Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- XR_001751322.2
- Aligned Length:
- 5311
- Identities:
- 63
- Gaps:
- 5240
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TTTTTTTCTTTTTGATACGGAATTTCGCTCTTGCTGCCCAGGCTGGAGTGCAATGGTGCGATCTCGGTTCACTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TAACCTCCGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGGCTCCCAAGTAGCTGGACTACAGGCACCCGCCA 148
Query 1 ----------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCC 40
||||||||||.||||.|.||||||||||||||.||.||||
Sbjct 149 CCACGCCCGGCTAATTTTTGTATTTTTAGTAGAGATGGGGTTTCACCATATTGGTCAGGCTGGTCTCGAGCTCC 222
Query 41 TGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------------------------------------ 72
||||||||||||||.||.||||||.| |||||
Sbjct 223 TGACCTCAGGTGATTCGACCACCTGA-CCTCCCAAAGTGCTGGGATTACAGGCGTGTGGCACTGCACCCTGACA 295
Query 73 -------------------------------------------------------------------------- 72
Sbjct 296 CAAATTTAACTTTTTAAAGGTCAGTTAACTCAGCACAAGAAGGCTACTTGATGACCTTAATAAAGTACTTTTTA 369
Query 73 -------------------------------------------------------------------------- 72
Sbjct 370 GTTAAATGCTAAGGGCCAGGTTAAAATGGATTAAAGAATGAGACCCAAAGGAACTGAATTAACAGCATATTTAA 443
Query 73 -------------------------------------------------------------------------- 72
Sbjct 444 CTTTCAGTAAGTTCTAATTCTTATCTACACCTAGGCCTTACCCTAGGCAATTCTCACCACACATCCTGGTAGTT 517
Query 73 -------------------------------------------------------------------------- 72
Sbjct 518 GGGTCGATTACATTTATTATGTTGTCTTTTTTGTAGAGACGGGGTCTCGCTATGTTGACCAGTCTAATGGACTG 591
Query 73 -------------------------------------------------------------------------- 72
Sbjct 592 CTCTGAGACGTTTGGCCTGAGGTGATCCTTCCAGGCAGGAGGATCACTTCAGGCCAGGAGACTGGGAACCAGCC 665
Query 73 -------------------------------------------------------------------------- 72
Sbjct 666 CAGTAGACTGGGCAACATAGCGAGACCCCAAGTTTAGTAAATGTGGGTGGCAGTGGACTCAAATTGTAGAATTG 739
Query 73 -------------------------------------------------------------------------- 72
Sbjct 740 GCACAGGTAAAAGCAATTATTCGCTTTTCAGAGGCACACTGTGTGGATGTGAGAACAGGCTGGCATTTCCGATA 813
Query 73 -------------------------------------------------------------------------- 72
Sbjct 814 ACAGGTCTGCGTGTTCCCAAGTCCTTGTATCCCACAACCTTCACGTAGACATCTTATCTAACTATGCTGTCCTA 887
Query 73 -------------------------------------------------------------------------- 72
Sbjct 888 CCCAACCTATAGCGTTCTTGCTCCCAGAGTCTAAATGGGAGCCCCAAACTAATTACTGTATAGTAGTCGAACTA 961
Query 73 -------------------------------------------------------------------------- 72
Sbjct 962 CACACCAGGCACTTCCCCGACAATCTACAACCCCATCCAAAGGGGTCAGAAACTAGTAACAAAATACCAGCTGC 1035
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1036 GAGCCTCTCCTTCCCCTAAAGAGATCTTATCAACTTGGCTGCACCTTCCCACCTCTAGCCTGCGGGAACAAATA 1109
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1110 TCCCAGGATCCCGGGCGGTTTCGATTGACGTTACTTCCGGGAAAAGTAACCTTGCATCGGCGGTTGCGGGCCTG 1183
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1184 GAAAGCTCTCGCGACATTTTCTCCTGCGAGATCTGCTTGCTCACTGTAGCGATGACATCCTCCTCCTCCTCCCC 1257
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1258 GCCGCCTTTCGGCAATCTTCGCCAGTCCCAGTCCCGACTAATCTGTACTCAGATGGCATGGATCAGGGTCTCCC 1331
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1332 CTCGAACCCCGGTTCGCACGGGGCGTCAGGTGGCAGCGGCGGGGTGCGAGCTGCGCGAGGCCGACGGCAGCGGC 1405
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1406 ACTACGGGTGGCCACGGGCAGGCGACGAGCAGTGAGTGTGGGCGGGGTGGGGGTAAGCCACCCGTGTAGCGGCT 1479
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1480 CGATTGTTCTGGCCTGGCTATGGCGCCTCTCCTCCCCCCCGCCATGGCTCCCCGTGTCCCTGCTCCGCTCCTCT 1553
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1554 CAGTGAGTGAAAGTGGCCGCCGCCGCCGCCGGCCCAGCGCCCGCAGCCGCCTCAGCGCCGCCGCCATCTTGGGG 1627
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1628 TCCCAGGAGCCGCGGAGGGAGCGAGCTAGGAGCGTCCACGCCCAACGCAGTCACCGTCCCACGGCCTCAGAGAG 1701
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1702 CGAACCGCGGCTCCACCGTCGGCGGGGCGACCCCCCCCTCCGGACCCCGCCCGCACCCCGCCCCCCCTCCGCCG 1775
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1776 CCGTCGCGGCGGCGGGGCCAGGCGGCCCGAGCCGTGCAGTCGGAGGTCCTTGTGCATGAAGACAGATTTGTTCT 1849
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1850 ATGGCCTCGGAGTTGGGTGCCAGGGATGATGGAGGCTGCACTGAGCTGGCAAAGCCCCTCTATCTTCAGTACTT 1923
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1924 GGAGAGGGCCCTCCGGTTGGACCATTTTCTGCGACAAACGTCAGCTATCTTCAATAGGAATATTTCTAGTGATG 1997
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1998 ACAGTGAAGATGGACTGGATGACAGTAATCCATTATTGCCCCAGTCTGGGGATCCCTTAATACAAGTTAAGGAA 2071
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2072 GAACCTCCAAATTCATTGCTTGGTGAAACTTCTGGAGCAGGCAGTTCTGGAATGTTAAACACATATTCTCTGAA 2145
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2146 TGGAGTTCTACAGTCAGAATCAAAATGTGATAAGGGGAATTTATATAATTTCTCTAAGCTGAAGAAAAGCAGAA 2219
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2220 AGTGGCTAAAGAGCATTCTGCTAAGTGATGAATCCAGCGAGGCTGATTCTCAGAGTGAAGACGATGATGAAGAA 2293
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2294 GAACTCAATCTCAGCAGAGAAGAACTTCACAACATGCTTCGACTACACAAATATAAGAAACTTCACCAAAATAA 2367
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2368 GTATAGTAAAGACAAGGAGTTGCAGCAATATCAGTACTACAGTGCAGGCCTGCTCTCCACATATGACCCTTTCT 2441
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2442 ATGAGCAACAACGGCACCTACTTGGACCCAAGAAAAAGAAATTTAAGGAGGAAAAGAAACTTAAAGCTAAGTTG 2515
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2516 AAAAAAGTGAAGAAAAAAAGACGAAGAGATGAAGAACTTTCCTCTGAAGAATCCCCTCGTCGCCATCACCACCA 2589
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2590 GACCAAAGTCTTTGCCAAGTTTTCTCACGATGCACCTCCCCCTGGCACTAAGAAAAAGCACTTATCCATTGAGC 2663
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2664 AGCTGAATGCTCGTCGCAGGAAAGTATGGCTCAGCATTGTGAAAAAGGAACTACCAAAGGCAAATAAGCAGAAA 2737
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2738 GCTTCAGCTCGTAACCTGTTTCTCACCAATAGCCGAAAGCTTGCTCACCAGTGCATGAAGGAGGTGCGTCGAGC 2811
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2812 TGCCTTGCAGGCCCAGAAGAACTGTAAGGAAACCTTGCCTCGTGCCCGCCGCCTCACCAAGGAGATGCTTCTGT 2885
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2886 ACTGGAAGAAATATGAGAAAGTAGAGAAGGAGCACCGCAAGAGAGCAGAGAAGGAAGCTTTGGAGCAGCGGAAG 2959
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2960 TTGGATGAGGAAATGCGGGAGGCCAAGAGGCAACAGCGAAAACTCAACTTCTTAATTACCCAGACAGAGTTGTA 3033
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3034 TGCCCATTTCATGAGTCGCAAACGAGATATGGGTCATGATGGTATCCAGGAAGAAATCCTAAGGAAACTGGAAG 3107
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3108 ACAGTTCTACCCAGAGACAAATCGATATAGGTGGAGGAGTGGTAGTTAACATCACACAGGAGGATTATGATAGT 3181
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3182 AACCATTTTAAAGCCCAGGCCCTGAAGAATGCTGAAAATGCTTACCATATTCACCAAGCTCGGACAAGGTCATT 3255
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3256 TGATGAAGATGCAAAAGAAAGTCGAGCAGCTGCCCTACGGGCAGCAAACAAGTCTGGCACTGGGTTTGGGGAGA 3329
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3330 GTTATAGCCTGGCTAACCCATCTATCCGGGCTGGTGAGGATATTCCACAGCCCACAATTTTTAATGGCAAATTG 3403
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3404 AAAGGTTATCAACTGAAAGGCATGAATTGGTTGGCCAATCTATATGAACAGGGTATTAATGGCATTCTTGCTGA 3477
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3478 TGAAATGGGCCTTGGTAAAACAGTACAGAGCATTGCCCTTCTGGCCCATCTGGCTGAGAGAGAGAACATTTGGG 3551
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3552 GACCTTTCTTAATAATTTCACCTGCGTCTACACTTAACAATTGGCACCAGGAGTTTACTAGATTTGTTCCTAAA 3625
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3626 TTTAAGGTGCTACCATATTGGGGAAATCCTCATGATAGAAAAGTCATCAGAAGGTTCTGGAGTCAGAAGACCCT 3699
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3700 CTACACTCAGGATGCCCCCTTCCATGTGGTTATTACCAGCTATCAGCTGGTGGTGCAGGATGTAAAGTATTTCC 3773
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3774 AGCGGGTCAAGTGGCAATACATGGTACTGGATGAGGCTCAGGCGCTCAAGAGTAGTTCCAGTGTTCGTTGGAAG 3847
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3848 ATCCTCTTACAGTTCCAGTGTCGGAATCGGCTTTTGCTAACCGGGACCCCAATTCAGAACACCATGGCAGAGCT 3921
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3922 TTGGGCTCTGCTGCATTTCATTATGCCAACATTATTTGATTCACATGAGGAATTTAATGAATGGTTTTCCAAGG 3995
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3996 ACATTGAGAGCCATGCCGAAAACAAATCTGCTATTGATGAGAATCAACTTTCTCGCTTACACATGATTTTGAAG 4069
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4070 CCATTTATGCTGAGGAGAATCAAGAAAGATGTGGAAAATGAATTATCTGACAAGATTGAGATTCTAATGTATTG 4143
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4144 CCAACTGACCAGCCGACAGAAGCTGCTATATCAGGCACTAAAGAACAAAATTTCCATTGAGGATTTATTGCAGT 4217
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4218 CTTCTATGGGCTCTACCCAACAAGCACAGAACACCACCAGCAGCCTCATGAATCTGGTCATGCAGTTTAGGAAG 4291
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4292 GTGTGTAATCACCCGGAGTTATTTGAACGGCAAGAAACTTGGTCTCCATTTCATATTTCCCTAAAGCCATACCA 4365
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4366 CATTTCAAAGTTTATCTACCGTCATGGACAGATCAGGGTCTTCAATCATTCACGAGACAGGTGGTTAAGGGTTC 4439
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4440 TTTCTCCATTTGCACCAGACTATATCCAACGGTCTCTCTTTCACAGAAAAGGTATTAATGAAGAAAGCTGTTTC 4513
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4514 TCTTTCCTTCGCTTTATTGATATATCTCCAGCAGAAATGGCAAACCTTATGCTTCAGGGACTTTTGGCCAGATG 4587
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4588 GTTAGCTCTTTTCCTGTCTCTGAAAGCCTCCTACAGGCTCCATCAGCTACGCTCCTGGGGAGCGCCAGAAGGGG 4661
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4662 AGAGCCACCAGAGATACCTGAGGAACAAGGATTTCCTTCTTGGGGTTAATTTTCCACTCTCCTTTCCAAACCTT 4735
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4736 TGCAGCTGCCCTTTGTTAAAGTCTCTTGTTTTCAGCAGCCACTGTAAAGCAGTGAGTGGCTACTCAGACCAGGT 4809
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4810 TGTCCATCAGCGGAGATCAGCTACCTCCTCGCTGCGTCGCTGCCTGCTCACTGAGCTGCCATCTTTTTTGTGTG 4883
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4884 TGGCCAGTCCACGAGTTACCGCAGTGCCATTGGATTCTTACTGCAATGACCGAAGTGCAGAATATGAAAGGCGA 4957
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4958 GTTCTGAAGGAAGGAGGGAGTCTGGCAGCCAAGCAGTGTTTGTTGAATGGGGCCCCTGAACTGGCTGCAGACTG 5031
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5032 GCTAAATAGACGATCACAGTTCTTCCCAGAGCCAGCTGGAGGTCTGTGGAGCATCAGACCTCAGAATGGCTGGT 5105
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5106 CTTTCATCAGGATTCCAGGAATACATGGTTTACAGGAAGCATACCTACATGAGGCTTGATGGCTCATCCAAGAT 5179
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5180 CTCGGAGAGGCGAGACATGGTTGCTGATTTTCAGAACAGGACATCTGAGATTGTTAAGGAATCAAGATGTAATT 5253
Query 73 --------------------------------------------------------- 72
Sbjct 5254 CCTGCCATTTTAAGAAGTTACTAAATCTGCTTATCATAATTCAGATCTATGTGTCTG 5310
