Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10261
Subject:
XR_001751416.1
Aligned Length:
5055
Identities:
64
Gaps:
4985

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CCTTTCCGGAGGCGGCCGCTCTGCGCCTCGGCGTTTCCTCCAAGGCTGCCCACCAGAAGGACCTGCCCGAGAGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTAGAGGGCATAGGGTCAAGATCAAGCTCCTTGGGAGCAGACAGCTGTCCTCACTGGCAGAGGAGGAGCGCTCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GTAAATGCTCGCTGGACGAATAAATGGCTAGATAAGATAAGGCAGCTCCAGCCCCTGGAAGGCCAGAGACTTGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CAGTGTCCCACTAGCGGGCTCTTCGCAAGAATCCCCCCGGGCCCGCCGCAGCCAGGCGGCGGCCGGCAGAGGGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GCTGCTCGGGCATGGCGGAGGAGCGGCCGGGGGCCTGGTTCGGCTTCGGTTTCTGCGGCTTCGGGCAGGAGCTG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GGCTCCGGACGCGGGCGCCAGGTGCACAGCCCCAGTCCGCTGCGGGCGGGCGTCGACATCTGCCGCGTGAGCGC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GAGCTGGAGCTACACCGCTTTCGTGACCCGTGGAGGCCGCTTGGAGCTGTCGGGCTCAGCCAGCGGCGCGGCGG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GCCGCTGCAAGGACGCGTGGGCCTCGGAGGGGCTCCTCGCGGTGCTGCGCGCCGGGCCGGGGCCGGAGGCGTTA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CTGCAGGTCTGGGCGGCCGAATCGGCGCTGCGTGGGGAGCCATTGTGGGCCCAGAATGTGGTGCCCGAGGCCGA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AGGGGAAGACGATCCGGCCGGTGAGGCCCAGGCTGGGAGGCTACCCCTGCTGCCCTGCGCCCGTGCCTACGTGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GCCCGCGGGCGCCCTTCTACCGGCCTCTGGCTCCGGAGCTGCGGGCACGCCAGCTGGAGCTGGGCGCCGAGCAC  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GCGTTGCTGCTGGACGCTGCTGGCCAGGTGTTCTCCTGGGGCGGGGGCAGGCATGGACAGCTGGGCCATGGGAC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CCTGGAGGCAGAGCTGGAGCCACGGCTGTTGGAGGCGTTGCAGGGCCTAGTCATGGCTGAGGTGGCCGCGGGGG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GCTGGCATTCTGTGTGTGTGAGTGAGACTGGGGATATTTATATCTGGGGCTGGAATGAATCAGGGCAGCTGGCC  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CTGCCCACCAGGAACCTGGCAGAGGATGGAGAGACTGTCGCAAGGGAAGCCACAGAACTGAATGAAGATGGTTC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TCAGGTGAAGAGAACGGGTGGGGCTGAGGATGGAGCCCCTGCCCCCTTCATAGCTGTCCAGCCCTTCCCGGCAT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TACTGGATCTCCCCATGGGCTCAGATGCAGTCAAGGCCAGCTGTGGATCCCGGCACACAGCTGTGGTGACACGT  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GAGTGGGGCTGGGAGGCACTCTGCTCCACTCGAGCTGGTGCCTACGGAAGGGGGTGTGGTCGACGGAAAAACTT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CTGTCTTAAGGCTTCTGTGGCTCATACAGAGCAGCTACCTTGCTCAGTGGATAAGCCCCAACCCCCTTGTTGTT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  TCACAGTAGTTCCCCAGCCTGTCAGGCCCAGAAGTTTCTTCCTTCTGGTGGGAGGCTGATGCTTTCTGTCCTCC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CTGCACGGCCACAGACACATTCCCTGCCCGCCGCCGCCTCTGACAGCAGGGACTGTCCAGTCTGGCATGGAAGA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  CTGCGGCGCTCGGTAGCATGGCACACAGGAAGATCCGCCACTTTTTCCCTCGGGATCCTCTGCCATGCCACGTG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TGATCAGCCAGTTGTTAAGAGAATATGTTGTTCCATGCCAGGCAGATCTCATGAGGATTGTAATATGCTAGCTG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  TGGGCTGTGCCAAGCTGGGCTGGACAGATGCCTTGCCAAAGAACCGTAGTGACAACTATCGATTGTCCTTTTGC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TTTCAGGAACAGGGGAGCTCTACACCTGGGGCTGGGGTAAATATGGACAGCTGGGCCACGAGGACACCACCAGC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  TTGGATCGGCCTCGCCGTGTGGAATACTTTGTAGATAAGCAACTCCAAGTAAAGGCTGTCACCTGTGGGCCGTG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  GAACACCTACGTGTATGCTGTGGAGAAAGGGAAGAGCTGACATGTGTACGTATATGTATATGCAACACCTGTGA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  GACCCCCATTCAGGTCAAGGAAAACCATTGCCTGCACCCCAAGGGCCCCATATTTGCCCCTCCCCATCACAGTC  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  CTGCCCTTCACCCTCAAGCACGGTCCTAAACTTGTCTGCACTTTAGAAACACCTGGAGAGCATTGAAAACTCTG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  CTGCCTAAGGTCAGCATCAATCAAAACAATGAAATCAATGAAACAATGAAACCAGAGCTTCTAGGTGTGTGGCC  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TGGATAGTGGTAGATTCAAAGCTCCACCCACCTCATCCCAGGTACATTTGATGTGCAGCTGAGATTGGGGCACA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TTCCAGGTCATCGTCTTCTGTCAGTCATTTCCCTGCTTTCGTTTGAATTTTACCATTCTTGTATGCAGCCTTAT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  ACGACATAGTTGTGTTTGCTTTTGAGTGTTAGATAAATGGAATCCTGTGTATGTGCTTTTGTGTCGTTTTTGTC  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  ACTCAGCATTGTATAATCCATCCTTGTTGGGTCCTGGAGTTCATTTTTAATGCTATATGGTGTTCTGTTGTATG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  AATAATACCTCAAGTGATACAGCCTTGTTGATGGTCATTTTTATTGTTTCTGATTTTGGTCATTCCACATAATT  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  CTTTGTGCAGTCTTCTGCACATGTGCACAAGTTCCTTTGCAGAACATTGAGTTGAATTGCTAAGTCAGGAGATA  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  CCTTTAATTTTACTAGATAACTGTTGCCCCCAGCAGGGTGGGGTCTACTGTGGCTAAAATGTCAGGTAGATGCA  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  CACTGGTTTTAATTGGCATTTCCCTGGATACTGATGAGGTTGAGTAGCTTTTCATTTGTTTTGGATGGCTGGGC  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  ATGGTGGCTCACACCTGTAGTCCCAGCACTTTGGGAGGCTAAGCAGGGAGATTGCTTGAGGCGAAGAGTTCATA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  TGTTTATTGGCCACTTGGAGTTTTTCTGTTGTCAAGTGCCTGTTCAAGTTTTCTGGCCTTTTAAAATGTTCTGT  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  ATTTTCCTTAGTGATTTTTCTTTTGGATATTTCAGATACAAGTCTTTTGAGAGTTAGTATTCAGAGTATCTTCT  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  GCTACAATGTAGTTTGTTTCAGTCTCTCTTGGTATTACCAATTTTAATACTTAGGTGATGCTTACTCCATGCCA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  GGTAAGGCTCAAAGTGCTTTACAAGTATCAACTTATTTTGATAAAATAAGCTTATCAGTAGTTTTCTTTATAGT  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  TAAATTCTATTTGTGCATGTGTGTGTCTGTGGTTTAGCAAATGTTTCCCACCCATGGGGTCTTTTTTATTGTGG  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  TAAAATATACTGAACATAAAATTTATGTTCAATAAAAAACAAAAATTGTTTTTAACCATTTTAAGTACATAGTT  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  CAGTGACATTATATGCATTCACTGTTGTGCAACCGTCACCCCTATGCATTTCCAGAACTTTTTCATCATTCTAT  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  GCTGAAACTCTGTGCATTAAACACTTAACTCGTCAGTCTCCCCTTCCCCAGCCCCAGGCAACCACAGTCCTAAC  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  CTTCTGTTCCTATGATACTGTAAGTGCCTCATGTAAGTGAAATCCCATAGTATTTGTCTTTTTATGACTGGCTT  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  ATCTCACTTAGCAGCATGTCCTCCAAGTTCATCCATGATGTAGCTTATGTATCTAGACTTCCTGCCTTTTAAAG  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  GCTAAGATTCTGTTGTATGTATACACTGCGTTTTATTCATCCGTGCATTGGTGGATATCTGAGTTGTTCACTAC  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  AGTCAATAATGTTGCTGGGAACATGGGTGTACAACTCTCTTGAGTCTCTGCTTTCAGTTCTTTTGGATATATAC  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  CCAGAGTGGAATTGCTGGATTGTGTGGTAATTCTAAATTTTTTTGAGGAACTGCCCTGTTTCCCACAGAGGCTG  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  CATCATTTTACATCCCCACTGGAAGTGCACACAAATCCTAATTTCTCCACATCCGCGTCCACACTTGTTTTCTA  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  TTTCTGGTTAACAGCCATCCTAATGGGTGTGAAGTGGTATTTCATTGTGGGTTTTTTTTTTTTTTTTTGGACAG  3996

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3997  GGTCTCTCTGTTGTCCAGGCTGGAGTACAGCCTCCACCTTCTGGGCTTAAGCCATCCTCCCGGGTAGCTGGGGC  4070

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4071  TACAGGCACGTGCCACCACATCTGGCTAGTTTTTTGTATTTTTAGTAGAGATGGGGTTGTTGCATATTGCCCAG  4144

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4145  GCTGGTCTCAAACTGCTGGGCTGAAGCGATCCACTTGCCTTAGCCTCCCAAAGTACTAGGATTATAGGCATGAG  4218

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4219  CCATCATGCCTGGCCAAGCCATTTTTTAAAATGGACAAAAGTCAACAAAGACGACAGAAGGATAGCAAGTGAGC  4292

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4293  ATATGAGAAGATGCTCTACATCATTAGTCATTAGGGAGTTGTAAATGAAAACCATAGTGAGACACCACTCCATA  4366

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4367  CACAGAATAACTAGAATTACATAAAGGCTGAACATACCAACTGTTGGTGAAGATGTGGAGAAACTGGAACCTTC  4440

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4441  ATACATTACTGGTAGGAATGTAAAATGGTACAACTGCTTTGGAAAACAGTTTGGCATTTCTTCTTTTTTAAGAT  4514

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4515  GGAGTCTTGCTCTGTTGCCCAGGCTAGAGTGCAGTGGTGCAATCTCAGCTCACTGCCACTTCCGCCTCCTGAGT  4588

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4589  TCAAGGAATTCTCCTTCCTCAGCCTCCTGAATAGCTGAGATTACAGGTGTGTGCCACCACAGCCAGCTAATTTT  4662

Query    1  ----------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGC  58
                            ||||||||||.||||||.||.|||||||||||.||||||||||||||  ||||||.||
Sbjct 4663  TGTATTTTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTC--GTGATCTGC  4734

Query   59  CCACCTCAGCCTCC------------------------------------------------------------  72
            ||||||.|||||||                                                            
Sbjct 4735  CCACCTTAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCCGGCCCAGTTTGGCATTTCTTAAA  4808

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4809  AAGTTAAGTGTACACATACCATAGATGTGATCCAGCCATTTCACTCCTAGGTATTTATCCAGAAAAAAAAATAT  4882

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4883  ATCCATACAAAGACTTGTACATGAATGTTTATAACAGCCTTGTTTTTAATAGCCAAAAACTGGAGAAAAGCCAA  4956

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4957  ATGTGAAAAATAAACCTAACAGGCGAATAAACTGGTATATCAACACCATGGAATACTAAGCAAAAAAAAAAAAA  5030

Query   73  -----------------------  72
                                   
Sbjct 5031  AAAAAAAAAAAAAAAAAAAAAAA  5053

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