Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10261
Subject:
XR_001751414.1
Aligned Length:
5032
Identities:
64
Gaps:
4962

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AAGGTAAAAGCTGCTTCCTGTTGGGGCATGAGTCCGGCGCGTGTCGGGTTTTGAGCTGCCGCGGTCCCGGGACT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAGCTCCTTGGGAGCAGACAGCTGTCCTCACTGGCAGAGGAGGAGCGCTCAGTAAATGCTCGCTGGACGAATAA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ATGGCTAGATAAGATAAGGCAGCTCCAGCCCCTGGAAGGCCAGAGACTTGCCAGTGTCCCACTAGCGGGCTCTT  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CGCAAGAATCCCCCCGGGCCCGCCGCAGCCAGGCGGCGGCCGGCAGAGGGCGCTGCTCGGGCATGGCGGAGGAG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CGGCCGGGGGCCTGGTTCGGCTTCGGTTTCTGCGGCTTCGGGCAGGAGCTGGGCTCCGGACGCGGGCGCCAGGT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCACAGCCCCAGTCCGCTGCGGGCGGGCGTCGACATCTGCCGCGTGAGCGCGAGCTGGAGCTACACCGCTTTCG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TGACCCGTGGAGGCCGCTTGGAGCTGTCGGGCTCAGCCAGCGGCGCGGCGGGCCGCTGCAAGGACGCGTGGGCC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TCGGAGGGGCTCCTCGCGGTGCTGCGCGCCGGGCCGGGGCCGGAGGCGTTACTGCAGGTCTGGGCGGCCGAATC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GGCGCTGCGTGGGGAGCCATTGTGGGCCCAGAATGTGGTGCCCGAGGCCGAAGGGGAAGACGATCCGGCCGGTG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AGGCCCAGGCTGGGAGGCTACCCCTGCTGCCCTGCGCCCGTGCCTACGTGAGCCCGCGGGCGCCCTTCTACCGG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CCTCTGGCTCCGGAGCTGCGGGCACGCCAGCTGGAGCTGGGCGCCGAGCACGCGTTGCTGCTGGACGCTGCTGG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CCAGGTGTTCTCCTGGGGCGGGGGCAGGCATGGACAGCTGGGCCATGGGACCCTGGAGGCAGAGCTGGAGCCAC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GGCTGTTGGAGGCGTTGCAGGGCCTAGTCATGGCTGAGGTGGCCGCGGGGGGCTGGCATTCTGTGTGTGTGAGT  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GAGACTGGGGATATTTATATCTGGGGCTGGAATGAATCAGGGCAGCTGGCCCTGCCCACCAGGAACCTGGCAGA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GGATGGAGAGACTGTCGCAAGGGAAGCCACAGAACTGAATGAAGATGGTTCTCAGGTGAAGAGAACGGGTGGGG  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CTGAGGATGGAGCCCCTGCCCCCTTCATAGCTGTCCAGCCCTTCCCGGCATTACTGGATCTCCCCATGGGCTCA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GATGCAGTCAAGGCCAGCTGTGGATCCCGGCACACAGCTGTGGTGACACGTGAGTGGGGCTGGGAGGCACTCTG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CTCCACTCGAGCTGGTGCCTACGGAAGGGGGTGTGGTCGACGGAAAAACTTCTGTCTTAAGGCTTCTGTGGCTC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ATACAGAGCAGCTACCTTGCTCAGTGGATAAGCCCCAACCCCCTTGTTGTTTCACAGTAGTTCCCCAGCCTGTC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AGGCCCAGAAGTTTCTTCCTTCTGGTGGGAGGCTGATGCTTTCTGTCCTCCCTGCACGGCCACAGACACATTCC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CTGCCCGCCGCCGCCTCTGACAGCAGGGACTGTCCAGTCTGGCATGGAAGACTGCGGCGCTCGGTAGCATGGCA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CACAGGAAGATCCGCCACTTTTTCCCTCGGGATCCTCTGCCATGCCACGTGTGATCAGCCAGTTGTTAAGAGAA  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TATGTTGTTCCATGCCAGGCAGATCTCATGAGGATTGTAATATGCTAGCTGTGGGCTGTGCCAAGCTGGGCTGG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  ACAGATGCCTTGCCAAAGAACCGTAGTGACAACTATCGATTGTCCTTTTGCTTTCAGGAACAGGGGAGCTCTAC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  ACCTGGGGCTGGGGTAAATATGGACAGCTGGGCCACGAGGACACCACCAGCTTGGATCGGCCTCGCCGTGTGGA  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  ATACTTTGTAGATAAGCAACTCCAAGTAAAGGCTGTCACCTGTGGGCCGTGGAACACCTACGTGTATGCTGTGG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  AGAAAGGGAAGAGCTGACATGTGTACGTATATGTATATGCAACACCTGTGAGACCCCCATTCAGGTCAAGGAAA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  ACCATTGCCTGCACCCCAAGGGCCCCATATTTGCCCCTCCCCATCACAGTCCTGCCCTTCACCCTCAAGCACGG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TCCTAAACTTGTCTGCACTTTAGAAACACCTGGAGAGCATTGAAAACTCTGCTGCCTAAGGTCAGCATCAATCA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  AAACAATGAAATCAATGAAACAATGAAACCAGAGCTTCTAGGTGTGTGGCCTGGATAGTGGTAGATTCAAAGCT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CCACCCACCTCATCCCAGGTACATTTGATGTGCAGCTGAGATTGGGGCACATTCCAGGTCATCGTCTTCTGTCA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  GTCATTTCCCTGCTTTCGTTTGAATTTTACCATTCTTGTATGCAGCCTTATACGACATAGTTGTGTTTGCTTTT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GAGTGTTAGATAAATGGAATCCTGTGTATGTGCTTTTGTGTCGTTTTTGTCACTCAGCATTGTATAATCCATCC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  TTGTTGGGTCCTGGAGTTCATTTTTAATGCTATATGGTGTTCTGTTGTATGAATAATACCTCAAGTGATACAGC  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  CTTGTTGATGGTCATTTTTATTGTTTCTGATTTTGGTCATTCCACATAATTCTTTGTGCAGTCTTCTGCACATG  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TGCACAAGTTCCTTTGCAGAACATTGAGTTGAATTGCTAAGTCAGGAGATACCTTTAATTTTACTAGATAACTG  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  TTGCCCCCAGCAGGGTGGGGTCTACTGTGGCTAAAATGTCAGGTAGATGCACACTGGTTTTAATTGGCATTTCC  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  CTGGATACTGATGAGGTTGAGTAGCTTTTCATTTGTTTTGGATGGCTGGGCATGGTGGCTCACACCTGTAGTCC  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  CAGCACTTTGGGAGGCTAAGCAGGGAGATTGCTTGAGGCGAAGAGTTCATATGTTTATTGGCCACTTGGAGTTT  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  TTCTGTTGTCAAGTGCCTGTTCAAGTTTTCTGGCCTTTTAAAATGTTCTGTATTTTCCTTAGTGATTTTTCTTT  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  TGGATATTTCAGATACAAGTCTTTTGAGAGTTAGTATTCAGAGTATCTTCTGCTACAATGTAGTTTGTTTCAGT  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  CTCTCTTGGTATTACCAATTTTAATACTTAGGTGATGCTTACTCCATGCCAGGTAAGGCTCAAAGTGCTTTACA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  AGTATCAACTTATTTTGATAAAATAAGCTTATCAGTAGTTTTCTTTATAGTTAAATTCTATTTGTGCATGTGTG  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  TGTCTGTGGTTTAGCAAATGTTTCCCACCCATGGGGTCTTTTTTATTGTGGTAAAATATACTGAACATAAAATT  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  TATGTTCAATAAAAAACAAAAATTGTTTTTAACCATTTTAAGTACATAGTTCAGTGACATTATATGCATTCACT  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  GTTGTGCAACCGTCACCCCTATGCATTTCCAGAACTTTTTCATCATTCTATGCTGAAACTCTGTGCATTAAACA  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  CTTAACTCGTCAGTCTCCCCTTCCCCAGCCCCAGGCAACCACAGTCCTAACCTTCTGTTCCTATGATACTGTAA  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  GTGCCTCATGTAAGTGAAATCCCATAGTATTTGTCTTTTTATGACTGGCTTATCTCACTTAGCAGCATGTCCTC  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  CAAGTTCATCCATGATGTAGCTTATGTATCTAGACTTCCTGCCTTTTAAAGGCTAAGATTCTGTTGTATGTATA  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  CACTGCGTTTTATTCATCCGTGCATTGGTGGATATCTGAGTTGTTCACTACAGTCAATAATGTTGCTGGGAACA  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  TGGGTGTACAACTCTCTTGAGTCTCTGCTTTCAGTTCTTTTGGATATATACCCAGAGTGGAATTGCTGGATTGT  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  GTGGTAATTCTAAATTTTTTTGAGGAACTGCCCTGTTTCCCACAGAGGCTGCATCATTTTACATCCCCACTGGA  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  AGTGCACACAAATCCTAATTTCTCCACATCCGCGTCCACACTTGTTTTCTATTTCTGGTTAACAGCCATCCTAA  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  TGGGTGTGAAGTGGTATTTCATTGTGGGTTTTTTTTTTTTTTTTTGGACAGGGTCTCTCTGTTGTCCAGGCTGG  3996

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3997  AGTACAGCCTCCACCTTCTGGGCTTAAGCCATCCTCCCGGGTAGCTGGGGCTACAGGCACGTGCCACCACATCT  4070

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4071  GGCTAGTTTTTTGTATTTTTAGTAGAGATGGGGTTGTTGCATATTGCCCAGGCTGGTCTCAAACTGCTGGGCTG  4144

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4145  AAGCGATCCACTTGCCTTAGCCTCCCAAAGTACTAGGATTATAGGCATGAGCCATCATGCCTGGCCAAGCCATT  4218

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4219  TTTTAAAATGGACAAAAGTCAACAAAGACGACAGAAGGATAGCAAGTGAGCATATGAGAAGATGCTCTACATCA  4292

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4293  TTAGTCATTAGGGAGTTGTAAATGAAAACCATAGTGAGACACCACTCCATACACAGAATAACTAGAATTACATA  4366

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4367  AAGGCTGAACATACCAACTGTTGGTGAAGATGTGGAGAAACTGGAACCTTCATACATTACTGGTAGGAATGTAA  4440

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4441  AATGGTACAACTGCTTTGGAAAACAGTTTGGCATTTCTTCTTTTTTAAGATGGAGTCTTGCTCTGTTGCCCAGG  4514

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4515  CTAGAGTGCAGTGGTGCAATCTCAGCTCACTGCCACTTCCGCCTCCTGAGTTCAAGGAATTCTCCTTCCTCAGC  4588

Query    1  -------------------------------------------------------------------ATGGGGT  7
                                                                               |||||||
Sbjct 4589  CTCCTGAATAGCTGAGATTACAGGTGTGTGCCACCACAGCCAGCTAATTTTTGTATTTTTAGTAGAGATGGGGT  4662

Query    8  TTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC---------  72
            |||.||||||.||.|||||||||||.||||||||||||||  ||||||.||||||||.|||||||         
Sbjct 4663  TTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTC--GTGATCTGCCCACCTTAGCCTCCCAAAGTGCT  4734

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4735  GGGATTACAGGCGTGAGCCACCATGCCCGGCCCAGTTTGGCATTTCTTAAAAAGTTAAGTGTACACATACCATA  4808

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4809  GATGTGATCCAGCCATTTCACTCCTAGGTATTTATCCAGAAAAAAAAATATATCCATACAAAGACTTGTACATG  4882

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4883  AATGTTTATAACAGCCTTGTTTTTAATAGCCAAAAACTGGAGAAAAGCCAAATGTGAAAAATAAACCTAACAGG  4956

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4957  CGAATAAACTGGTATATCAACACCATGGAATACTAAGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA  5030

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