Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10261
Subject:
XR_001753080.2
Aligned Length:
3222
Identities:
66
Gaps:
3151

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TGACCCGAGATTGCGCTACTGCACTCCAGCCTGGGCGACAGAGCGAGGTTCCGTCTCGAAAAAAAAAACAACGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AAAGGGGACTCACTTCGGAGAAGCTGCCCTCTCTGCAAACTTATTTGAAGATGTGGTCTTGCTATGTTGCCCGG  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCTGAGTGCAGTGACTATTCACAGGCCGGATCTAGTGCACTGCAGTCTTGAACTCCTGGCTTACAGTCCTGCTG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GTTCTGAGAGGCAGGGGAAGAAACGGCCACCATGCTCTGCAGCTAGGTCTCAGCATGAGGACCAAGAACCCTGG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TGTTCCTCCACTCATCGGAGCCGTATCATTTTGGTGCATTGGCCAGGAAAGGAAATTCAATCATGAGACTGAAA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATGGCCCAAGACTCTGGATATGGTGGCGACTCAACTGAAATGGTAAAATAAATGACATTAACATTTAAAAAGGA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  GAACTCAGATGAAAGCATACACAGATGTGCATGCATACACATAACCAAACACACACACACACACACACACACAC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACACACACACACACCCCAAACCAAACCAAAAAGGTTGACCCTCAATCTAACCTGGCTGTAATAAGGCAGCCAAA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TATGTATTTGTTGGTGCCTATTATTACGTTTCTCGTATAATTACTTAACACAAAATTTAAGTTACAACCTCTTT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CTCCTTTGAAACCAGGTGGGAAACATATAACTTGCAAATATCAAGAATTACATAATGTAATTTAATCAAATATG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GAATTTATAATATAGCAAAAATGGTACTAAATACTTCAGAAACTTTCTAAGAGGCAGATCATAGTATAATACCT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TTACAAATATATCCATTCAATTGAGTAATATGCAGTAATTGAAAATGACAGCTACATCATCAGTAAGAGACTAG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  TTATTAATAGAATAAGGGATAACAGAATATTGATAACTGATAGGTAGGTCTAGTTTAAGGACTAGTGGCAGGAC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  ACATTAAGTGAAAAAAAAAGCAGGTGTATAAAAAAATGTAGAGCAAGATCCTAGCTGTGTAAAGATATGCTATT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  TGTGTTACAGACAGACACAGACACACACACACACACACACACACACAAAATCTAAGGGGAGAAGGTCCTGGTCA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TGACTGAGGGGAGAGGGACACTTAATATTTGCTTCCTTGTACTCCTTGAATTTACAAATTACTTTTTTTACTTT  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TATTCAAATACAAAATCACAGTTTACCTAAGAAAATGTTTAGGAGTAATGTTAAATGAAAAAAGAGTATCATAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CAAGCATGAAAACACATCAGAAGTGGAAAAAGATTACCAAAATGCTAATAATGATATTATAAGTTTTCTGGTTT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CTAATTTTCAGTAAATTTGCTATATTACTTTTGTTGCTATTTAGTACTAGTAAGTAGTTATATTCCACTCCAGT  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AGGTGTAGCAAAATAAAAAGTAATAAAAAAGAAAAATAGAAAATAGTTATATTACTTTTATGAAAGAAAAAAAT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  TTATAAACCAACTTTCTCAAGCTAGGATTTGTTATTCCCCTCCCCAGAAGAAAATGAGAATGTGGATGGACTAT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  ACAAGTAGGTGTGTATATACACAAAAAAGAGATGAGATGATACCAGAAGTTGAGTTCAACTTCTATGCAATCAG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  TATCAGTCTATGACAGATTGTACATACAACTGAAAAGTACTAAAGTTATAATTAACAAACTTAAAGTGACAAGG  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CTGAATAGTGATCATGAATAAATTGCTACTATAAAAGCACTTTTTTTTTTTTTGAGATGGAGTTTCGCTTTTGT  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TGCCCAGGCTGGAGTGCAATGGCGCGATCTCGGCTCACCACAACGTCTGCCTCCCAAGTTCAAGCGATTCTCTT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GCCTCAGCCTCCCGAGTAGCTGAGATTACAGGCATGTGCCACCACGCCTGGCTAATTTTGTATTTTTAGTAGAG  1924

Query    1  ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC--  72
            |..||||||||||||||.||||||||||||||.||||||||||||||||||||| |||||.|||||||||||  
Sbjct 1925  ACAGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCAGGTGAT-CGCCCGCCTCAGCCTCCCA  1997

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1998  AAGTGCTGAGATTACAGGCATGAGCTACTGCACCCGACCGATAAACGCACATTTTAAACAAATTAGTTTACTAA  2071

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2072  AACTTCTGAAACAGATCATTAAGCAGGGTTTAAATATGTGTTTATCACTAAAACCAGAAAGGATTGGTTAGAAG  2145

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2146  TGTTATCTGTTGGTTAATAAGGACAAACAGTGGTATAATATTTCTAAACAGAGGAGATTAATGTTGACTCAGGT  2219

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2220  AATCAAGGAAAGCTTCAGTGGAGGAAGTGTGATTTGAATTGAACCTCAAAGAATGGCAAAGTACTGTATAAAGA  2293

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2294  ACAATAAACCATAAAATATAATAAAGAACTATAAAAGATCTGAGACAGTAATGGCCATCAAACCAATACTACTA  2367

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2368  TTCTGTTTGTTAATTACCAAAGTTTCCATTTCCTGAAGTGTGACTAACCTACTTCCTGAAGTACCCTAACCAAA  2441

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2442  GGTAGATTCAACTTACTATATCTCTGAGCTGGCAAGAAAGCAAAATCCTCACAGGCCAAAAATTAAGTACAAGC  2515

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2516  AGGAAGGCAAGAAGTCAGTAATAGTTGAAGTTGACTGCCTGAGACAGCTCCTCAATCATGTTTGATGACCTTAA  2589

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2590  ACTTCCATTTTGAGGGTACAAGGGACTCTGGGGCTAGAAGACAAAGGCTGGGGCCCAGCCAAGGAGAGGAGGCT  2663

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2664  GACAGGAGTCCCTTGAACAGAGGACTACACACTATGTAAGAACAGGCTAGGCTAGAAAAACAAAACCCCAAAAC  2737

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2738  CTCACCTCTAAAAGATGAAAAAAGGAACTGTCTTTCTCAGTCTTGGTGCTCTTTGGAGGGAGAAAAATCCCCCC  2811

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2812  TCTCCAAATGCATAACTATACATTGCCCTTTCTTGAGTATTCAGAGCCCAAATTTGTGCTCTCTGATGATCTAA  2885

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2886  AAAACTCCTCATGTTGAGAAGTTAAAGTGACTTCAGACTGCAAGTATCTCCCAGAAGACTATCCTGGCTCTAAT  2959

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2960  CCAGGCTTATTTCCATTACACTATGTATGTTTTCTCAGTGCCTAGAGTGTGCAGAATTTGTTCCCCAGAGAATT  3033

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3034  TAGTGTGCTGTAGGTGTATTTTGTATTTTGCCAACTAAGGCATATAAGGCCATAAATTATAGAGAAGAATTAGC  3107

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3108  TTTTAAAGTTTATGACCCTTAAAATACCTAATGACCAAAGTTAGTTTTTTAAAAAAGTGAAACAATTCACTCTA  3181

Query   73  ----------------------------------------  72
                                                    
Sbjct 3182  AGGTAGCATATCTTTTTTTTTTTCTTTGAGACAGTCTTAC  3221

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