Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- XR_001755386.1
- Aligned Length:
- 5072
- Identities:
- 64
- Gaps:
- 5000
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTCTCCAGGGTGTCCAGGAGTCTCTCTGCTGCCAGCCCCGCCCAGACTCCAGGCAGGTTCTCGTTGCTATGGTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATCGCCGGTGCAAGCTGGATGCTTGGACGCGCCGCTGCCAGTCCAACGCAGACCCCGCCCACGACGTCGACGAT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCGTGTAGCCCGCAGGTCCCGCGTGGCTCTCGTTGCCATGGTGATCGCCGCCGCTGGCTCAGGCGGACCAGGCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCGCGGAGCCCCAGCTTTCACAGCCATCGCTGACTGGGAGCAGGAGACCCCTCCCCACTCTACTTCCACTGCCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GAGCTGTGCCATGCCTCACAGCCCAGTAAGGACTGTGGAAGAATGAGGTCCTCCCTGACACCTTTGGGGCCCCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGTGAGCCGCGACCGTGTCATCGCCAGCTTCCCTAAGTGGTACACGCCGGAAGCCTGTTTGCAGCTCAGGGAGC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACTTCCACGGGCAGGTCAGCGCTGCCTGCCAACGCAGGAACACGGGGACTGTCGGGCTCAAACTCTCCAAGGTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTGGTGGTTGGCGATCTCTACGTGGGGAAGACCAGCCTCATCCACAGGTTTTGCAAGAATGTTTTTGATCGAGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTACAAGGCCACCATTGGGGTGGACTTTGAAATTGAGCGCTTTGAGATTGCTGGGATTCCCTATAGCCTCCAGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TTGATCATCACGGCCTTTGACCTCACTGACGTGCAGACCCTGGAGCATACCAGGCAGTGGTTGGAGGATGCTCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GAGGGAGAACGAGGCAGGCTCCTGCTTCATCTTCCTCGTGGGAACCAAGAAGGACCTTCTGGCGAGAACGTGAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGCATTCTTCAGCCGCGTAGCCGCCCTGGCATTCGAGCAGTCGGTGCTGCAGGACCTGGAGAGGCAGAGCAGTG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 CCCGGCTCCAGGTCGGCAATGGAGACCTAATCCAAATGGAAGGGAGTCCGCCCGAGACCCAGGAGAGCAAGAGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCCTCCAGCCTGGGCTGCTGCTAACTGGGGCCTGCGTGGAAGGCCTCCGCTCCCTGCACACACACGGACAGGAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TTTCCGTGACTGTGGTGTGGAGACTGGAGCCCAAGCTCTGCAGCGTGTCGCCCTCAAGCTGTAGGCCCATGTTC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAGTCCCTCCACCCACCCACCGGGCTCAGCTCCAGGGCACAGTCACTTGTCCGTTGCAGGTTGGGCACTAGAAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AGGCCCCCACTGGCTGCCTGGGAGCCCCACACCACCGGGCCAGTGCAGGCACTGTGGTGATCCCATAAAAGGCC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGTCCATTTGCAGGGTCATCAGACAGTCACCTTTGGCCTCAAGAGGCCTCAGAACTGCAAACTCCTGCGTCGGT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTATACTACTCGGCCATGGCCCACATCAGCAGTCAACCCTGCACTCTTTCCCAGCGATCTTGGATGTGTCCCCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GGATCCGTCACAGTGTTCCAGGCAACCTGGACTTGTCAAAGTCAGCACCTGAAGGAGAGGCCACCTGCCATTCC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCCTGGGAGTTTTCTGTTGTCAGCAGGACTTATGGTTCTGGGTCTCAGAGCTTCAGGCCTCACTGTCCTTCTGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CACGGATGCTCAAGGTTCCTGGGCAGACCAGCACCTCTGGAGGACAATGGACAAAATGTCTCTTAGACCTGTTC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGGCTGAAGGGCTATCTCTGGCACCTCTGAGATCCCTAGGTCCTGCCCTCCTGGTCCGTGGGCCAGGATGTGCA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GAACAACCACTCAGGCCTTTCTGGCCCACCTGGACAGTGCATTTACCTGTGTGCTGCGGGAGGCAGACTGCACA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GCTGTCCTAGGGTAACTCACTCTGCAGCCCTTGAACATGGCACTGCCCTCCTCTGGCACTCATGCTGGGCCTGT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GCCCACTGCTGCCTCTCCATCCCTCTCTCATTGGCCTATACATCTCTTAGGACCTTTGTAATGGTGTCCATGCA 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CCTTTAGAGGACTTCAGAGGCCCTGCCAAGTCTAGCATGTTCCTGTCTCCAACACCGCCTCCTGCACATGCAGA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GCAGACAGAAATACCCCACACATTCCCCAGCCTCTCTGCCCAGTATGCTCATCCACAGGGTTTTCTCACTGCTA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 TGAACCAGCCCCACAGCCCCAGGCCCCTGTCACCTGGCTATGCCCACTCATCCCACCCGTCTCGTGCTGTTGCT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TCCCGTAGATGGCGAGCACCTTGCAGGCAGCCTTCTGATCAGTACTGCTCTCCTAGGGCCTGGCACACTGCAGC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGCCCTGTAAATGTTCAGCTCAGCGATTGCCAAATACCAGTTAGGGAAGAACACTGGCATCTTTTTCTATTCAT 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 TCCCCCTTCAACATATTTTTTGTAGTTTTTTATATAAATGACTTTTTTTTTTTTTTGAGATGGAGTTTCACCCT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGTTGCCCAGGCTGGAGTGCAATGGCGTAATCTCGGCTCAGTGCAACCTCTGCCTCCCAGGTTGAAGCGATTCT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CCTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCACCACCATGCCTGGCTAATTTTGTATTTTTAGTA 2516
Query 1 ---ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTC 71
|||||||||||||||||.||||||||||.|||.|.||||||||.|||||||||.|.|||||||||.|||||
Sbjct 2517 GAGATGGGGTTTCTCCATGTTGGTCAGGCTGCTCTCGGACTCCTGATCTCAGGTGACCTGCCCACCTCGGCCTC 2590
Query 72 C------------------------------------------------------------------------- 72
|
Sbjct 2591 CCGAAGTGCTGGGATTACAAGGGTGAGCCACCATGCCCGGCCATAAATGATTTTATTCATTTTTATGTTTTCTT 2664
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2665 TTGGGCGGCGGGATGGAGTCTCTGTCACCCAGGCTGGCGTGCAATGGCACGATCTTGGCTCACTGCAAGCTTCC 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 CCTTCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCACGTGTGACCATGCCG 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 GGCTAATTTTTTATATTTTTAGTAGAGAGAGGTTTCACCGTGTTAGCCAGGATGGTCTCGATGATCTGACCTCG 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 TGATCTGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCCTGAGCCACCGCGTCCGGCCTCCATAAATGA 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 CTTTTAAAGGGGTTGTATGTTTAGTGTGAACAAAGACAGTACAAAGCATATAAAATACAAGGTGAAAGCCCCCC 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 CCCCGCCACATTAGCTGCGCCCCTGAAGTGTCTCCAGCAGAAGAGATGGATGAATGGAAGGACACACAGATGGA 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 CAGAGAGCAGGAAAGACTGTTAGCTCTGCTAACAGTCAGGACTATTCCTTCTGGACTCTGTGCCTTTGCCTGCA 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 CAGCTAGTGTTGATGGCTTGTTTGTTGTTTTCACCAGAGTGAGCTCCTTCTGGACATACTGCCTGGCAGCCTGC 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 CTTCCTAGGGAGCTGGCGCCAAGGCCTCTCCCTGATGGCACACAAGGAGCCTCCTTCCTGTAGCAGCGCCCAGT 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 TTTCATGTGGATGGATTGTAGTTCATTTGACCCTCCCCATCCGCGGGCCATCCGGCTTGTGTCCAGCTTTTAGC 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 TCTTGCCAATGGTGCTGCAGTGGCCATTCTTGTAGTTATAGCTTTGCGTACTCAGGAAGGCCCTTCTCCCGACT 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 GCGGCCCCCAGCCTGGTCCACTAAATGCAGCCTGTGGTCGGGCAGACAGCATTGGGGTCCATTAGGAAGACCAG 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 GTTTGCTGGGCATAAGCTTCACAGGACGGGAGAACCTGCCCATGGTGGACTGTCGTTCTCCACAGCTCCCTTCC 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 CTTGCCCCTTCGGGCCTCCAGGATATGTTTGCGGGGGTGGGTGTGGTGTCCAGCTGTTACCAGCTTCTGAGCTA 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 GAGCTGTACTGCCTCACGTACACCCCCACCTCTGTAAATGGTCCTTGATTAAATCGTCCTCATATTACCTCCTG 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 CAATGTGCCAGCTGATTCCCACACACCCTGACTGACATAGTTGTGGCCTCTCGAACTTTGATATTTGGCCTGGG 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 AGGACAGAAGAGTAAGGTCGCCACGGAAACGCAAGGGGCTCAGTTGTCCCCCCACCCCAAGTTGATGCAGCATC 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 TTCTCGGTCAGAATTGCTTCAGGGTGGTTTGCGCACCCTCACTTTGATGATTTAATGAAGACATTTCCTTCTTT 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 CCCAGCATCGGGCAGTAAGTTTCCTGGGCAGAGGCACTTTCTGTTGGTCTGGTCTTGTGGGCCCAGGCAAGCAG 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 CCCCCTGCAGCCAAGGTGCGGCAATGACCACAGTGACCGCGTCCAAGTGCTGCCGAAACGCCTTTTTCCTCTTC 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 CCTGTTTCCCTGGACCCTTTCCTGCTCTCTGTCCATCTGTGTGTCCTTCCGTTCACCTGTCTCTTCTGCTGGAG 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 ACACGTACCTGAAGCAGGTCCTCTCCTGTCACTTCCTGGCTCCCCAGGGCTAGGTCCCAGGGTGCTCTCGCTCT 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 GGCTTTCGAGGCTCCTCACCACCCAGCCCACCCCACCCCCACAGGCCCCTGTGCTCCAGTTTCATCCCTGGTCA 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 CAATGCAGTCTGCAGATGCCAGACCCCTCTTCTGTGCCCAACGGCTGGGACACCCCTACTCCCAGAGAGGCCTC 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 TGTGGACACCCCCACAGCTCTCGCAGCACTTGATACCTTGAGTGTGATTGGTCACATCTGGGCTTTCTCCCCCA 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 CCCATCTGTGGAACCCCAAGAGCCAGGACAGTGACCTCATCACCTCTACTGTCTCCCCTAGCACCTCTGGGAGG 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 AAGGGCCCACAGTAGGTGCTCAATAGATGTGTAAAGAAGGCAGGGAAGCAAGAAGGTTGCTCAAACAAGACCAT 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 GTTCCCAGCAGACAGATTGCACTCTGACCCAGATGCCACCACACGAAACTTACACCTGCCTGGGGAACAATCCT 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 GTGCTTGGCTCTCCTTGGTGGCCAGGGACAGTTGTGCCTCATCCCTCACTTGCAAACCCCAGTCCTGTCTGACC 4810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4811 CAGAGACCCTCACAGGGCATCAGCCAGTGAAGGCGGTTTGGGGCTGGAGGATATGTTCTGATCTTGGGAAGAGC 4884
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4885 TTGGTAGGAGCCAGCCACAGAAAGTTTCAGGGCAGAACTGAACAGGTCTCGGGAAGGACACTTCATGCCAGCTA 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 GAGAGGCTCTGGGCACAGGAAAGAATTGGACTTCGGGCAGAAAAATGTTTGTGCTATTTAGTACTATGTAACAA 5032
Query 73 ---------------------------------------- 72
Sbjct 5033 ATCACTCCAAAACTTCATTGCTTAAAGCAACAAGCATGTA 5072
