Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- XR_001752138.2
- Aligned Length:
- 7163
- Identities:
- 64
- Gaps:
- 7091
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GATGCTCCCAGAGGCTGCTCTCAGTTCAGAAGCTTCCTGTATTACACAAAGCCTGCCCTGCAGGTCCCGAAAAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCAGAGGATGGGAAAACACATCATAGAGTCAGCTTGTGATATCACGCATCATCTTTAAGAAAGCATTTGTGGAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTTCACGTAAAGCCCCTGTGCCTCTAACGTGGGCCCATACCTGGGGAAAATATTTGGATAGATTTTATCTGGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AAAGGCCAAGGAAGCCAGCCAAGATGAGATCTGTTCCTCAGACTCACTCATTGCAGCTCCACAAGGGCTCACCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CATGGACATGCTGCAAGAACAGGTTCATGTAACAACAGTAACCCTATGAGGTAGATGCTCCCATTGCAAGCTGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AACTCTGCAGAGATCAAGTCAATGCCCAAGATCATTTGCGCTGGGGAAAGCTATTCCAGCTGTCCCGTGCAGAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACGTGCTTGGCAAGGAGCAGAAGTTGCAGGCCAACAACTGCATGTGGGGGCAAATCCACCAGCTTCAGTCAAGC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTCGGATGACTGAGCTCCCAGCTGACAACTTGATTACAGACTTGTGAGAGACCCTTAGCCAGACCCACTCCAGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCCAGGTCTCAGGAGCCCTCGGGGAAGGTTTGGTGGCTGCAGAAAGGACTTTCTCTGAGAATCCAGAAGTGACA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCAGGGAAGAACCTCAAAGGATCCATGGTCCCCCAACACAGAGCAAGTGACTGCAGCTCCTAGAATCTCTTCCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TCAGGGAGGCCCAGAGAAATTAAGTGTTAAGAGGCCTTACCCTCAGACAACATCTTCTCTCAGCCTCTGTGGCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACAGTATGTACAGTGTGCTGAGTGTGGAAGGACCTCTCTCCCCATTAAATCTGTAGTGCGATCACATGGAAGGC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATCTGAGGACCTAGAGCAAGGAAACATGGCTATCCTGCCCCACTGTGGTCCCGATCTGGGTACTGAATCAGCAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CTTCCAAGGATTTTTAAAATAGAAACCCCCAGTTCTCAGCCTACACCAATGAATCAGAATCTCTCAGGATGGGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTCAGGGAAGCTGTGTTTTTAAAAACTCCAAGTACCTTACTTACCTTCTCACCATCATGAAAATAGAAATGAAC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 AAAATTAACAAGGCAACAATTTCCAGGCACTGGACCAGAGGCACAGTGCAGAACTGTGATCTCTGAGAGGAGGG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CAACACTCAAGGGAGGGAGACCTGTGTTTGCCCAGGTTCTGCCCAGGTGAAGCACAGGGAGGGGAAACCCAGGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGACCACAGTGGTCTGATGGAGCTGAGCAGAATTCGGAGCTTGGGCTGCTGAAGTGGCTGGCATATGTGGGGGC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGAAAACAGGAAAGGAAAGCTGCAGAGGGAGAGAACAAAGACCCCAGAAATGTGTATGCGCATGTCCTGTGGGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TGTTGGTTGAAGCCCGGGCTTTGAAGAACAGAGCAAGACTTGGTGGAGCCTAGCAGAGAGCAGCTGCTAAGGGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CTGGGAACAGAATGGAAACATAGGGAGACTCTCTGCAGGGCTGGGAGTTCCAGCTCAGCTAGAATGGAGAAACT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CTGGTGTGCATCTCAGTGGAGACTGCATAAAGGCCATGTATTAGGAATAAAGACTACGCTTCTAGGAGAAGGAC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TACACCCTAGCACAGAGTTTCTTGGTATCAGCAATACTAGCATTTTAAACAGGTCATTTTTATTTTCCCCTCCG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GAGACAGAGTTTCACTCTTGTTGCCAAGGCTGGAGTGCAATGGCATGACCTCAGCTCACTGCAACCTCTGCCTC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CCAGGTTCAAGGGATTCTCCTGCCTCAGCTTCCCAAGTAGCTGGGATTACAGGTGTGCACCACCACGCCTGGTT 1850
Query 1 ----------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTG 52
|.||||||||.|||||||||.||.|||||.||.|||||||||||||||||||
Sbjct 1851 AATTTTTGTATTATTAGTAGAGACGGGGTTTCACCATGTCGGCCAAGCTGGCCTTGAACTCCTGACCTCAGGTG 1924
Query 53 ATCCGCCCACCTCAGCCTCC------------------------------------------------------ 72
||||.||||||||.||||||
Sbjct 1925 ATCCACCCACCTCGGCCTCCCAAAGCACCGGGATTACAGGCGTGAGCCACCATGCTCAGCCCAGGTCATCTTTT 1998
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1999 TTGTGGGGATTGTTTTGTGTATTATAGGATGTTTAGCAGCAACCTTGCCCTCTACCCACAAAATGCCAATAGCA 2072
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2073 CCCCACCCCCATTTATGAGAAACCAAAATGTTTCCAGATATTGTAAAATGTCCCTGGAATGGGGAGCAAAATTG 2146
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2147 TTCTCAGTTGAGAATAACTGTCCTAGTATAACGGCCACATCTTATGACTAATGATGAAATGAAAATAGACCAGT 2220
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2221 CCTAACAACAACAACAAAACAACAAAAGAAAACAAAGTGTAATAGGATCATGAGAATTCATCAGTATTTAAATG 2294
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2295 TCTAAATTAATAGCCAAACTCATAACATTTAAAGGAAAACAACATAATCCAATCTCCCTACAAGGTATCATCCA 2368
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2369 CAATATCCCACCTACAGTGAGACAAGTGAAACAAACAAAAAAATATGATCTATAATCAAGCAATTGGTAGTCAA 2442
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2443 TAGAAACAGACACTTAGATGGCACAGGTATTGTAATTAACAGAAAGACTACAATAGCTATTATAAATGAGGGGT 2516
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2517 CAGGAAATGTAAAGATGGATCAATAGAAATTATTCAATCTGAAGAACAGAGAGTAAAAAGAGTTTTTTTAGAAA 2590
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2591 AAAATGAATAACCATTGCTATTGACTTTAATGTGTCAAGATTTTCAATGGAGAAAGAAAGTCTTATCAGCAAAT 2664
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2665 ATTAATAGTATAGAAGAAATTGGATAGTGACATGGGAAAAAAGAACCCCACACTACATACAAAAATCAGCCTGA 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 GATGAATCAAAGATGATTTAGATTTTAAAAGTGAAGTCTAAAACAGTACAAAAACTGAAAGAAAGCATAAGAGG 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 ATGTGATTTTGGTAAGCCAAAGTTTCTTAAGTGGGACACAAACAGCAACCAACAATAACTATAAAAGAAAAATA 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 TGATAAATTGCATGCCATCAAATTAAAACCTTTTGTTTCTCAAATGCACCATGAAGAAAATGAGTAAGCAAGCC 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 ACAGATTGGGAGAAAATATTCCCAAAACATATATTTCACAAAGGACTGGTGTCCAAAATATAAAAAGAATGCAT 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 ACAACTTTTTAGAGACAGGGTCTCATTCTGTTGTCCAAGCTGGACTGCAGTGGTGTGATCATAGCTCACTGCAG 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 CCTGAACTCCTAGGCCCATGTGATCCTCCCACCTCGACCTCCCAAGTAGCTGGGACTGCAAGCACATGCCACAA 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 CACCTGGCTCAATTTTTTTTTTCTTTTTTTATAGAGACAAGAGTCTCCCTATGTTGCCCAACCTGCTGAGCTGG 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 TCTGAAACTCCTGGGCTCAAATGATCTCTTGGCTTGGCCTCCCAAAGTGCTGGGATTATAGGCCTGAGCCACCG 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 TGCCCAGCCTAAATCCCCAGTTTTTGAAATAAGCAAAATAAATTTGAACAGACATTTCGCAAAAGGAGATCCAT 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 CATTGGTCAATTACCACATGAAGAGTGCTCAACATTGTTGGTCTTCAGGAAAATGAAAATTAAAACCACGATCT 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 GTACAAATTCATCCAACAAAATACCTAAAATTCAAAAGACAGAAAACATTCAGTGTTGGAAAGAATATGGGGCG 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 ATCAGGACTCTTGTGAACTGTTGGTAGAAATATAAAAAAGTACAACCAGTTTGAAAAAAGTTCCAACAGTTTCC 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 TTGTAAAATTAAATAAACACCTGCTTTATGATCAAACAATTCTACTTCTAGGTATTTACCCAAGAAAAAGGGAA 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 ATACACATTCACAGTAAAAGACTTGTTCAAGAAGATTCATAGTAGCTTTATTTACAATATCTAAAAGCAGAAAA 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 CAGCCCACGTGTCATTAATAGTAGACTGGCTAACTAAACTGTGGCAACTTCACATTGTGGAATCCTACTCAGAA 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 GCAAAAACGAACAAACTCCTGTTACATGCAGCAACATGACTCTCAAAAAATCATTAAGCAAAGAAAAAAACTTA 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 CAAAAAAGAGTATATACTGCATTATTTTATTTATATAACTTTTTTTTTTGGACAGATTTTCACTCTTGTCACCC 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 AGGCTGGAGTACAATGGCATGATTTCGGCTCACTGCAACTTCTGCCTCCCGAGTTCAAGTGATTTTCCTGCCTC 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 AGCCTCCCAAGTAGCTGGAATTACAGGCATGCCCACCACACCTGGCTAATATTTTTTATGTTTTAATTTTTATT 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 ATGTTTTTATTTTTAGTAGAGACAGGGTTTTACCATGTCGTTCAGGCTGGTCTTGAACTCCTGACCTCAGATAA 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 TCCACCTGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCCACCATGCTAAGCCTATATAAAGTTTTA 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 TGAGAAACTTTAATAATAACTTCAATTTTCCATAGGTTAATGTAAAATTAATTAAACTGGTGAAAAATAATTAC 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 AACAGTGGTTGTCTCCGGGGAGGAAATTGACTAGGAAAGAGCATGAGAGAACTTTCCGGAGTGATGATAGTGTT 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 CTACATCTTGATAGAAGTTTGTGTTATGCAAGTGTATGCATTTGTCAAAATTCATCAGGTGGTACACTTAAAAT 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 TTTAAGTGTGTCATTGATGAGTTTTGACAAACTATAGGTATAAGGTTTATACGTATGTACTTGTATCTAGATAT 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 AAATCTTACCTTTGAAAAGAAACCACAAACAAATATTAAACTCTTGTAATAGTGTCTATGCTATTACATGGATT 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 TGAGGACAAACTGTATTGATGCCCACAACTTACTTTGAAAGCCATCCTAAAATTAGATGGATTGATGGATGGCT 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 AGAAAATGAGCAGATGGTTAGATATGTGATAAAACAAAATGTTAATTATGGAATCTTAGTGGTGAGAATATGGG 4810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4811 TCTATAATTTCTTCAATTTCTTATATGTTTGAAAAATTTCATAATAAAATATTAGAAAGTAGATGAACAGAAAG 4884
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4885 TCAGTAACTAGTGGGTCAAAATCAAGTTGTCAAACATATGCACAATTGAATTTCCTGAAGAGGAAAAAGAAAGA 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 ATGGAGAAAAAAAATTCGGGAATAAATAATTTCCAAAATATCTCCCAAATTGGTGGAAAACGTCAATGTACAGA 5032
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5033 TCCAAGAATTCTAAAGAACTTTAAGTTGGATAACTACAAAGAAGACAGTATCTAGGTGCATCACGGTCAAACTG 5106
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5107 CTAAGAAACAAAAATAAAGAGAAAATCTTTAAAGCAGCCAGAGGAAAAAAGTCACATCATGTATGAAGGAATGA 5180
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5181 TTAATTAAATAATAGCCGATTTCACACCAGGAAAAAAAATTGAGCCCAGAAGACAGAAGGATGGTATCTTTAAA 5254
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5255 GTGCTTGGGGAACAACACCAGTGCAACATTCTATGTCCTACGCTCCCCCAAAGCAAAGCACAAACAAAACGAGA 5328
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5329 TATTCTTCAAAAACAAGAGGGATAGAAAGACGTTCAGATAAGCAAAAGCTGAAGCTGTGTGCCAACAGGGAATA 5402
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5403 TGTGTTATAGGAAGTGCCAAATAAAGTTCTCAAACTGAAGGGAACTAGCAACAAATAGGAAATCCAATCTATTG 5476
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5477 TAAGAAAAGAAATGGAGAGCTTTACTAATAAATAGTAAATATATGTATAAAAATAAAAGACTCAGTTTTATTTC 5550
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5551 TTAAAAATTTTAAAAGACACCTGACCATTTAAAGCAAAAAATAATAACATTGCATTGTAGAATTTGTAGCTTAT 5624
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5625 GTATTAGTAAAGCATGTGACAGTAATAGCACAAAGATTGGGGGAGTGGTAAAAAGAATTATACTGTTTTGGTTT 5698
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5699 TACATTTTATGAAAAGTGGCACCATATTACTTCTAAATTGACTATGGAAAATTAAAGATACATCTTTTTCTATC 5772
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5773 TGGGGCAACTACAAATAAGAATATACAAAAAGTATAGCCAAAAGCCAACTGAAAAAATAAACTACAACACTACA 5846
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5847 AAATATTTAATTAGTGTGAAACAAGGCAAGAAAGAAGAAAAAAAAGCCCATAAAATAGTAAGATAACAGACTTA 5920
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5921 GTTATGTCAATATTTACATTAAATGTAAATGGACTAAACGTTCCTGTTAAAAGACAGAAACTGTCTGAATAGAT 5994
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5995 AAAAATGCTAGACACAACTATATGCTGTCTAAGACATGCTCTTTAAATATAAGATGCAGGTCAGTTAGACACAC 6068
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6069 GGAACATGTGACAGGAGAGAAGTGAAGATAACAATGTCAATAGACACAAGGTCAGTATACAAAAATAAACTCTA 6142
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6143 TCGTAGCAGCGCACAACAGGAAAACATAGTTTAAAAACAATTCCACTTGCAAAATGTAAAACCATACATGCTTA 6216
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6217 GACATAAATATAGCAAAATATGTTCAAGGCCTTTGCATTGAAAACCAGCAAACATTGCTGGGATAAATTTAAAA 6290
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6291 GAAGATTTAAATAAATGGAGAACTATACAATACTATGGATTAGAATACTCAATATTTTTAACATGTAATTCTTG 6364
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6365 TCAAATTGGTGTATATATTAAATGCAAACCCCATTGAAACACCAATGGGCATTTTTAAAGAAATGAATAACTTA 6438
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6439 ATTGTAAAATGTACAGCAATGCAAAGGACCTAGAATGTTACAGCAATTTTAAAAAAGAACAAAGTTGGAGGAGT 6512
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6513 CACACTACCTGACTTAAAGATTTGCTAATAAGCAACAAAAATCAAGACAGTGTAATATTGTCATAAAGATAGAT 6586
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6587 ATATGGAAAGATGAAATAAAATTTAAAGCCTAACATAGATTTACACATCTACAGTTAGTTTATTTTCAATAATG 6660
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6661 TATCAAGGCAGTTCAAAGGGGGAACAGAAAGTCTTCAACAAATGGTACTAGAACAACTAAATAACTGTATGGGA 6734
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6735 AAAATTCTAACCTCTACCCCTATATAATACCATGCAAAAGTTCAATTTGTACTAGATCATAGAACTAAATGTAA 6808
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6809 ATGCTTAGGCTCTAAAGCTTCTAGAAGAAAACATCTTTGAAAATCATCATGGCTTTGAGGTAGGCAAAGATTTT 6882
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6883 TTAGAGTGGGCCTTAAAAGCACAAATTATTTAAAAAAATGGTAAATTAAACTTCTAAATTTAAAACACCTCCTT 6956
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6957 AACAAAAGACATCATTAAGAAAAAGAAAAGGGCCAGGCATGATGGCTCATGCCTGTAGCCCCAGTACTTTGGGA 7030
Query 73 -------------------------------------------------------------------------- 72
Sbjct 7031 AGTGGAGGTGGATGGATCACTTGAACTCAGGTGTTTGAGACAAGCCTGGCAACAAGGTGAAACCCCATTTCTAC 7104
Query 73 ----------------------------------------------------------- 72
Sbjct 7105 AAAAAATACAAAAAAAAAAAAAATCTGGGTGTGGTGGTGTGCACCCGTGGTTCCAGCTA 7163
