Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- XR_001751417.1
- Aligned Length:
- 4971
- Identities:
- 64
- Gaps:
- 4901
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCTTTCCGGAGGCGGCCGCTCTGCGCCTCGGCGTTTCCTCCAAGGCTGCCCACCAGAAGGACCTGCCCGAGAGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTAGAGGGCATAGGGTCAAGATCAAGATAAGGCAGCTCCAGCCCCTGGAAGGCCAGAGACTTGCCAGTGTCCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTAGCGGGCTCTTCGCAAGAATCCCCCCGGGCCCGCCGCAGCCAGGCGGCGGCCGGCAGAGGGCGCTGCTCGGG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CATGGCGGAGGAGCGGCCGGGGGCCTGGTTCGGCTTCGGTTTCTGCGGCTTCGGGCAGGAGCTGGGCTCCGGAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCGGGCGCCAGGTGCACAGCCCCAGTCCGCTGCGGGCGGGCGTCGACATCTGCCGCGTGAGCGCGAGCTGGAGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TACACCGCTTTCGTGACCCGTGGAGGCCGCTTGGAGCTGTCGGGCTCAGCCAGCGGCGCGGCGGGCCGCTGCAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GGACGCGTGGGCCTCGGAGGGGCTCCTCGCGGTGCTGCGCGCCGGGCCGGGGCCGGAGGCGTTACTGCAGGTCT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGCGGCCGAATCGGCGCTGCGTGGGGAGCCATTGTGGGCCCAGAATGTGGTGCCCGAGGCCGAAGGGGAAGAC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GATCCGGCCGGTGAGGCCCAGGCTGGGAGGCTACCCCTGCTGCCCTGCGCCCGTGCCTACGTGAGCCCGCGGGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCCCTTCTACCGGCCTCTGGCTCCGGAGCTGCGGGCACGCCAGCTGGAGCTGGGCGCCGAGCACGCGTTGCTGC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGGACGCTGCTGGCCAGGTGTTCTCCTGGGGCGGGGGCAGGCATGGACAGCTGGGCCATGGGACCCTGGAGGCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAGCTGGAGCCACGGCTGTTGGAGGCGTTGCAGGGCCTAGTCATGGCTGAGGTGGCCGCGGGGGGCTGGCATTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGTGTGTGTGAGTGAGACTGGGGATATTTATATCTGGGGCTGGAATGAATCAGGGCAGCTGGCCCTGCCCACCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGAACCTGGCAGAGGATGGAGAGACTGTCGCAAGGGAAGCCACAGAACTGAATGAAGATGGTTCTCAGGTGAAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGAACGGGTGGGGCTGAGGATGGAGCCCCTGCCCCCTTCATAGCTGTCCAGCCCTTCCCGGCATTACTGGATCT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CCCCATGGGCTCAGATGCAGTCAAGGCCAGCTGTGGATCCCGGCACACAGCTGTGGTGACACGTGAGTGGGGCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGGAGGCACTCTGCTCCACTCGAGCTGGTGCCTACGGAAGGGGGTGTGGTCGACGGAAAAACTTCTGTCTTAAG 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GCTTCTGTGGCTCATACAGAGCAGCTACCTTGCTCAGTGGATAAGCCCCAACCCCCTTGTTGTTTCACAGTAGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TCCCCAGCCTGTCAGGCCCAGAAGTTTCTTCCTTCTGGTGGGAGGCTGATGCTTTCTGTCCTCCCTGCACGGCC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 ACAGACACATTCCCTGCCCGCCGCCGCCTCTGACAGCAGGGACTGTCCAGTCTGGCATGGAAGACTGCGGCGCT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CGGTAGCATGGCACACAGGAAGATCCGCCACTTTTTCCCTCGGGATCCTCTGCCATGCCACGTGTGATCAGCCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GTTGTTAAGAGAATATGTTGTTCCATGCCAGGCAGATCTCATGAGGATTGTAATATGCTAGCTGTGGGCTGTGC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CAAGCTGGGCTGGACAGATGCCTTGCCAAAGAACCGTAGTGACAACTATCGATTGTCCTTTTGCTTTCAGGAAC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGGGGAGCTCTACACCTGGGGCTGGGGTAAATATGGACAGCTGGGCCACGAGGACACCACCAGCTTGGATCGGC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTCGCCGTGTGGAATACTTTGTAGATAAGCAACTCCAAGTAAAGGCTGTCACCTGTGGGCCGTGGAACACCTAC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GTGTATGCTGTGGAGAAAGGGAAGAGCTGACATGTGTACGTATATGTATATGCAACACCTGTGAGACCCCCATT 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CAGGTCAAGGAAAACCATTGCCTGCACCCCAAGGGCCCCATATTTGCCCCTCCCCATCACAGTCCTGCCCTTCA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CCCTCAAGCACGGTCCTAAACTTGTCTGCACTTTAGAAACACCTGGAGAGCATTGAAAACTCTGCTGCCTAAGG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TCAGCATCAATCAAAACAATGAAATCAATGAAACAATGAAACCAGAGCTTCTAGGTGTGTGGCCTGGATAGTGG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TAGATTCAAAGCTCCACCCACCTCATCCCAGGTACATTTGATGTGCAGCTGAGATTGGGGCACATTCCAGGTCA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TCGTCTTCTGTCAGTCATTTCCCTGCTTTCGTTTGAATTTTACCATTCTTGTATGCAGCCTTATACGACATAGT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TGTGTTTGCTTTTGAGTGTTAGATAAATGGAATCCTGTGTATGTGCTTTTGTGTCGTTTTTGTCACTCAGCATT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 GTATAATCCATCCTTGTTGGGTCCTGGAGTTCATTTTTAATGCTATATGGTGTTCTGTTGTATGAATAATACCT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CAAGTGATACAGCCTTGTTGATGGTCATTTTTATTGTTTCTGATTTTGGTCATTCCACATAATTCTTTGTGCAG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TCTTCTGCACATGTGCACAAGTTCCTTTGCAGAACATTGAGTTGAATTGCTAAGTCAGGAGATACCTTTAATTT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TACTAGATAACTGTTGCCCCCAGCAGGGTGGGGTCTACTGTGGCTAAAATGTCAGGTAGATGCACACTGGTTTT 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AATTGGCATTTCCCTGGATACTGATGAGGTTGAGTAGCTTTTCATTTGTTTTGGATGGCTGGGCATGGTGGCTC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 ACACCTGTAGTCCCAGCACTTTGGGAGGCTAAGCAGGGAGATTGCTTGAGGCGAAGAGTTCATATGTTTATTGG 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 CCACTTGGAGTTTTTCTGTTGTCAAGTGCCTGTTCAAGTTTTCTGGCCTTTTAAAATGTTCTGTATTTTCCTTA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GTGATTTTTCTTTTGGATATTTCAGATACAAGTCTTTTGAGAGTTAGTATTCAGAGTATCTTCTGCTACAATGT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 AGTTTGTTTCAGTCTCTCTTGGTATTACCAATTTTAATACTTAGGTGATGCTTACTCCATGCCAGGTAAGGCTC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AAAGTGCTTTACAAGTATCAACTTATTTTGATAAAATAAGCTTATCAGTAGTTTTCTTTATAGTTAAATTCTAT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TTGTGCATGTGTGTGTCTGTGGTTTAGCAAATGTTTCCCACCCATGGGGTCTTTTTTATTGTGGTAAAATATAC 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TGAACATAAAATTTATGTTCAATAAAAAACAAAAATTGTTTTTAACCATTTTAAGTACATAGTTCAGTGACATT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 ATATGCATTCACTGTTGTGCAACCGTCACCCCTATGCATTTCCAGAACTTTTTCATCATTCTATGCTGAAACTC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TGTGCATTAAACACTTAACTCGTCAGTCTCCCCTTCCCCAGCCCCAGGCAACCACAGTCCTAACCTTCTGTTCC 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 TATGATACTGTAAGTGCCTCATGTAAGTGAAATCCCATAGTATTTGTCTTTTTATGACTGGCTTATCTCACTTA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 GCAGCATGTCCTCCAAGTTCATCCATGATGTAGCTTATGTATCTAGACTTCCTGCCTTTTAAAGGCTAAGATTC 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 TGTTGTATGTATACACTGCGTTTTATTCATCCGTGCATTGGTGGATATCTGAGTTGTTCACTACAGTCAATAAT 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GTTGCTGGGAACATGGGTGTACAACTCTCTTGAGTCTCTGCTTTCAGTTCTTTTGGATATATACCCAGAGTGGA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 ATTGCTGGATTGTGTGGTAATTCTAAATTTTTTTGAGGAACTGCCCTGTTTCCCACAGAGGCTGCATCATTTTA 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 CATCCCCACTGGAAGTGCACACAAATCCTAATTTCTCCACATCCGCGTCCACACTTGTTTTCTATTTCTGGTTA 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 ACAGCCATCCTAATGGGTGTGAAGTGGTATTTCATTGTGGGTTTTTTTTTTTTTTTTTGGACAGGGTCTCTCTG 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 TTGTCCAGGCTGGAGTACAGCCTCCACCTTCTGGGCTTAAGCCATCCTCCCGGGTAGCTGGGGCTACAGGCACG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 TGCCACCACATCTGGCTAGTTTTTTGTATTTTTAGTAGAGATGGGGTTGTTGCATATTGCCCAGGCTGGTCTCA 4070
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4071 AACTGCTGGGCTGAAGCGATCCACTTGCCTTAGCCTCCCAAAGTACTAGGATTATAGGCATGAGCCATCATGCC 4144
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4145 TGGCCAAGCCATTTTTTAAAATGGACAAAAGTCAACAAAGACGACAGAAGGATAGCAAGTGAGCATATGAGAAG 4218
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4219 ATGCTCTACATCATTAGTCATTAGGGAGTTGTAAATGAAAACCATAGTGAGACACCACTCCATACACAGAATAA 4292
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4293 CTAGAATTACATAAAGGCTGAACATACCAACTGTTGGTGAAGATGTGGAGAAACTGGAACCTTCATACATTACT 4366
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4367 GGTAGGAATGTAAAATGGTACAACTGCTTTGGAAAACAGTTTGGCATTTCTTCTTTTTTAAGATGGAGTCTTGC 4440
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4441 TCTGTTGCCCAGGCTAGAGTGCAGTGGTGCAATCTCAGCTCACTGCCACTTCCGCCTCCTGAGTTCAAGGAATT 4514
Query 1 -------------------------------------------------------------------------- 0
Sbjct 4515 CTCCTTCCTCAGCCTCCTGAATAGCTGAGATTACAGGTGTGTGCCACCACAGCCAGCTAATTTTTGTATTTTTA 4588
Query 1 ------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGC 68
||||||||||.||||||.||.|||||||||||.|||||||||||||| ||||||.||||||||.|||
Sbjct 4589 GTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCTC--GTGATCTGCCCACCTTAGC 4660
Query 69 CTCC---------------------------------------------------------------------- 72
||||
Sbjct 4661 CTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCATGCCCGGCCCAGTTTGGCATTTCTTAAAAAGTTAAGTG 4734
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4735 TACACATACCATAGATGTGATCCAGCCATTTCACTCCTAGGTATTTATCCAGAAAAAAAAATATATCCATACAA 4808
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4809 AGACTTGTACATGAATGTTTATAACAGCCTTGTTTTTAATAGCCAAAAACTGGAGAAAAGCCAAATGTGAAAAA 4882
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4883 TAAACCTAACAGGCGAATAAACTGGTATATCAACACCATGGAATACTAAGCAAAAAAAAAAAAAAAAAAAAAAA 4956
Query 73 ------------- 72
Sbjct 4957 AAAAAAAAAAAAA 4969
