Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- XR_001753508.2
- Aligned Length:
- 5122
- Identities:
- 65
- Gaps:
- 5050
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTGCGGGAGGTCGGACATGTCCTGATTGCGTGTTCATCACGATGGCAAACCGAACATGAGGAGAACGCCACTGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCTGGGTGCGCCGGCTTTCCCAGCCCTCGTGCATAACGGGGAGGGAGATGCAGAAGTTTTTTCCAACATCGGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCAAAGGGGAAGCTGAGGTTTTCCTATGGAGGAGGGTCAGATCCCTCTCTTCCTCATCTCCCTCCCCCTCCCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TTCTCTGTTTCCAGCTCCCTGTGGACTCTGTCCCACCCACAAGCTCGAGGCTGCTGCCACATGGAAGGCCGGGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAGAGACGGGCGGCCAGGACAGGGGCCGGCTGTTTGCAGGGGAGGCATGTGTGTGGAGAACGCCTAGGAGCACG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGGGTGGCCACGAACCCTGACCGTGCAGGTCGAGAAACTCTTCCAGGATAGTATGTGGTGGATCGTGTCTGCCT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AAAAGGTATGTCCAAGTCCTGACCCCAGGACCTGTGAAGGTGGCCTGATTTGGAAGGAAGGTTTTGTAGATGTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CTCAAGTTAAGATGAGGTCATCCTGGATTACAGTGGGCTCTAAATGCAATGACTGATGTTCTTACAAGAGAAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAGAGGGATTTTTTTTTTTGAGACAGAGTTTCACTCTTGTTGCCGAGGCTGGAGTGCGATGGTGCGATCTCAGC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TCACTGCCACCTCCGCCTCCCGGGTTCAAGCAATCTCCTGCCTCAGACTCCAGAGTAGCTGGGATTACAGGTGT 740
Query 1 -----------------------------------------AT-GGGGTTTCTCCATGTCGGTCAGGCTGGTCT 32
|| ||||||||.||||||.||.|||||||||||
Sbjct 741 CCGCCACCACACCTGGCTAATTTTTTGTATTTTTAGTAGAGATGGGGGTTTCACCATGTTGGCCAGGCTGGTCT 814
Query 33 GGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC---------------------------------- 72
.|||||||||||||.|||||||||.||||.||||||||||
Sbjct 815 CGAACTCCTGACCTTAGGTGATCCACCCATCTCAGCCTCCCAAAATGCTGGGATTAGAGGCATGCAGCACTGTG 888
Query 73 -------------------------------------------------------------------------- 72
Sbjct 889 CCTGGTCAAGGAGAGGGAATTTTGGACATAGATACACGGCATTTCACACAGGGAGAAACACCACATGACAATGG 962
Query 73 -------------------------------------------------------------------------- 72
Sbjct 963 AGGCAGAGATTTGGAATGACATGGCTACAAGGCCAGGGACACCAGGGATTGCCGCAGCCACCAGAAGCTGGAAG 1036
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1037 AGGTGAAGACAGAGCCTCCTGCAGAGCTCCCACTCTGCCAACGCCTTGACTTTGCACTTCTGGCCTCCAGGACT 1110
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1111 GTGTGTGTGTGGGGGGCTGCTTCTGCTGTTTCAGGACGCCCACCTGTGGTGCCGCCTTGCAGCAGCCCTACAGG 1184
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1185 GTAACATGCAGGGAAGTGGGAAGTAAGTGGAGACTTGCAGGATGCAGAAGGTGCAGGTGAAGGTGCTGAGGAGG 1258
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1259 GAAACAGCGTTCTGGGCAGAGGGCACGGCTGTGCAAAGGCCCTGTTGCACAGACACTGTGAGTGGAGTTTGAGT 1332
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1333 GTGGCATGAAGTGACCTAATAGAACAGAATCTGCGAATGCACGGGGTGCACTCATGGGGGGATTGGGGGAGTGA 1406
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1407 CTTAGACCACGCACACAGACAATGTTCTTCACCCGTTTTGAACAGTGAGTCAATTCTGCCCATGAGCAAGTCTT 1480
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1481 CCAGACTGTTGGGCCCTAGACGAAGAACGACCTGCAAGCCGGGAATTCTCTGCAAAGGACAATGTCAAAACTCA 1554
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1555 TCTGAGGCATCCATGTCTGTCCTACAGCAAGCTTCCCCGTGACACTGGAGGGACCTAGGCTCCCGGCAGTTTTC 1628
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1629 AGGAGCCAGCCCTGGGCTAGGGGCTCCACAGTACTTGCAAACAAAGAGTTCCAAAAACCCAATTTGCATTCACC 1702
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1703 CATGTAAGAAGTGCCTGATAAGGAAGTAGCGTCTCTATTTCCTGGGATGGGGATTTTTGCTCTGGGGTATCAGA 1776
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1777 TAATATTATTTGTAAGCTAGTCATCACCATCCTTCGTTTTCTTCTGCCTTAGCAGATTCAGGTAGATTTATGGC 1850
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1851 ACTGACTATCACTGCTTTAAAGTTATCAAAAATCACTTTAAAAGAAAATGACGAGATTGCAGAAAAGTGGAGTT 1924
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1925 TATTGAAAATCTGACTGTGGTCCCTTGAAGTTACTGCTTACAGGATCAGCTGACTTTGGAGAGAAAGCCATTAT 1998
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1999 CAGAATCAAGCAGCAAATTACTGGCCCCAGAGTTCCTAGCTTGCTACAATATCAGCTGTCTAAACCAAAACAAA 2072
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2073 GCATTTTGTTGAAGCGGGGAAAAAAAGGCAGATCAAAGAGTAGCTCATCCACGTGTCAGTTAGATTAGCATTTG 2146
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2147 AAATTCCTTGTGAATGTATCCACATGTTTATGACAGGCATGGTGTTCAGCTTTAGCAGCATTATGGGGAGTTAC 2220
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2221 GAAATTCTCTGTGTAAAAATAGCGAGGTCATGAGGAAACCACTCTTGCTGTGTAAGTCCTGACAAGCCATGCCA 2294
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2295 ACACCGTCACGCTGGGACTGGCCTTCGGATGGCACGGGGAGGGCAGAGTCACGCAGGCACACGTGACACGCCCT 2368
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2369 TGCTCTGCGGCCGGTGGGATCCCTGGTAGCTTCGCAGTCATGTGGGGCTTAGTCACAGGAGCATAGGTCAGGTC 2442
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2443 CTGCTGAGCCCCCTTTCCAAGTGTGCGGTGCGCAAGCCGCCCAACCCAGGGGCCGGCAGCTGGGACAGGGCGAG 2516
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2517 CAGTGGGCTGCAGGGAGGAAGTGGGGAAGGCCTGGGGGCAGACGTGCCTGGGCGAGGGCCTTCCTATTCCTGCT 2590
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2591 CTCCCTGTCTGCTCTGAGGATGTGGGCCCTGACCTCCTTATCTGTAAAGCCCTGATGGTGGATGCAGCTTCCTG 2664
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2665 GAGCTGCTGTGGAAACCACTGGTTAATATTTTACAGGTCGCTGGGTTACAAACTGTCAAGTCAGAGGAACACTA 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 CACGCTGGCACCAGCTGCTCCTCTGTAGCCACCCGTATGTCCCTCCTGAGCCGTGGCAGGGAGTGACACCTTTG 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 CCAATACCACCATCCACAGGGTCAACATGACCCCGGGCCCTGGTCTTAGTAACTAGAGGAAACACACCGACTTC 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 AGGCATTGCTCACAGCCAGAGCTGGTGTTAACTGAAGAATGTTTTAATTCACCTGCCGAGGAACTCACACATTC 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 CTTGCCAGCAGGCACAATGGCTCTTGATAGCCTGTGTGCAGGGAACAAATGTGTTGGCCCCATGCTCAGGCCAT 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 GCGTACACATAAGAGCTGTCGTCTGGGTCTTGGCTAAAATAAACTGAATCTTCCCGAAAACACAGGTTCCTATT 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 ACGGAGTCCATGATAGGAAAGATGTTCAGCTCTGCTGCTATCATGGGGAAGTAGAGTGGTTGATCTGAAATCTC 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 CAGATTCTAATCAAGGAGAAGAATGCTGTGCTGTGGCCACAGACCCCACCGTGGTCTCAAAGAAAACCTGGATC 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 AGAGCCCATCTTCTGATCAGTGCCACACCTTCACATGGGTGTGCAGCATTTTACTGGGTGACTGCCTTTCAGAA 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 CCTTCTGGAATTTTCCAGATCCTTCCAGATTGCAATAAAGAAAAAGAATGCAATGTGTGGTCATTAATCTCAGC 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 ATGGTCCTGCAGAAGAACTGGCTCTGAGCTGATCTCCTAAGGGGCCCCACGTCTTCACATGGGTGTGTAGTATT 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 TTACTGGGCAACTGCCTTTCAGAACCTTCTGGAATTTTCCAGAGCCTTCCAGGTTCTAATCAAGGAAAAGAAGG 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 CAATGTGTGGTCATTAACCTCACTGTGGTCCCTCAGAAGACCTGGCTCTGAGCTGTCTCCTGAGGGGCCCCACA 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 TCTTCACATGAGTGTGCAGCACTTTACTGGGCAACTGCCTTTCAGAACCTTCTGGAACTTTCCAGAGTCTTCCA 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 GATTCTAATCAAGAAAGAGAATGCAATGTGTGGTCATTAACCTCACCATGGTCTCACGAAAGACCTGGCTCTGA 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 GCTGATCTCCTAAAGGGCCCCATGTTTTCACATGGGCATGCAGCATTTTACCGGGTGAGTCCTTAACTTCGCAG 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 GACACATTAGAAAGACAAAGGATGCTAGCAAGTGACAATTATATTTAAAGAAAAGGGCAGGAGACACAGCATGA 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 AACAGAATGATGCATTGAACAGAACTAGATTTGGGCTCAGGAGAGCTTGGAGAGCAGCCAGCATCGACGGGGCG 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 CTTACTATGGGCTAGGTGCTCATGCAACAGGTCAGAAGTATAGCTTCTTAGTCCTGTCTACTGTACAAGGAGGC 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 AAGTGCTATTATTATGCTCCCCACTTTACAGACGTTGAAACTCATGAGGTTTAGAAAGCCCGAGTAATGCGTGA 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 CCAGCCTGGCCAACACGGCGAAACCCCGTCTCTGCTAAAAATACAAAACTTCACCGCGTATGGTGGTGCATGCC 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 TGTAATCCCAGCTACTGGGAAGGCTGAGGCAGGAGAATCTCTTGAACCCAGTAGGCAGAGGTTGCACTGAGGCA 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 CTGAGTCGAGATTGGGCCACTGCACTCCAGCCTGGGAGACAGAGTGAGACTCTGTCTCAAAAAAAAAACAAAAC 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 AAACAAAGAAAGCAAGCCCAAGGAACACAAGTCCACACAGCAGGACCTGACACCAACACCAACAGGTCGGAGCT 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 GAGCTGTGCTCCTGGCTGCTACGTGGTTTGTGACTTCACCAACCTGATGACCTGGTCTTTGGTTTCTTGATACT 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 TGAAGTCCTGGATTTCTTACGGAAAAGACCTCCTTCAAAAGGCTAGAGGGTGCTTTCTCCTTCACGTCACATGT 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 ATGCTCTGAAGACTCAAAATATAGTAACAACTCCACAACTCATTTCCTTCTACATGAAAACTATCACAGAGTAA 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 CAATAAATTATGAAGAACTATAGGAATTTGTCATTAAGTGAAGTATCTTTTAAAACTCTGTTATTAAAAATGGC 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 ATTTAAATGAATGATTCAATAATAAACACCTAGCATGCATGGTGTATGTTATGAACATAAGACTGCCACTGAGC 4810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4811 TTGCATTCTGAACTTGAACTTTTCGAGTGTTTTCTGCATGCCATTAAATTTCTACATGATATTTTTGGGCCTAA 4884
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4885 AAAGATCAGTAGCCTTCAAAAGGTGACGATTTATTATCACTAGGTAGAGGCCTTATAATTTTATGCCTACATCA 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 AAATCAAGATTATCCAGGAAGGCTTTTCACAAGGGGTAAAGAACAGGGTTTGAAAGATGCAAACACGTTGGCAG 5032
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5033 AACACATTCATAGTTCCGTGGCTTGCCTGATAGATTGTGACTGTCCTGAAATTATAATAAAGTGTCTGAACTAT 5106
Query 73 ---------------- 72
Sbjct 5107 TGATACTTCTCCAGAA 5122
