAATTAAACACACATGGATCTTCTA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 ACTTTGGCTTTAAATCCTAAGAAGAGATAGGTAATATATAAAAGAGTATTAAAAAGAAATGGAGAGTAAAGGTA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TATGTCGGGCAGATGCAGTAGAAAAGCAAGGGTCATGACGTCAATGCTGGGCAAAGCTAAATTGTGAAGACAAA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACAATAATGAAACAGGGTTATTCATCACGCTAAAGCGTACAGTCCATAGGATGATATAACTACCATGAATTTGG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCTAAATGATTGAACATTGAAACACATAAAGCGAGAACTGTAGGGGATTAAAGACAAAATCAGTGAGTGCAGTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTGGTGGGAGAGGCGCCTGGACTTCTTGGCCCCTCACAGGTCATGTGGTAGACATAAGTTGTTATTACTGTGAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCAGTAGAGACTTTCAGGTTTGATGGCTGGAAAACAAATGCTCATTTTATAAGTTTTTTTTTGTTTTGTGTTTT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTTTTGTTTTGTTTTTGAGACGGAGTTTCACTCTTGTTGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CCGCAACCTCCGCCCCTTGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGTCATGC 1850
Query 1 -----------------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTG 33
||||||||||||||||||.||||||||.|||..
Sbjct 1851 ACCACCACGCCCAGCTCATTTTGTATTTTTTTTTAGTAGAGATGGGGTTTCTCCATGTCAGTCAGGCTAGTCCT 1924
Query 34 GAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC----------------------------------- 72
.||||||.||.||||||||||||||||||||||||||||
Sbjct 1925 CAACTCCCGATCTCAGGTGATCCGCCCACCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGTGC 1998
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1999 CCGACCCTCATGGTATAAGTTTTTAAACTTAATATATACTAGCTTACAGAGGAAACCGATGTGATTTCCAAAAA 2072
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2073 TTTGAAATAATTAGAAACCTTATTCTCACATTATAATGCAATAAAAATAGAAATAAACACACAGGCGGAAACCA 2146
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2147 GGCATCCCTGGGAGTCCCTTGGGGCAGAGAAGAGCTTCGTCGCTCAAGCAAAACTTCCATGGAGGCGAGGACTG 2220
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2221 TGGGCTTTGTTGGAAGCTTTATCTCCAACCTCTAGAACACGAGCACTAAGTAGATTCTGAACAAATCTTATTAA 2294
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2295 ATGAATAAGAGCTAATAATCCTAATAAATATGTTGAAAGCACTATTCTAAGCATGTACATTTATTATGTCACTC 2368
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2369 ACTCCTCACAGTCCCTGTTCGAAGGAGGTGCTGTCCTCATCCGCATTTCACAGATGGGGGAATGGGAAGGGTAG 2442
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2443 GCTCAGTCACTTGCCCCAGAATTGACAGCTGGCAAGTGGGAGACTGAGATTCAGGCTGGGCTGTCGGACTTGGC 2516
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2517 CGTGTTCTCATGTGCAGAACCACCATTGCCTCCAAATTAATGAAAAAATGAGATAAGGTAATGGCTTAGAGTTA 2590
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2591 ATGTGTAAAGATTGTTATTAAATAAGAATCAAAAGAAGTGATTTAAACACTAAAGAGGTAGCAAAGAACCAAAG 2664
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2665 TAAGTTGAAGAATTACTGTGTTCTTTAAAGACAAAAGCAGAAATGAATCAACTAAGAAAAAGAGAGAATGAAAC 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 CAAAGAACAGGTTTTGGAAGGGGGCAGACAGCGATGAAGCGGGGAGAGTAAAGACAAGTAGACCTGGAGCCGGT 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 GTGGTGGAAAAAGGAGAGAAATCATAGCGTGTAAGAAGTAGTAATCGTCGAAGGAAGGTGAATGCAAGCGTCTT 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 GTGAATCTGAAAATGGCATTTTGTAAAATTCACTTTCCATTCCTGATTTGTAGTTTGTTTGCTTATTTGTTAAC 2960
Query 73 -------------------------------------------------------------------- 72
Sbjct 2961 TTTCTTAAATAATTTCAAAAGCATGGAAAAGTTGCAAGAATGATATAAAGAATTTAATCAAAATTTCA 3028
