Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- XR_001753080.2
- Aligned Length:
- 3222
- Identities:
- 66
- Gaps:
- 3151
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGACCCGAGATTGCGCTACTGCACTCCAGCCTGGGCGACAGAGCGAGGTTCCGTCTCGAAAAAAAAAACAACGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAAGGGGACTCACTTCGGAGAAGCTGCCCTCTCTGCAAACTTATTTGAAGATGTGGTCTTGCTATGTTGCCCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCTGAGTGCAGTGACTATTCACAGGCCGGATCTAGTGCACTGCAGTCTTGAACTCCTGGCTTACAGTCCTGCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTTCTGAGAGGCAGGGGAAGAAACGGCCACCATGCTCTGCAGCTAGGTCTCAGCATGAGGACCAAGAACCCTGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGTTCCTCCACTCATCGGAGCCGTATCATTTTGGTGCATTGGCCAGGAAAGGAAATTCAATCATGAGACTGAAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGGCCCAAGACTCTGGATATGGTGGCGACTCAACTGAAATGGTAAAATAAATGACATTAACATTTAAAAAGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAACTCAGATGAAAGCATACACAGATGTGCATGCATACACATAACCAAACACACACACACACACACACACACAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACACACACACACACCCCAAACCAAACCAAAAAGGTTGACCCTCAATCTAACCTGGCTGTAATAAGGCAGCCAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TATGTATTTGTTGGTGCCTATTATTACGTTTCTCGTATAATTACTTAACACAAAATTTAAGTTACAACCTCTTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTCCTTTGAAACCAGGTGGGAAACATATAACTTGCAAATATCAAGAATTACATAATGTAATTTAATCAAATATG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GAATTTATAATATAGCAAAAATGGTACTAAATACTTCAGAAACTTTCTAAGAGGCAGATCATAGTATAATACCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTACAAATATATCCATTCAATTGAGTAATATGCAGTAATTGAAAATGACAGCTACATCATCAGTAAGAGACTAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTATTAATAGAATAAGGGATAACAGAATATTGATAACTGATAGGTAGGTCTAGTTTAAGGACTAGTGGCAGGAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACATTAAGTGAAAAAAAAAGCAGGTGTATAAAAAAATGTAGAGCAAGATCCTAGCTGTGTAAAGATATGCTATT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGTGTTACAGACAGACACAGACACACACACACACACACACACACACAAAATCTAAGGGGAGAAGGTCCTGGTCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGACTGAGGGGAGAGGGACACTTAATATTTGCTTCCTTGTACTCCTTGAATTTACAAATTACTTTTTTTACTTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TATTCAAATACAAAATCACAGTTTACCTAAGAAAATGTTTAGGAGTAATGTTAAATGAAAAAAGAGTATCATAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAAGCATGAAAACACATCAGAAGTGGAAAAAGATTACCAAAATGCTAATAATGATATTATAAGTTTTCTGGTTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTAATTTTCAGTAAATTTGCTATATTACTTTTGTTGCTATTTAGTACTAGTAAGTAGTTATATTCCACTCCAGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGGTGTAGCAAAATAAAAAGTAATAAAAAAGAAAAATAGAAAATAGTTATATTACTTTTATGAAAGAAAAAAAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTATAAACCAACTTTCTCAAGCTAGGATTTGTTATTCCCCTCCCCAGAAGAAAATGAGAATGTGGATGGACTAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ACAAGTAGGTGTGTATATACACAAAAAAGAGATGAGATGATACCAGAAGTTGAGTTCAACTTCTATGCAATCAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TATCAGTCTATGACAGATTGTACATACAACTGAAAAGTACTAAAGTTATAATTAACAAACTTAAAGTGACAAGG 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CTGAATAGTGATCATGAATAAATTGCTACTATAAAAGCACTTTTTTTTTTTTTGAGATGGAGTTTCGCTTTTGT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TGCCCAGGCTGGAGTGCAATGGCGCGATCTCGGCTCACCACAACGTCTGCCTCCCAAGTTCAAGCGATTCTCTT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GCCTCAGCCTCCCGAGTAGCTGAGATTACAGGCATGTGCCACCACGCCTGGCTAATTTTGTATTTTTAGTAGAG 1924
Query 1 ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC-- 72
|..||||||||||||||.||||||||||||||.||||||||||||||||||||| |||||.|||||||||||
Sbjct 1925 ACAGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCAGGTGAT-CGCCCGCCTCAGCCTCCCA 1997
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1998 AAGTGCTGAGATTACAGGCATGAGCTACTGCACCCGACCGATAAACGCACATTTTAAACAAATTAGTTTACTAA 2071
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2072 AACTTCTGAAACAGATCATTAAGCAGGGTTTAAATATGTGTTTATCACTAAAACCAGAAAGGATTGGTTAGAAG 2145
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2146 TGTTATCTGTTGGTTAATAAGGACAAACAGTGGTATAATATTTCTAAACAGAGGAGATTAATGTTGACTCAGGT 2219
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2220 AATCAAGGAAAGCTTCAGTGGAGGAAGTGTGATTTGAATTGAACCTCAAAGAATGGCAAAGTACTGTATAAAGA 2293
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2294 ACAATAAACCATAAAATATAATAAAGAACTATAAAAGATCTGAGACAGTAATGGCCATCAAACCAATACTACTA 2367
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2368 TTCTGTTTGTTAATTACCAAAGTTTCCATTTCCTGAAGTGTGACTAACCTACTTCCTGAAGTACCCTAACCAAA 2441
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2442 GGTAGATTCAACTTACTATATCTCTGAGCTGGCAAGAAAGCAAAATCCTCACAGGCCAAAAATTAAGTACAAGC 2515
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2516 AGGAAGGCAAGAAGTCAGTAATAGTTGAAGTTGACTGCCTGAGACAGCTCCTCAATCATGTTTGATGACCTTAA 2589
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2590 ACTTCCATTTTGAGGGTACAAGGGACTCTGGGGCTAGAAGACAAAGGCTGGGGCCCAGCCAAGGAGAGGAGGCT 2663
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2664 GACAGGAGTCCCTTGAACAGAGGACTACACACTATGTAAGAACAGGCTAGGCTAGAAAAACAAAACCCCAAAAC 2737
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2738 CTCACCTCTAAAAGATGAAAAAAGGAACTGTCTTTCTCAGTCTTGGTGCTCTTTGGAGGGAGAAAAATCCCCCC 2811
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2812 TCTCCAAATGCATAACTATACATTGCCCTTTCTTGAGTATTCAGAGCCCAAATTTGTGCTCTCTGATGATCTAA 2885
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2886 AAAACTCCTCATGTTGAGAAGTTAAAGTGACTTCAGACTGCAAGTATCTCCCAGAAGACTATCCTGGCTCTAAT 2959
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2960 CCAGGCTTATTTCCATTACACTATGTATGTTTTCTCAGTGCCTAGAGTGTGCAGAATTTGTTCCCCAGAGAATT 3033
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3034 TAGTGTGCTGTAGGTGTATTTTGTATTTTGCCAACTAAGGCATATAAGGCCATAAATTATAGAGAAGAATTAGC 3107
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3108 TTTTAAAGTTTATGACCCTTAAAATACCTAATGACCAAAGTTAGTTTTTTAAAAAAGTGAAACAATTCACTCTA 3181
Query 73 ---------------------------------------- 72
Sbjct 3182 AGGTAGCATATCTTTTTTTTTTTCTTTGAGACAGTCTTAC 3221
