Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- XR_001754564.2
- Aligned Length:
- 6943
- Identities:
- 64
- Gaps:
- 6871
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGGAGTCTCCTATGTCTACTTCTTTCTACACAGACACAGTAACAATCTGATCTCTCTTTCTTTTCCCCACAATC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TATGAGACCAGAGTGATACTGAGAAGAAATGAAATGGAGATAGGGAAGAAGGAAGCCGCTCCTCTCTACAGGAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCCAAATCAATGCAGGAGGAGATTCTGAGAACTACTGGACAACGGCCACAGGGGAACAGGGGATTCATTCCATC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCAAAGCCTCACCCTACACATTATCTTTATTAGCTATAAAAGGGAAAAGGGATTTGCAATGGAGAGTTATGGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GACTCCAGCCTCATGAAGTGACACAACTTAGCATTGCCACCCAGGGGACAAACCCACACTATGAGTCTGATTCA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGCACCAAGAAGGACAAACATCACTTACTCTGCTATAACATAACGCAGTATATTATACACTAACATATGTAGT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ATATTACATTACATAATAACATAGTACAGGCTTCTAGGACACAGTTTATAGAAGTGCAGATAATACTTGAGGCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTTTCCCAAACTTGCAAATAAAAACTCTCCACAGGGCTTGTGACTAGCACATTCCCAAAGCCCCAAACCCAGAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TTCCACCTGCTTAGTGAGCACCTCCAGAGCACTTTTTTTTTTTTTTTTTTTTGAGACGGAGTTTTGCTCTTGTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GCCCAGGCTGGAGTGCAATGGCAGGATCTCGGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCGATTCTCGTG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CCTCAGCCTCCTGAGCAGCTGGGATTACAGGCACCCACCTAATTTTTGTATTTTTAGTAGAGATGGAGTTTCAC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CATGTTGGTCAGGCTGGTCTTGAACTCCCAACCTCAGGTGATCCACCCACCTTGGCCTCCCAAAGTGCTAGGAT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TACAGGCACGAGCCACTGCGCTCGGCCATCTCTAGGGCATATTTTTACTGTGCAATGTGGGAATCTCTGCCATA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGGTGGGCTGCCTTTCTAACCCAGTGGCCCGGTTCTAGCAGGACTTCCCCAGTATGTGGATGGGGGCACAGGGA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CTCTTGGGGGGGCCTCAAGGCATCTGTGAGCTAGGCCTAACCACCGCTACTGAATGACTGCGAGATGAGTCCCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GAGCTGGGACGAGAGTGGGCCTGGTACCCTGCCCCAGCCCTCCCCTGACAGGAGTTAGTAAGGGACAGGTTAGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATGCTAAAGAGATAGCAAGCTGGTCACAGCCTAGGGCCACCACCCTTCTGTCTTACAAGTCAGAAACATGTCCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GACTTTGGGGGAGAGGGTATATGTTAAACGGGCCCACCCTGGGAGCTGTAGTGGTCACTGTGGAGCTGAGCACT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGGCTGCACTCCTCGCTGCCCCAGAGTGACCAGGTGGGTGGTTTCATCCAAGAGGCAGGGCTCAGAAGGCCAGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTGAGCCACCGATATGCATGTCTGCACCCCACCACTTCCTGCTCAGTCTGTATCAGGCCCGGGATGAAATCGTC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ACTTAGACGCTCAGGGGTCCTCCCACCCATCTGGCCAACACAAACCTGCCAGCATAGCACTGAGTGGAAGGTTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CAGTGCACCCACAGGCCTGGCTGTTAAAATGTCCGGCCTCTCCAGAGGACAGGTTAAGTTCACACTGAGAAAGC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CTGGCTCTCTCCAGCTAGCCTGAATTAAAGTGAGAAGGATGAGCACAGCACCTGTGGAAATGGCGCTGGAAAGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AAGTGTACCTAGGAACTGCCTCTGGGCCACCGAAGTGCGCCGGCCCAGTGTTCTCAGACAACCCAGGAGGAGTC 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTCCATCTGGCCACTTCCCACCCGTTAGGCCCCGAGGGGACACCAGGTTGGTGAGACCCGGACCCCACCAGCAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 AGGACCCTTCCTTCATTCATCACACACTGGCTCCATCTGCACTGCACCTACTGCCAGCCAGGCACTGAGCTTCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CATCCGCACAAAACACAAAGACCTCTGATACGGTTTGGGTCTGTGTTCCCACCTAAACCTCGTGGTGAATTGTG 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATTATGTTGAGTTGTTTTGGAGGTAGGGCCTGGTGAGAAGTGACTCGATGATGGGGTGGATTTCTCATGAATGG 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TTTAGCACCATCTCCTTGATGCTGTTCTTAAGATAGTGAGTTTTCACGAAATCTGGTTGTTTAAAAGTGTGCGC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CCCACCCCTTGCTTCTGCTCTGGCCATGTGATCTGCCTGCCTTCCCCTTCGCCTTCCACCATGATTGTAAGATT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 CCTGAGGCCTCCCCAGAGGCTGAGCAGATATCGGTACTACGCTTGCTATACAGCCTGCAGAACTATGAGCCAAT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TAAACCTCTTTTCTTTATAAATTACCCAGTCTCAAGTATTTAGAGCAATGCAAAAATGGACTACTACAACCTCA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 CGGTTCTGGAGGCTGAAAAGTCTAAGGATGGAGTGTCCTTCTCAGTGTGCAGTCAAGATGCCGGCAGGTTTGGG 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 GCCTGGTGAGGCTCTTTGCTTCTTCCATGGTGTCTTTTGCACGGTGCGTCCTCCGGAGGGGAGGAAGGCTGCAT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GCTTACATGGCAGAAGGTGAAAAGCCAAGAGAGAACCCACTCCCAAAGCCCTCTCAGTAAGGCATTAAACCCAC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 CATAAGGGTGCAGCTCTCATGGCTTAATCGCCTCTTAAAGGCGCCACCTCCCAATACCATTACACCAGCAATCG 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AAATTCAACACGAGTTCTGGAGGGGAAGGCATTCAAACCCTTGCCCCTTCTCTGAACCGGTGGGACTTGCCCAG 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 CATGCCAGACTGCCTGGGCTCTGACTCCTTCCTCAGCCTGTGTCACTACGGCCCACAGTTGCATCAAAGCATGC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TGCTCTCCATCTCCAGACTCCCAGCCTGGCATTTCCAATATTCTCCCCTTTCACAGCCCCTCAAATCCAAATCC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 TACAGCAAATGCCGGAGATTCTATTTCAGTCCTTTCTTGTCAGGACTGACAGTGTCAGCTGGAGCCCCTGTCCT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TTGGGACACCTGTGAAATGGTCCTGAACACCTCAAGTTGGACCCCCTCAATATCAGTTTGGGGGTGTCCCTGAT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GTCACCCACTAACCCTAATGTGCTTCTCAGCGCCTTCAGTTTCCACATCAACACAACTCCTTATAGGTTAGTAC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 AATCCCTTTGAAAAACTGGCAGTGTTCACTGAACAAATGCCTCCCTATGACCCAGCAATTCTACTCCAAAGAAA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 ACACCCAACAGAAATGAATACTTATGCTCACCCCAAGGCAAGTACAAGAACGTTCAGAACAGCCCTATTCAGAA 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 CAGTCCCAAACTGGAAATGATGCAAACGTCTGTCATCACTGGAATGGATAAATACACTGTGGCATATTCACACC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 AACACAAGGATGAGTCACCTACGACTTCGCTCTCCCACATGGATGAGTAATGCTGTGTGAGGGACCAGCCCAAA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 AGAGCACATCCTGTTCCCCAAAGCCCTCAGGCGTCAGACCTCTACCCTGTTAGGAAGGACAGTGGCTGAACCTC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CCGCTGCATGCAACTGGAGGGGCTGTGAGGAGTGGGGTCTGGAGAAGCTCTTCATTGCAGTCTGGTGTATGCAA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 GTGTGACAGTGTACTATGGGCACACTTGGCAACCACCACCTGTGGGCAGCATCTGTGGGTGTGACAGACCTCCC 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TGGACCTGGGCCATGGGCCTGCGGGGTCCCACATCCCACGGTCATGGGCCGTCCACCATCTTCCTCCCTACCTT 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 ATCTAATGCCTCCTGGCCCTCCCCACACCCAACAGGGCTCTAGGTCCTTCGTTAAGGCCAGTGGTACCAGCGAC 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 ACCCAGGCCTTCTCCACAAGCTACAAGGAATCTGCCCAGCAGCCAGTCTTCCCAGGAGGAGGCCGGGGGCCACC 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 GGCTCAGGACTTGCCTTGCATTTTTTTTTTTTTTGGCATGATCTAGGCTCATTGCGACCTCCACCTCCCAGGTT 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 CAAGCGGTTCTCCTGCCTCAGCTTCCTGAGTAGCTGGAATTGCAGGCACCCACCACTGCACCTGGCTAATTTTT 3996
Query 1 ----------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGC 58
|.||||||||..|||||.||.|||||||||||..||||||||||||||||||||||.|
Sbjct 3997 TGTATTTTTAGTAGAGACGGGGTTTCATCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCCAC 4070
Query 59 CCACCTCAGCCTCC------------------------------------------------------------ 72
||||||||||||||
Sbjct 4071 CCACCTCAGCCTCCCAAAGTGCAGGGATTACAGGCATGAGCCACCGCGCCCAGCCATTGTGTTTTGTTCCTTGT 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 GGGGATGCACATCCCTCTTCCAACCTGTGGCTACTGCTCTTGGGGTCCTGTTGCTGGGGGCCCTGCAGTAGACT 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 CCACACAGGTCCTCCTGCCTCCTGGGCCCTCCTCAGAGCCTCCACAGGCTGCAGACTCCACTCCCCAGATGGAG 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 GTCTGAGCCCGGCACCCTTCCTGCAAACCACTACCTCACAAAAAAGACAAGAATCCTACACCCCCAACCCAGAC 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 CCCTTCCTGGCAGGTCCTCAGGCTGGGCATGGGCAGAGCAAAGACAGACTTGAGGAGGTAACCAGGGTGAAGGC 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 AAACACTGGGCCAAAACCAGTGGGCATCCTGATGTGTGGATTCCAAAGGGACCAGGCGAGCAGGGAGCAGTACT 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 GATGTCAGGGAGGCCGGAGGGAGACAGAGGAAGCCCGTAATCAGGGAGCTTGGGAGCTGCCTGCTGGGCAGGGA 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 GGAGCTGTGGACACCAATCGGGCACTCTCAAGCCCTTCCCAGCCTGGCTGTCTCCCTCCTCTGGCCCTTCGGTG 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 TTTCCCTTGGGAGTGGTGTGGGTCCCTACCTGGACTCATCCTGAGGAAGCTGCCTCCTGGAGCAGGCAGGATGC 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 TGGAGCTCCGTGTGGCCGGCCCTGGTTCTCTGCGAAGCCGCTCCTGAGAGCCTGCCTAGTGCAGAAGTGCCCCG 4810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4811 AGCTGGCTGCTCTTCCTGCCTAAAACGGGGCACTGAGCACAGGAGCCTCTGGATCTGATCCCCTGCCTGTTTTT 4884
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4885 GTACGGCTCTCAAGCTAGGAATACCTTTTACATTTTTAAATGATTGAAAAAAAAATCCAAGTAATCATGGTGTT 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 AAAATGATATGAAATTTGAATTTCAGTGTCCATAAATCAAGTTGGGACACAGCTTCTCTCATTCATTTACAGTT 5032
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5033 GTCTAAGTTTCTGTCACTCTTCGGCAGCAGAGGTGAGCAGCCAAAACAGAGACTGCATGGCCTGCAAAGCCTGA 5106
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5107 AATATTTACCGGCTGCTCTTTACAGAAAGAGTTGGCCGTTCACTACCCTGGAGTGTGGACCTCTGGGCGAGGAA 5180
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5181 CCTGTATCCGTAGCGCTGCCTTGCACGTCCAGGCTCACAGGTGAGTCCTCAGGAAGGAGTCCCGTTGGTTCTCT 5254
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5255 ATGCAGCATGCCAGGCAACAGGGTGCTTGGGAGGGGAGGCAGGCTGGCCTGGGCAGGAGGATTCTTGGAGGCTC 5328
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5329 CTTTAAAATTCACTGCCTCACTCAGGGTGATGCACATTAAAACTCCATGGAGCCAGGTGTGGTGGCATGCACCT 5402
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5403 GTAGTTCCAGCTACTCCGAAGCTGAGGTGGGAGAATCACTTGAGCTCAGGAGTTTGAGTCCAGCCTGGGCAACT 5476
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5477 TAGTGAGACCCTATCTGTTCAAAAAATGACAACAGCATAATAGGACAGCAGTACTCCCCCCAGAACAGTTAATA 5550
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5551 TTAAAATTACGGACAGTACCAAGTGCTAGCATGGATGTGGAGCAACTGGAATCCTCACACACTGCTAATGGGAG 5624
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5625 AGTAAAATGTTACAGCCATGTTGGTAGGTTTTTTTTTTTTGGAGACGGAGTTTCGCTCTGTCGCCCAGGCTGGA 5698
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5699 GTGCAGTGGCACCATCTCAGCTCACTGCAAGCTCTGCTTACCAGGTTCACACCATTCTCCTGCCTCAGCCTCCC 5772
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5773 GAGCAGCTCGGACTACAGGCGCCCGCCACCACGCCCAGCTAATTTTTTTGTATTTTTAGTAGAGACGTGGTTTC 5846
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5847 ACTGTGTTAGCCAGGATGGTCTCGATATGCTGACCTCGTGATCCGCCCACCTCAGCCTCCCAAAGTGCTGGGAT 5920
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5921 TACAGGCGTGAGGCACCGCGCCCGGCCATTAGTAGGTTCTTATAACCGGTTATAACTGGTTGGTAGGTTCTTAT 5994
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5995 AAAGTTAAACATTCACATGACATATGACCCAGCCATTCTGCCTTTAGATATTCATCCAAAAGAAATAAAAATAT 6068
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6069 ATGCCTATAAAAGCCTTGCACAAGAATGGACACAGAAGACTTATTCATTAAAGCTCCAAAGAGGAAACGGCCCA 6142
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6143 GGGGAATATCAACAGGCAAATGAAGAAACAAAGTGTGAGGCAACCTCCCGTCACTCAACAGGTGGCTGAGGGAC 6216
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6217 CCCCGCACCAGGGCAGCACCTGCTGGACTTGGGTTCACCAGCGAACGAGCAGGTCTGATGCTCCTCTCAGGGTC 6290
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6291 TAAGCCGAATCCAAGAATCTGATGAGTGTGAAGACACTGGAAGAACCTGATCACGCAGGCTCCTTTCTCAAGCA 6364
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6365 CCCCGATGCCCGCAGGTGAAGGGGCACATGCCAAGGACAAGCCCGCCTCAGCCCTGGACATCGTTCATCGCGCG 6438
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6439 AGTGAGCAATGCTTGAGTGAGAAACCTGACAGCGGTGTCCCCATAACTTCCACCGCCTCTGGAGCCACCCGGCA 6512
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6513 AAAGCCAGCGTCTGACAATCCTTCAGTAATAGTGAAGACACCTGTTATATTGCTGTCCAGCCAAAAGCTCCTTG 6586
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6587 TTGCAGGATGAACAGCCCCAGTTGTTTCAAACATGCCCCACATCTCATGGCCTCCACACAGGTCGTATTAAACA 6660
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6661 CCTCTAACAGAGACTGCACGCCAAGTGTGGCTCCTCAAAGACCTTGCCTGGGGACTCTGCCACTGATGGCTGCG 6734
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6735 ACCTGCACACTCCTGAGAGCTCCTTCCTGGAACTGCCTCATTTCTCTCATCATCCTTGATTTTTTGAGATGGAG 6808
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6809 TCTCAGTCTTGCTCTGTCACCCAGGCTGGAGTGCAGTGGTGCGATCTCTGCTCACTGCAACCTTCACCTCCCGG 6882
Query 73 ------------------------------------------------------------- 72
Sbjct 6883 GTTCAAGTGATTCTCCTGCCTCAGCCTCTGGAGTAGCTGGGACTACAGGCATGCACCACCA 6943
