Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10261
Subject:
XR_001753474.2
Aligned Length:
3015
Identities:
64
Gaps:
2943

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  TGCCGGCAACTTGATCTTGGACTTCCCAGCCTCCAGGATTGAAGAAAAATATGTTGCAAACATGGAGGAAAGAT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GATGGCCTCCTTCAACAGAACTATGAGTTGTCCAAGATTTCACAAAGTTCTTCAAGCATGGCATTTGATGATGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  GCCCTAAGATGACTTGAGCCTCACGTCAACTCTCTTTGCTACACGCCCCTCTTTGGAGACCACCACTTCATGCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  ATGGGGAGTGACATTAGGGCTGAACTTTAAGAAAGAGAACTCTGACAGTAATGAGAAGACAGAAAAAGAGAATG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACCAGATATCCAAAATGGGATCGTAGCATCGAACATGAGAAGGCCATGCATAAGATGGGGTAGGTCCAATCAAC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  AAAATTTGAAAAAAGGTCAGCTTTGGAGTGGTCTGAAAAGGGAGACAAAGGAGGAGACAGAATTCTGGATGATT  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TCACGGTAACAATCCTGAGTGACTTGGAGGATATAATAGTATTAACTAAAAAGGAAAATGCACAAGACAGCAAT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TTGAGGGAAGGACATTTAGATGAAGAGATCCTTGAGAAATACATGCATTTAAAAGACAAGTGGGAGAGAAACTA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  ATGAAGGAGCTGAAAATGGCCAATGACACTGGAAAAGAACGACGACAGTAAAGTGTCCTAGTAGCCAAGGGAAG  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  AGAGAAAGCACTTTTTAAAGGATGAGATGATCACTTGTGTCAACTTCTGTCAATAATTAAAGGAGACAAGGGAC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  AAGATGACATCCGTGGATATGGCAAATAGCCAATAATAATGAAAGCTAGCATCACATCTGCTGCATGCTTGTCA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CATGCCAGGCACACCACTTCAAGAGTTGTACAAGTAAGAACCCATTTCATCCCCAAGAACCCTAGGACGTAAGT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GTGACTAGCATCCCCATTTTGGTGCTCAGCCTCTCGAGTAGCTGGGCTTACAGGCATGCGCCACCAGGCCCAGC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TAATTTTTGTATTTTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGATCTCGAACTCCTGACCTCAGGT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GATCCACCTGCCTTGGCCTCCCTTGTACAAGTAAGAACCCACTTCATCCCCAAGATGAACGTTAAGTGTGACTA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  GCATCCCCATTTTGGTTCATCCCCAATTTCATTTCATCCCCAAGAACCATAGGACATAAGTGTGACTAGCATCC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CCATTTTGGTAACCAACAAGAAAATTAAATCCATAATAAGGAAGAGGCAGAACCCAAAGTGGATGGGGCTGAGG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ACAAATGAAAGGTGAGAAAGAATAATCTGCCTATAAATGAACAGAGGTATAAGAAAACAGAACAGCAGCTGCAG  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  GTAAAAATGGTTTTGTTTGTTTGTTTGTTTTGTGTTTTTTTGGTTGTTGTTGTTTTTTTTTTTTTTTTTTTTGA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GATGGAGTTTCACTCTTGTTGCTCAGGCTAGAGAGCAATGGCTTGATCTTGGCTCACTGCAACCTCCGCCTGCC  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  GGGTTCAAGCGATTCTTCTCCCTTAGCCTCCCAAGTAGCTGGGATTATAGGCATGCACCACCACGCCCGGCTAA  1554

Query    1  --------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGAT  54
                                ||||.||||||||||||.|||||||||.||||.|||||.|||||||||||||||
Sbjct 1555  TTTTTGTATTTTCAGTAGAGATGGAGTTTCTCCATGTTGGTCAGGCTAGTCTTGAACTGCTGACCTCAGGTGAT  1628

Query   55  CCGCCCACCTCAGCCTCC--------------------------------------------------------  72
            .|.|||.|||||||||||                                                        
Sbjct 1629  ACACCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGTGTGAGCCACCGCACCCAGCTTGATTTTTAAGACAG  1702

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1703  AAACTATTTGAGCATTTAAGCGTTTACCAACTGAAGAGACAGAATCTAGGTCTGCCCCATAGAAAAAAAAATCT  1776

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1777  CTGGTGCTACTGGGAAAAGTCACGAAGACAGAGGTATGATGTCAAAGAGTCCAGAAAGTAGACAGAGAAAGAAA  1850

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1851  TACAGTAGAGAATAGCATAGTGTCACCAAACAATAGTGTCACAGCACCATGGACTGACTGACTCTGACAGTGAG  1924

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1925  AAAACTAAAAAAGAGGGACTGAGAAAGAGTAAGATCTGAGAGGAATCAGACAGAAATAGTAGCTGTGTAGCAGT  1998

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1999  CTCGGAGTTCCTTCCATCCCAAAACAAGGGTGCGATGAGCGACAGCAGTTCAGTACAGGCTGCAAAAGGCTGAA  2072

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2073  TGAGGTGTTCGCATGACTTGCTGCACGGGAGACTAGAAAACCTGGCAAAAGGTAGAGTCCAGGGCTGAAGACAG  2146

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2147  CAGATGTCCAGGGCCTACTCAACCTATAGGAAAAGCACTGGGTGATCTTCCCCTGCTTTTTGGTAGCGCCCTGC  2220

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2221  TTCCTCCCGAGTTCCACCGGAGGTCAGAGAACACAGTTTCAGGTTTCACACTATATACTTATTTCAGAAGCATG  2294

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2295  CAGAGTTATGCAGAAAAAAGGACACTCAAAGAGCAGTAGAACAGACAAGTTACTGCAACCACTTTAGCTGCACA  2368

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2369  GGTTGGCTACTTCTCTACACAGCTTGGGAGCTCATGCATAGCCCGGAGGGAGAAGTGATTGCTAGAGAACAAAA  2442

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2443  AAATTAGTAACTGAGTCATACGGGGAAAATTTCTGGATAAAAATTTTAATTGGCTAGGTGGATCCTTAGACTGG  2516

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2517  TAGACTTTGTGGATTTAGCTGCAAAGTGTATTTAAAGGAGTGTTAAAAAGTAACAACTGTTGTTTTAGATATTT  2590

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2591  TACAATTTATATTTCTAGGATAAAAACACTAAGAACTCTTTTCCATAAACACCTCTATTGCAACCATTATGGTA  2664

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2665  AAATTAAAAAATAATCAATATTTTAAAATGAATTATATACATGCAATAGAGGTATTTCCTTTGAGCAATTTATA  2738

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2739  TCCTACTTAGATTAATCATAAAAACCAAGGTCGCAAAATTAAAGAATTGTTCTAATTTTTAAAATTTAAATTCA  2812

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2813  AAGCATAAATCTACATGAAAATCACGTAAAATCAAGAGAACAGGTAGGGCATGGTGGCTCACACTTGTAATCCC  2886

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2887  AGTACTTTGGGAGGCCAAGGCAGGTGGATCATTTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAA  2960

Query   73  -------------------------------------------------------  72
                                                                   
Sbjct 2961  ACCTCGTCTCTACTAAAAATGCAAAAATTAGCTGGGCATGGTGGCACACATCTGT  3015

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