Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10261
Subject:
XR_001755092.1
Aligned Length:
3486
Identities:
63
Gaps:
3414

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CAGGCGTGAGCCACCGCGGCCGGCCTGTCTGCACTCTTTATTCTTTAACTTTCGTTACAGTGTTACATACAGAG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AAGTGCACAGAGCAGAAGGGGATGGCTAGCAAGTTACCACAACGCCTGGCAGAGAAGCAGAACTCTGGACATCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  ACGAGCCCTCCTGGCGCCCCGCCCTGCCCCCCCGGGGCTGCTCTGTTTTTCATCTGGCTTTCCTACCAGTGCGG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAAACGGAAGGAGGACTTTTTCTGGAAAATCAGTGTCTGCGCTTCCCACCGGGCGGGTTGGACCTGAAGACACG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TCCGTCCCGCGGAGAATACGCGACACCGTGACCGACACGCGGCAGTCCTGCCTTAGAAGCGCGGCCGGGCCGGC  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCGGGACCCGCAGCCTGGGGACCTTCCTCGCGCCCCAGAGGGGTCTGGGTGGAACGGGAAAATTAAAAATTAAA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  AAAAAAAAAAAAAACGGAAAGGCAAGAAAGGAAGAAGTCCGCTGGAGAACTCCGTGCGAAGGCCCCACTCCTAC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  ACGTCCCCGGCCTCAAGGGGAGACGAGGAAGAGAGCGGCCCAACCTGGGCCTGGGAGTATCGTGACCCATGTGT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TTAAAGAACTAAAACGTGGCGTTAAAAATAAGTGGACGGGACACCATCAGAACTGTTTTTTTTGTTTGTTTTGT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTTTAGATGGAGTCTCACTCTGTCGCCAGGCTGGAGTGCAATGGCGCGATCTGGGCTCACTGCAACCTCCACCT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CCTGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGCACCCTCCTGTGTAGCTGGGATTACAGGCACGTGCCAC  814

Query    1  ---------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCT  41
                                             ||||||||||.||||||.||.|||||||||||.|||||.||
Sbjct  815  CACGGCTGCCTAATTTTTGTATTTTTAGCAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTGCT  888

Query   42  GACCTCAGGTGATCCGCCCACCTCAGCCTCC-------------------------------------------  72
            ||||||||.||||||.|||.||.||||||||                                           
Sbjct  889  GACCTCAGTTGATCCACCCGCCACAGCCTCCCAAAGTTGGAATTAAAGGTGTGAGCCACCGCACCCTGCCACAC  962

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct  963  TGTCAGAATTGAGGAGGCAGATATGAGAAACATCTTAGGAATAAAAAAGAATAAATGAATTTGAAAACAATGAA  1036

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1037  TAGGCTAAGCAGCAAATTAGATGCAAATACATATAAAATTAGCGAACTGGAAGATATATTTGAAGAAGTCACCC  1110

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1111  AGAGTGCAACACAGACAAAGGGTGAAAAATAAGTTCTCTTTAGTGGTTAGCATTGTGATGGAGTAAAAAGGCCC  1184

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1185  CACGTGGCCTAACTGGGGCTCTAGGAGGAAAAAAAGTGGATTAAATGGGCCAAGGTAATAGGGAAGAGATGTGA  1258

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1259  ATGGAAAGGCACCATTTCTCAGACTCTGAAGCTTCAGAGAATCTAAGCAGAGTGTGTTTGAAGAAAACCACATC  1332

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1333  TGGACACACCTGTTGTAACTGGAGATTCTCAAAGACAAAGATTATAAAAGCAACTGGAGAGAAGAATGAGTAAC  1406

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1407  TGTTGAACGGCACTGAAACCAACACCTAAACAGCAATAGGGGAAGCCGTGAGAAGCAGAGGTCTCAAATACCTG  1480

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1481  GGAGGAAACAGCTTTCAACAAGAACTGTTCATCCCATGATATACCTTTCAAGAATGAGAGTAAAACAAAAGCAT  1554

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1555  TTGTAGTTAAACAAAAACTAAGACTTCCACTTTGAGCCACGACAGAATAACTGGTCCAGATTTACTCTCTCACC  1628

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1629  TTAAACAACTAGAAAGAAGGACAAAATATATGCAAAAATGTCTTTTGAGACATGGGACAGCGGTCAGAATTGGG  1702

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1703  CAGCAGTTACTGAGAGAGGAGAAACTAATGAGGAGAGACCTTCCAGCCCCTGGCTACTGTCTGGAGAGGAGCTC  1776

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1777  CAGGCCAGAGCCTGAGAGGGGGTACCCAGATAAGGCGGGGTCTTGCTGCGGCAGAGACTGAGTTATAAGTTGGG  1850

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1851  GGAAGCCAAGGCAACCAGAATTTTCAGGGCTGAGTACAAGAGAAGAGGGAGCTACAGAGAGAGAAAGAGATGGG  1924

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1925  GAAGGAGAGAAAGAGATGGGGGAGGAGAGAAAGAGATGGGGTGAGAGAAGGCGAGAGGGAGACCCACCCAGAGA  1998

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 1999  ACTGTGGCTGAGCACTGATCTACGCATGCCTATGAAGAAATTACCTGAGGGGAAAAGAACCACTAGAAAGGAGG  2072

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2073  AGGCAGAACATCCGGAGGAGCTCGAACAGGGCTGGGATTGTTCGTGTTCCCACAAGCCAGAGTGGAAAGACCTC  2146

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2147  CTAATTCAAAGGGCATCGTGGAGGCTGCAGCAGGGTAGTGTGTCAGCAATGGGGCCAGATTAGCCCCAGGCTGA  2220

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2221  AGGACCCACACTAACGAGGCTTCTAAGCAATCCTCAAAAGGATTCCAACACAACCCAAGAATATTCAAAGTAAT  2294

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2295  ACCAAAAATTCAGCACCCACCCATGTACCTTTCACAATGTCTATACCATTCAATCAAAAACTATCACACATAGA  2368

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2369  AGCAGGAAAATATGATTCATACCCAGGGTCAAAATCCATCAATAGAAACAGACCCAGAGAAGACAGATACAATG  2442

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2443  GGATTTGTATACAAGAACAGTGAGGCAGTGCTAACTAGATTTCATATGCTCAAAAAGGTAGAAGAAGGCATGGG  2516

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2517  CGTGATGAAGAGGTTCTTTTTCAATGAACATAAAACAATTGCCAACATTCCTTAACAGCATATAAAATAGTGGT  2590

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2591  ACATCTTAAAAGTGGTGCTACCTTAAATTTTTGGTGAAATGTGGTAACAGCATCTATTACAACCTGCCTGGTGT  2664

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2665  TTATCCCCCTTGGAATGTAACCATTACTTTAATTTATTTATCATTTTAGAATGAAGTTGGGAGCAAGAGGGAGT  2738

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2739  GGACTCTCATTCACTGACTTACTCATTCTGTTATCACATGCGTACTGAAAATTCAGAGTAAAACCTCGTACTGT  2812

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2813  GCAACCCAGAATTTACCAAGATGAGAATAATGAGATATATAAACCAATAACTCTACACAAAGTGCTGCAAGAGA  2886

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2887  AGATTAACATGAGACAGAAGGAGTTCAGAGGCGAGGAGAAGTCAAGGCTGGCCACACAGCAGAAGAGGAACTTT  2960

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2961  GGCTGGGCTTGGATGATGGGGCATTTGGACAAGTGAAGCAGTGGAGAATTTCTTTGAGGGACCTGGGCCTCCAC  3034

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3035  CAGCCCTTTGTATGAATTAGAAAGGGACTTTTTCTCTGTTGCCCAACACTGCAGGTGCACTACTTGGGAAGTGA  3108

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3109  ACGGCACCTTTGAAATGAGGTGCTACTGAAACAAAAGCCTAAAACTGGGGAAATCATCTTAGGGATGGAAGTGT  3182

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3183  GGGCTAAGAGACCTCAATGAGACTGATAGTAAAGTCTCAAAGTTCAGTGAGGGAACACCTGGAAAGATGGAAAA  3256

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3257  GAGTGACTGCTGTCATGTAGCAGCAGAAACGTTAGTTAAAATATCCTTTGGGGAAACCAGGACACCAAAAAATA  3330

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3331  TACCACATGAGCTTGTGGGTTTGACTGAAGAGACTTTGAGGCAGACTGTCATAATTGGCAACTGCTTTCTTTTA  3404

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3405  GCTGTGTGTAATATAGATAAAATAATGAAGGAATGTCCCATTTTTGAGCAAAATTTAAAGAAAATATAAAGGTG  3478

Query   73  --------  72
                    
Sbjct 3479  TCAGGACT  3486

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