Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10261
Subject:
XR_001751417.1
Aligned Length:
4971
Identities:
64
Gaps:
4901

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CCTTTCCGGAGGCGGCCGCTCTGCGCCTCGGCGTTTCCTCCAAGGCTGCCCACCAGAAGGACCTGCCCGAGAGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GTAGAGGGCATAGGGTCAAGATCAAGATAAGGCAGCTCCAGCCCCTGGAAGGCCAGAGACTTGCCAGTGTCCCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CTAGCGGGCTCTTCGCAAGAATCCCCCCGGGCCCGCCGCAGCCAGGCGGCGGCCGGCAGAGGGCGCTGCTCGGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CATGGCGGAGGAGCGGCCGGGGGCCTGGTTCGGCTTCGGTTTCTGCGGCTTCGGGCAGGAGCTGGGCTCCGGAC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GCGGGCGCCAGGTGCACAGCCCCAGTCCGCTGCGGGCGGGCGTCGACATCTGCCGCGTGAGCGCGAGCTGGAGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TACACCGCTTTCGTGACCCGTGGAGGCCGCTTGGAGCTGTCGGGCTCAGCCAGCGGCGCGGCGGGCCGCTGCAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GGACGCGTGGGCCTCGGAGGGGCTCCTCGCGGTGCTGCGCGCCGGGCCGGGGCCGGAGGCGTTACTGCAGGTCT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  GGGCGGCCGAATCGGCGCTGCGTGGGGAGCCATTGTGGGCCCAGAATGTGGTGCCCGAGGCCGAAGGGGAAGAC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GATCCGGCCGGTGAGGCCCAGGCTGGGAGGCTACCCCTGCTGCCCTGCGCCCGTGCCTACGTGAGCCCGCGGGC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GCCCTTCTACCGGCCTCTGGCTCCGGAGCTGCGGGCACGCCAGCTGGAGCTGGGCGCCGAGCACGCGTTGCTGC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TGGACGCTGCTGGCCAGGTGTTCTCCTGGGGCGGGGGCAGGCATGGACAGCTGGGCCATGGGACCCTGGAGGCA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GAGCTGGAGCCACGGCTGTTGGAGGCGTTGCAGGGCCTAGTCATGGCTGAGGTGGCCGCGGGGGGCTGGCATTC  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TGTGTGTGTGAGTGAGACTGGGGATATTTATATCTGGGGCTGGAATGAATCAGGGCAGCTGGCCCTGCCCACCA  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  GGAACCTGGCAGAGGATGGAGAGACTGTCGCAAGGGAAGCCACAGAACTGAATGAAGATGGTTCTCAGGTGAAG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGAACGGGTGGGGCTGAGGATGGAGCCCCTGCCCCCTTCATAGCTGTCCAGCCCTTCCCGGCATTACTGGATCT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CCCCATGGGCTCAGATGCAGTCAAGGCCAGCTGTGGATCCCGGCACACAGCTGTGGTGACACGTGAGTGGGGCT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GGGAGGCACTCTGCTCCACTCGAGCTGGTGCCTACGGAAGGGGGTGTGGTCGACGGAAAAACTTCTGTCTTAAG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GCTTCTGTGGCTCATACAGAGCAGCTACCTTGCTCAGTGGATAAGCCCCAACCCCCTTGTTGTTTCACAGTAGT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TCCCCAGCCTGTCAGGCCCAGAAGTTTCTTCCTTCTGGTGGGAGGCTGATGCTTTCTGTCCTCCCTGCACGGCC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  ACAGACACATTCCCTGCCCGCCGCCGCCTCTGACAGCAGGGACTGTCCAGTCTGGCATGGAAGACTGCGGCGCT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CGGTAGCATGGCACACAGGAAGATCCGCCACTTTTTCCCTCGGGATCCTCTGCCATGCCACGTGTGATCAGCCA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GTTGTTAAGAGAATATGTTGTTCCATGCCAGGCAGATCTCATGAGGATTGTAATATGCTAGCTGTGGGCTGTGC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CAAGCTGGGCTGGACAGATGCCTTGCCAAAGAACCGTAGTGACAACTATCGATTGTCCTTTTGCTTTCAGGAAC  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  AGGGGAGCTCTACACCTGGGGCTGGGGTAAATATGGACAGCTGGGCCACGAGGACACCACCAGCTTGGATCGGC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  CTCGCCGTGTGGAATACTTTGTAGATAAGCAACTCCAAGTAAAGGCTGTCACCTGTGGGCCGTGGAACACCTAC  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GTGTATGCTGTGGAGAAAGGGAAGAGCTGACATGTGTACGTATATGTATATGCAACACCTGTGAGACCCCCATT  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CAGGTCAAGGAAAACCATTGCCTGCACCCCAAGGGCCCCATATTTGCCCCTCCCCATCACAGTCCTGCCCTTCA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CCCTCAAGCACGGTCCTAAACTTGTCTGCACTTTAGAAACACCTGGAGAGCATTGAAAACTCTGCTGCCTAAGG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  TCAGCATCAATCAAAACAATGAAATCAATGAAACAATGAAACCAGAGCTTCTAGGTGTGTGGCCTGGATAGTGG  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TAGATTCAAAGCTCCACCCACCTCATCCCAGGTACATTTGATGTGCAGCTGAGATTGGGGCACATTCCAGGTCA  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  TCGTCTTCTGTCAGTCATTTCCCTGCTTTCGTTTGAATTTTACCATTCTTGTATGCAGCCTTATACGACATAGT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TGTGTTTGCTTTTGAGTGTTAGATAAATGGAATCCTGTGTATGTGCTTTTGTGTCGTTTTTGTCACTCAGCATT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GTATAATCCATCCTTGTTGGGTCCTGGAGTTCATTTTTAATGCTATATGGTGTTCTGTTGTATGAATAATACCT  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  CAAGTGATACAGCCTTGTTGATGGTCATTTTTATTGTTTCTGATTTTGGTCATTCCACATAATTCTTTGTGCAG  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TCTTCTGCACATGTGCACAAGTTCCTTTGCAGAACATTGAGTTGAATTGCTAAGTCAGGAGATACCTTTAATTT  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  TACTAGATAACTGTTGCCCCCAGCAGGGTGGGGTCTACTGTGGCTAAAATGTCAGGTAGATGCACACTGGTTTT  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  AATTGGCATTTCCCTGGATACTGATGAGGTTGAGTAGCTTTTCATTTGTTTTGGATGGCTGGGCATGGTGGCTC  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  ACACCTGTAGTCCCAGCACTTTGGGAGGCTAAGCAGGGAGATTGCTTGAGGCGAAGAGTTCATATGTTTATTGG  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  CCACTTGGAGTTTTTCTGTTGTCAAGTGCCTGTTCAAGTTTTCTGGCCTTTTAAAATGTTCTGTATTTTCCTTA  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  GTGATTTTTCTTTTGGATATTTCAGATACAAGTCTTTTGAGAGTTAGTATTCAGAGTATCTTCTGCTACAATGT  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  AGTTTGTTTCAGTCTCTCTTGGTATTACCAATTTTAATACTTAGGTGATGCTTACTCCATGCCAGGTAAGGCTC  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  AAAGTGCTTTACAAGTATCAACTTATTTTGATAAAATAAGCTTATCAGTAGTTTTCTTTATAGTTAAATTCTAT  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  TTGTGCATGTGTGTGTCTGTGGTTTAGCAAATGTTTCCCACCCATGGGGTCTTTTTTATTGTGGTAAAATATAC  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  TGAACATAAAATTTATGTTCAATAAAAAACAAAAATTGTTTTTAACCATTTTAAGTACATAGTTCAGTGACATT  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  ATATGCATTCACTGTTGTGCAACCGTCACCCCTATGCATTTCCAGAACTTTTTCATCATTCTATGCTGAAACTC  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  TGTGCATTAAACACTTAACTCGTCAGTCTCCCCTTCCCCAGCCCCAGGCAACCACAGTCCTAACCTTCTGTTCC  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  TATGATACTGTAAGTGCCTCATGTAAGTGAAATCCCATAGTATTTGTCTTTTTATGACTGGCTTATCTCACTTA  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  GCAGCATGTCCTCCAAGTTCATCCATGATGTAGCTTATGTATCTAGACTTCCTGCCTTTTAAAGGCTAAGATTC  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  TGTTGTATGTATACACTGCGTTTTATTCATCCGTGCATTGGTGGATATCTGAGTTGTTCACTACAGTCAATAAT  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  GTTGCTGGGAACATGGGTGTACAACTCTCTTGAGTCTCTGCTTTCAGTTCTTTTGGATATATACCCAGAGTGGA  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  ATTGCTGGATTGTGTGGTAATTCTAAATTTTTTTGAGGAACTGCCCTGTTTCCCACAGAGGCTGCATCATTTTA  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  CATCCCCACTGGAAGTGCACACAAATCCTAATTTCTCCACATCCGCGTCCACACTTGTTTTCTATTTCTGGTTA  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  ACAGCCATCCTAATGGGTGTGAAGTGGTATTTCATTGTGGGTTTTTTTTTTTTTTTTTGGACAGGGTCTCTCTG  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  TTGTCCAGGCTGGAGTACAGCCTCCACCTTCTGGGCTTAAGCCATCCTCCCGGGTAGCTGGGGCTACAGGCACG  3996

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3997  TGCCACCACATCTGGCTAGTTTTTTGTATTTTTAGTAGAGATGGGGTTGTTGCATATTGCCCAGGCTGGTCTCA  4070

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4071  AACTGCTGGGCTGAAGCGATCCACTTGCCTTAGCCTCCCAAAGTACTAGGATTATAGGCATGAGCCATCATGCC  4144

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4145  TGGCCAAGCCATTTTTTAAAATGGACAAAAGTCAACAAAGACGACAGAAGGATAGCAAGTGAGCATATGAGAAG  4218

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4219  ATGCTCTACATCATTAGTCATTAGGGAGTTGTAAATGAAAACCATAGTGAGACACCACTCCATACACAGAATAA  4292

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4293  CTAGAATTACATAAAGGCTGAACATACCAACTGTTGGTGAAGATGTGGAGAAACTGGAACCTTCATACATTACT  4366

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4367  GGTAGGAATGTAAAATGGTACAACTGCTTTGGAAAACAGTTTGGCATTTCTTCTTTTTTAAGATGGAGTCTTGC  4440

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4441  TCTGTTGCCCAGGCTAGAGTGCAGTGGTGCAATCTCAGCTCACTGCCACTTCCGCCTCCTGAGTTCAAGGAATT  4514

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4515  CTCCTTCCTCAGCCTCCTGAATAGCTGAGATTACAGGTGTGTGCCACCACAGCCAGCTAATTTTTGTATTTTTA  4588

Query    1  ------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGC  68
                  ||||||||||.||||||.||.|||||||||||.||||||||||||||  ||||||.||||||||.|||
Sbjct 4589  GTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTC--GTGATCTGCCCACCTTAGC  4660

Query   69  CTCC----------------------------------------------------------------------  72
            ||||                                                                      
Sbjct 4661  CTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCCGGCCCAGTTTGGCATTTCTTAAAAAGTTAAGTG  4734

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4735  TACACATACCATAGATGTGATCCAGCCATTTCACTCCTAGGTATTTATCCAGAAAAAAAAATATATCCATACAA  4808

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4809  AGACTTGTACATGAATGTTTATAACAGCCTTGTTTTTAATAGCCAAAAACTGGAGAAAAGCCAAATGTGAAAAA  4882

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4883  TAAACCTAACAGGCGAATAAACTGGTATATCAACACCATGGAATACTAAGCAAAAAAAAAAAAAAAAAAAAAAA  4956

Query   73  -------------  72
                         
Sbjct 4957  AAAAAAAAAAAAA  4969

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