Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10261
Subject:
XR_001755383.1
Aligned Length:
5052
Identities:
64
Gaps:
4980

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  CCAGGAGTCTCTCTGCTGCCAGCCCCGCCCAGACTCCAGGCAGGTTCTCGTTGCTATGGTGATCGCCGGTGCAA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GCTGGATGCTTGGACGCGCCGCTGCCAGTCCAACGCAGACCCCGCCCACGACGTCGACGATTCGTGTAGCCCGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGGTCCCGCGTGGCTCTCGTTGCCATGGTGATCGCCGCCGCTGGCTCAGGCGGACCAGGCCGCGCGGAGCCCCA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GCTTTCACAGCCATCGCTGGACTGTGGAAGAATGAGGTCCTCCCTGACACCTTTGGGGCCCCCTGTGAGCCGCG  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  ACCGTGTCATCGCCAGCTTCCCTAAGTGGTACACGCCGGAAGCCTGTTTGCAGCTCAGGGAGCACTTCCACGGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  CAGGTCAGCGCTGCCTGCCAACGCAGGAACACGGGGACTGTCGGGCTCAAACTCTCCAAGGTGGTGGTGGTTGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  CGATCTCTACGTGGGGAAGACCAGCCTCATCCACAGGTTTTGCAAGAATGTTTTTGATCGAGACTACAAGGCCA  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CCATTGGGGTGGACTTTGAAATTGAGCGCTTTGAGATTGCTGGGATTCCCTATAGCCTCCAGATCTGGGACACA  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  GCTGGGCAGGAGAAGTTCAAGTGCATCGCATCTGCCTACTACCGGGGTGCCCAGGTGATCATCACGGCCTTTGA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  CCTCACTGACGTGCAGACCCTGGAGCATACCAGGCAGTGGTTGGAGGATGCTCTGAGGGAGAACGAGGCAGGCT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  CCTGCTTCATCTTCCTCGTGGGAACCAAGAAGGACCTTCTGGCGAGAACGTGAAGGCATTCTTCAGCCGCGTAG  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CCGCCCTGGCATTCGAGCAGTCGGTGCTGCAGGACCTGGAGAGGCAGAGCAGTGCCCGGCTCCAGGTCGGCAAT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GGAGACCTAATCCAAATGGAAGGGAGTCCGCCCGAGACCCAGGAGAGCAAGAGGCCCTCCAGCCTGGGCTGCTG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CTAACTGGGGCCTGCGTGGAAGGCCTCCGCTCCCTGCACACACACGGACAGGAATTTCCGTGACTGTGGTGTGG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  AGACTGGAGCCCAAGCTCTGCAGCGTGTCGCCCTCAAGCTGTAGGCCCATGTTCCAGTCCCTCCACCCACCCAC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CGGGCTCAGCTCCAGGGCACAGTCACTTGTCCGTTGCAGGTTGGGCACTAGAAAAGGCCCCCACTGGCTGCCTG  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GGAGCCCCACACCACCGGGCCAGTGCAGGCACTGTGGTGATCCCATAAAAGGCCAGTCCATTTGCAGGGTCATC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  AGACAGTCACCTTTGGCCTCAAGAGGCCTCAGAACTGCAAACTCCTGCGTCGGTCTATACTACTCGGCCATGGC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  CCACATCAGCAGTCAACCCTGCACTCTTTCCCAGCGATCTTGGATGTGTCCCCAGGATCCGTCACAGTGTTCCA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  GGCAACCTGGACTTGTCAAAGTCAGCACCTGAAGGAGAGGCCACCTGCCATTCCCCCTGGGAGTTTTCTGTTGT  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CAGCAGGACTTATGGTTCTGGGTCTCAGAGCTTCAGGCCTCACTGTCCTTCTGCCACGGATGCTCAAGGTTCCT  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GGGCAGACCAGCACCTCTGGAGGACAATGGACAAAATGTCTCTTAGACCTGTTCTGGCTGAAGGGCTATCTCTG  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  GCACCTCTGAGATCCCTAGGTCCTGCCCTCCTGGTCCGTGGGCCAGGATGTGCAGAACAACCACTCAGGCCTTT  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  CTGGCCCACCTGGACAGTGCATTTACCTGTGTGCTGCGGGAGGCAGACTGCACAGCTGTCCTAGGGTAACTCAC  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  TCTGCAGCCCTTGAACATGGCACTGCCCTCCTCTGGCACTCATGCTGGGCCTGTGCCCACTGCTGCCTCTCCAT  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  CCCTCTCTCATTGGCCTATACATCTCTTAGGACCTTTGTAATGGTGTCCATGCACCTTTAGAGGACTTCAGAGG  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  CCCTGCCAAGTCTAGCATGTTCCTGTCTCCAACACCGCCTCCTGCACATGCAGAGCAGACAGAAATACCCCACA  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  CATTCCCCAGCCTCTCTGCCCAGTATGCTCATCCACAGGGTTTTCTCACTGCTATGAACCAGCCCCACAGCCCC  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  AGGCCCCTGTCACCTGGCTATGCCCACTCATCCCACCCGTCTCGTGCTGTTGCTTCCCGTAGATGGCGAGCACC  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  TTGCAGGCAGCCTTCTGATCAGTACTGCTCTCCTAGGGCCTGGCACACTGCAGCTGCCCTGTAAATGTTCAGCT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  CAGCGATTGCCAAATACCAGTTAGGGAAGAACACTGGCATCTTTTTCTATTCATTCCCCCTTCAACATATTTTT  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TGTAGTTTTTTATATAAATGACTTTTTTTTTTTTTTGAGATGGAGTTTCACCCTTGTTGCCCAGGCTGGAGTGC  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  AATGGCGTAATCTCGGCTCAGTGCAACCTCTGCCTCCCAGGTTGAAGCGATTCTCCTGCCTCAGCCTCCCAAGT  2442

Query    1  ---------------------------------------------------------ATGGGGTTTCTCCATGT  17
                                                                     |||||||||||||||||
Sbjct 2443  AGCTGGGATTACAGGCATGCACCACCATGCCTGGCTAATTTTGTATTTTTAGTAGAGATGGGGTTTCTCCATGT  2516

Query   18  CGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC-------------------  72
            .||||||||||.|||.|.||||||||.|||||||||.|.|||||||||.||||||                   
Sbjct 2517  TGGTCAGGCTGCTCTCGGACTCCTGATCTCAGGTGACCTGCCCACCTCGGCCTCCCGAAGTGCTGGGATTACAA  2590

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2591  GGGTGAGCCACCATGCCCGGCCATAAATGATTTTATTCATTTTTATGTTTTCTTTTGGGCGGCGGGATGGAGTC  2664

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2665  TCTGTCACCCAGGCTGGCGTGCAATGGCACGATCTTGGCTCACTGCAAGCTTCCCCTTCCGGGTTCATGCCATT  2738

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2739  CTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACGTGTGACCATGCCGGGCTAATTTTTTATATTTTT  2812

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2813  AGTAGAGAGAGGTTTCACCGTGTTAGCCAGGATGGTCTCGATGATCTGACCTCGTGATCTGCCCGCCTCGGCCT  2886

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2887  CCCAAAGTGCTGGGATTACAGGCCTGAGCCACCGCGTCCGGCCTCCATAAATGACTTTTAAAGGGGTTGTATGT  2960

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 2961  TTAGTGTGAACAAAGACAGTACAAAGCATATAAAATACAAGGTGAAAGCCCCCCCCCCGCCACATTAGCTGCGC  3034

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3035  CCCTGAAGTGTCTCCAGCAGAAGAGATGGATGAATGGAAGGACACACAGATGGACAGAGAGCAGGAAAGACTGT  3108

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3109  TAGCTCTGCTAACAGTCAGGACTATTCCTTCTGGACTCTGTGCCTTTGCCTGCACAGCTAGTGTTGATGGCTTG  3182

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3183  TTTGTTGTTTTCACCAGAGTGAGCTCCTTCTGGACATACTGCCTGGCAGCCTGCCTTCCTAGGGAGCTGGCGCC  3256

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3257  AAGGCCTCTCCCTGATGGCACACAAGGAGCCTCCTTCCTGTAGCAGCGCCCAGTTTTCATGTGGATGGATTGTA  3330

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3331  GTTCATTTGACCCTCCCCATCCGCGGGCCATCCGGCTTGTGTCCAGCTTTTAGCTCTTGCCAATGGTGCTGCAG  3404

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3405  TGGCCATTCTTGTAGTTATAGCTTTGCGTACTCAGGAAGGCCCTTCTCCCGACTGCGGCCCCCAGCCTGGTCCA  3478

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3479  CTAAATGCAGCCTGTGGTCGGGCAGACAGCATTGGGGTCCATTAGGAAGACCAGGTTTGCTGGGCATAAGCTTC  3552

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3553  ACAGGACGGGAGAACCTGCCCATGGTGGACTGTCGTTCTCCACAGCTCCCTTCCCTTGCCCCTTCGGGCCTCCA  3626

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3627  GGATATGTTTGCGGGGGTGGGTGTGGTGTCCAGCTGTTACCAGCTTCTGAGCTAGAGCTGTACTGCCTCACGTA  3700

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3701  CACCCCCACCTCTGTAAATGGTCCTTGATTAAATCGTCCTCATATTACCTCCTGCAATGTGCCAGCTGATTCCC  3774

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3775  ACACACCCTGACTGACATAGTTGTGGCCTCTCGAACTTTGATATTTGGCCTGGGAGGACAGAAGAGTAAGGTCG  3848

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3849  CCACGGAAACGCAAGGGGCTCAGTTGTCCCCCCACCCCAAGTTGATGCAGCATCTTCTCGGTCAGAATTGCTTC  3922

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3923  AGGGTGGTTTGCGCACCCTCACTTTGATGATTTAATGAAGACATTTCCTTCTTTCCCAGCATCGGGCAGTAAGT  3996

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 3997  TTCCTGGGCAGAGGCACTTTCTGTTGGTCTGGTCTTGTGGGCCCAGGCAAGCAGCCCCCTGCAGCCAAGGTGCG  4070

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4071  GCAATGACCACAGTGACCGCGTCCAAGTGCTGCCGAAACGCCTTTTTCCTCTTCCCTGTTTCCCTGGACCCTTT  4144

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4145  CCTGCTCTCTGTCCATCTGTGTGTCCTTCCGTTCACCTGTCTCTTCTGCTGGAGACACGTACCTGAAGCAGGTC  4218

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4219  CTCTCCTGTCACTTCCTGGCTCCCCAGGGCTAGGTCCCAGGGTGCTCTCGCTCTGGCTTTCGAGGCTCCTCACC  4292

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4293  ACCCAGCCCACCCCACCCCCACAGGCCCCTGTGCTCCAGTTTCATCCCTGGTCACAATGCAGTCTGCAGATGCC  4366

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4367  AGACCCCTCTTCTGTGCCCAACGGCTGGGACACCCCTACTCCCAGAGAGGCCTCTGTGGACACCCCCACAGCTC  4440

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4441  TCGCAGCACTTGATACCTTGAGTGTGATTGGTCACATCTGGGCTTTCTCCCCCACCCATCTGTGGAACCCCAAG  4514

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4515  AGCCAGGACAGTGACCTCATCACCTCTACTGTCTCCCCTAGCACCTCTGGGAGGAAGGGCCCACAGTAGGTGCT  4588

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4589  CAATAGATGTGTAAAGAAGGCAGGGAAGCAAGAAGGTTGCTCAAACAAGACCATGTTCCCAGCAGACAGATTGC  4662

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4663  ACTCTGACCCAGATGCCACCACACGAAACTTACACCTGCCTGGGGAACAATCCTGTGCTTGGCTCTCCTTGGTG  4736

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4737  GCCAGGGACAGTTGTGCCTCATCCCTCACTTGCAAACCCCAGTCCTGTCTGACCCAGAGACCCTCACAGGGCAT  4810

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4811  CAGCCAGTGAAGGCGGTTTGGGGCTGGAGGATATGTTCTGATCTTGGGAAGAGCTTGGTAGGAGCCAGCCACAG  4884

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4885  AAAGTTTCAGGGCAGAACTGAACAGGTCTCGGGAAGGACACTTCATGCCAGCTAGAGAGGCTCTGGGCACAGGA  4958

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 4959  AAGAATTGGACTTCGGGCAGAAAAATGTTTGTGCTATTTAGTACTATGTAACAAATCACTCCAAAACTTCATTG  5032

Query   73  --------------------  72
                                
Sbjct 5033  CTTAAAGCAACAAGCATGTA  5052

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