Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- XR_002957375.1
- Aligned Length:
- 4643
- Identities:
- 65
- Gaps:
- 4571
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GAAGTTGTAGGCGGGGCGCGAGGTTCTAGTACCCGAGCTCATACTAGGGACGGGAAGTCGCGACCAGAGCCATT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GGAGGGCGCGGGGACTGCAACCCTAATCAGAGCCCAAATGGCGCAGTGGGAAATGCTGCAGAATCTTGACAGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCTTTCAGGATCAGCTGCACCAGCTTTACTCGCACAGCCTCCTGCCTGTGGACATTCGACAGTACTTGGCTGTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGGATTGAAGACCAGAACTGGCAGGAAGCTGCACTTGGGAGTGATGATTCCAAGGCTACCATGCTATTCTTCCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTTCTTGGATCAGCTGAACTATGAGTGTGGCCGTTGCAGCCAGGACCCAGAGTCCTTGTTGCTGCAGCACAATT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TGCGGAAATTCTGCCGGGACATTCAGCCCTTTTCCCAGGATCCTACCCAGTTGGCTGAGATGATCTTTAACCTC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTTCTGGAAGAAAAAAGAATTTTGATCCAGGCTCAGAGGGCCCAATTGGAACAAGGAGAGCCAGTTCTCGAAAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACCTGTGGAGAGCCAGCAACATGAGATTGAATCCCGGATCCTGGATTTAAGGGCTATGATGGAGAAGCTGGTAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AATCCATCAGCCAACTGAAAGACCAGCAGGATGTCTTCTGCTTCCGATATAAGATCCAGGCCAAAGGGAAGACA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCCTCTCTGGACCCCCATCAGACCAAAGAGCAGAAGATTCTGCAGGAAACTCTCAATGAACTGGACAAAAGGAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AAAGGAGGTGCTGGATGCCTCCAAAGCACTGCTAGGCCGATTAACTACCCTAATCGAGCTACTGCTGCCAAAGT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGGAGGAGTGGAAGGCCCAGCAGCAAAAAGCCTGCATCAGAGCTCCCATTGACCACGGGTTGGAACAGCTGGAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACATGGTTCACAGCTGGAGCAAAGCTGTTGTTTCACCTGAGGCAGCTGCTGAAGGAGCTGAAGGGACTGAGTTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCTGGTTAGCTATCAGGATGACCCTCTGACCAAAGGGGTGGACCTACGCAACGCCCAGGTCACAGAGTTGCTAC 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGCGTCTGCTCCACAGAGCCTTTGTGGTAGAAACCCAGCCCTGCATGCCCCAAACTCCCCATCGACCCCTCATC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTCAAGACTGGCAGCAAGTTCACCGTCCGAACAAGGCTGCTGGTGAGACTCCAGGAAGGCAATGAGTCACTGAC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGTGGAAGTCTCCATTGACAGGAATCCTCCTCAATTACAAGGCTTCCGGAAGTTCAACATTCTGACTTCAAACC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGAAAACTTTGACCCCCGAGAAGGGGCAGAGTCAGGGTTTGATTTGGGACTTTGGTTACCTGACTCTGGTGGAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CAACGTTCAGGTGGTTCAGGAAAGGGCAGCAATAAGGGGCCACTAGGTGTGACAGAGGAACTGCACATCATCAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CTTCACGGTCAAATATACCTACCAGGGTCTGAAGCAGGAGCTGAAAGTGAGTGAAAATGGAGGGCAAGGAGAGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GAAAGCAGCTTTGGAAGAAGGCATAAGAAGGGGATAAACAGAAGCCTCTTGGGACGGACACCCTCCCTGTGGTG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ATTATTTCCAACATGAACCAGCTCTCAATTGCCTGGGCTTCAGTTCTCTGGTTCAATTTGCTCAGCCCAAACCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TCAGGTAGGGGAGTGGGGCCGACAGGTCAAGGCGCGAGAGGAGGGGTGTGGAAGCTTGGTGTGATAGGTTGCTT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CTGAGCCAGCCTACACTGCTCCCACCCCTGCAGAACCAGCAGTTCTTCTCCAACCCCCCCAAGGCCCCCTGGAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 CTTGCTGGGCCCTGCTCTCAGTTGGCAGTTCTCCTCCTATGTTGGCCGAGGCCTCAACTCAGACCAGCTGAGCA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGCTGAGAAACAAGCTGTTCGGGCAGAACTGTAGGACTGAGGATCCATTATTGTCCTGGGCTGACTTCACTAAG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CGAGAGAGCCCTCCTGGCAAGTTACCATTCTGGACATGGCTGGACAAAATTCTGGAGTTGGTACATGACCACCT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GAAGGATCTCTGGAATGATGGACGCATCATGGGCTTTGTGAGTCGGAGCCAGGAGCGCCGGCTGCTGAAGAAGA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CCATGTCTGGCACCTTTCTACTGCGCTTCAGTGAATCGTCAGAAGGGGGCATTACCTGCTCCTGGGTGGAGCAC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CAGGATGATGACAAGGTGCTCATCTACTCTGTGCAACCGTACACGAAGGAGGTGCTGCAGTCACTCCCGCTGAC 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 TGAAATCATCCGCCATTACCAGTTGCTCACTGAGGAGAATATACCTGAAAACCCACTGCGCTTCCTCTATCCCC 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GAATCCCCCGGGATGAAGCTTTTGGGTGCTACTACCAGGAGAAAGTTAATCTCCAGGAACGGAGGAAATACCTG 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AAACACAGGCTCATTGTGGTCTCTAATAGACAGGTGGATGAACTGCAACAACCGCTGGAGCTTAAGCCAGAGCC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 AGAGCTGGAGTCATTAGAGCTGGAACTAGGGCTGGTGCCAGAGCCAGAGCTCAGCCTGGACTTAGAGCCACTGC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TGAAGGCAGGGCTGGATCTGGGGCCAGAGCTAGAGTCTGTGCTGGAGTCCACTCTGGAGCCTGTGATAGAGCCC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ACACTATGCATGGTATCACAAACAGTGCCAGAGCCAGACCAAGGACCTGTATCACAGCCAGTGCCAGAGCCAGA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 TTTGCCCTGTGATCTGAGACATTTGAACACTGAGCCAATGGAAATCTTCAGAAACTGTGTAAAGATTGAAGAAA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 TCATGCCGAATGGTGACCCACTGTTGGCTGGCCAGAACACCGTGGATGAGGTTTACGTCTCCCGCCCCAGCCAC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TTCTACACTGATGGACCCTTGATGCCTTCTGACTTCTAGGAACCACATTTCCTCTGTTCTTTTCATATCTCTTG 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 CCCTTCCTACTCCTCATAGCATGATATTGTTCTCCAAGGATGGGAATCAGGCATGTGTCCCTTCCAAGCTGTGT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 TAACTGTTCAAACTCAGGCCTGTGTGACTCCATTGGGGTGAGAGGTGAAAGCATAACATGGGTACAGAGGGGAC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 AACAATGAATCAGAACAGATGCTGAGCCATAGGTCTAAATAGGATCCTGGAGGCTGCCTGCTGTGCTGGGAGGT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 ATAGGGGTCCTGGGGGCAGGCCAGGGCAGTTGACAGGTACTTGGAGGGCTCAGGGCAGTGGCTTCTTTCCAGTA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 TGGAAGGATTTCAACATTTTAATAGTTGGTTAGGCTAAACTGGTGCATACTGGCATTGGCCCTTGGTGGGGAGC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 ACAGACACAGGATAGGACTCCATTTCTTTCTTCCATTCCTTCATGTCTAGGATAACTTGCTTTCTTCTTTCCTT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TACTCCTGGCTCAAGCCCTGAATTTCTTCTTTTCCTGCAGGGGTTGAGAGCTTTCTGCCTTAGCCTACCATGTG 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 AAACTCTACCCTGAAGAAAGGGATGGATAGGAAGTAGACCTCTTTTTCTTACCAGTCTCCTCCCCTACTCTGCC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 CCTAAGCTGGCTGTACCTGTTCCTCCCCCATAAAATGATCCTGCCAATCTAATGTGAGTGTGAAGCTTTGCACA 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CTAGTTTATGCTACCTAGTCTCCACTTTCTCAATGCTTAGGAGACAGATCACTCCTGGAGGCTGGGGATGGTAG 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 GATTGCTGGGGATTTTTTTTTTTTTAAACAGGGTCTCACTCTGTTGCCCAGGCTAGAGTGCAATGGTGCAATCA 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 CAGCTCACTGCAGCCTCAACCTCCTGGGTTCAAGCAATCCTCCTACCTCAGCCTCCTGGGTAGCTAGCACCATG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 GCATGCGCCACCATGCCCTATTTTTTTTTTTTAAAGACAGGGTCTTGCTATATTGCCCAGGCTGGTCTTGAACT 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 GGGCTCAAGTGATCCTCACGCCTTGGCCTCCCAAAGTGCTGGGATTATAGGCATGAGCCACTGTGCTTGGCCAG 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 GATTTTTTTTTTTTTTTTTTTGAGATGGAGTTTCTCTCTTGTTGTCCAGGCTGGAGTGCAATGGTGTGATCTCG 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 GCTCACTGCAACCTCCGCCTTCCGGGTTCAAGTGACTCTCCTGCCTCAGCCTCCCCAGTAGCTGGGATTACAGA 4070
Query 1 ------------------------------------------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCT 32
|.|||||||||||||||.||||||||||||||
Sbjct 4071 TCTGCACCACCATGCCCAGCTAATTTTGTATTTTTAGTAGAGACGGGGTTTCTCCATGTTGGTCAGGCTGGTCT 4144
Query 33 GGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC---------------------------------- 72
.|||||||||||||||.||||||.|.|||||||.||||||
Sbjct 4145 CGAACTCCTGACCTCAAGTGATCTGTCCACCTCGGCCTCCCAGAGTGCTGGGATTACAGGCGTGAGCCACTGTT 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 CCCAGCAGGAATTTCTTTTTTATAGTATTGGATAAAGTTTGGTGTTTTTACAGAGGAGAAGCAATGGGTCTTAG 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 CTCTTTCTCTATTATGTTATCATCCTCCCTTTTTTGTACAATATGTTGTTTACCTGAAAGGAAGGTTTCTATTC 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 GTTGGTTGTGGACCTGGACAAAGTCCAAGTCTGTGGAACTTAAAACCTTGAAGGTCTGTCATAGGACTCTGGAC 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 AATCTCACACCTTAGCTATTCCCAGGGAACCCCAGGGGGCAACTGACATTGCTCCAAGATGTTCTCCTGATGTA 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 GCTTGAGATATAAAGGAAAGGCCCTGCACAGGTGGCTGTTTCTTGTCTGTTATGTCAGAGGAACAGTCCTGTTC 4588
Query 73 ------------------------------------------------------- 72
Sbjct 4589 AGAAAGGGGCTCTTCTGAGCAGAAATGGCTAATAAACTTTGTGCTGATCTGGAAA 4643
