Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- XR_427108.4
- Aligned Length:
- 4838
- Identities:
- 63
- Gaps:
- 4766
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGCATGTCCCTTCTGCAGTGCCTTCCTCTGTGGCCCTCAAAGGGAAACTGAAGCCTTTGAGGACATGAAGACT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCATTAGGCCAACGAGGGGTCTTGGAACTCCAGATCAAAGAGAATAAGAAAGACCTGACTCTGTGTGTGTGTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGTGTGTGTGTACGTGTGTGTGTGTGTGTGTGGCAGAGGGGGGTGTGGTCATGGGGTATTGACATGAATACGCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGGGGCAGGAAGCATCTGAAATCAGAGCTAACTTGGGAGGCACAGAACACGGGGTGCCTGGAAGGGGAACAGAT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTGTTGTGGGGCACAGGGCAGGCTGGGAGGGGAACAAAGGTCCACTCCATGGGTAACCAGACCCTTCCGCCAGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GCTGGCCACTTCTGCCTTTGGAAAATGTTTCACAACGCCCCATGTTGTGTGTGTGTGTGAATCGGCCGATGTGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 ACCGAATGTTGATGTAAGAGGCAGGGCACTCGGCTGCGGATGGGTAACAGGGCGTGGGCTGGCACACTTACTTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CACCAGTGCCCAGAGAGGGGGTGCAGGCTGAGGAGCTGCCCAGAGCACCGCTCACACTCCCAGAGTACCTGAAG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCGGCATTTCAATGACAGGGCACCTTCAGCCTGCGGAAGCTATGGGCCTTCACGGGGCCTGGCTTCCTCATGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CATTGCTTTCCTGGACCCAGGAAACATCGAGTCAGATCTTCAGGCTGGCGCCGTGGCGGGATTCAAACTTCTCT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGGTGCTGCTCTGGGCCACCGTGTTGGGCTTGCTCTGCCAGCGACTGGCTGCACGTCTGGGCGTGGTGACAGGC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAGGACTTGGGCGAGGTCTGCCATCTCTACTACCCTAAGGTGCCCCGCACCGTCCTCTGGCTGACCATCGAGCT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGCCATTGTGGGCTCCGACATGCAGGAAGTCATCGGCACGGCCATTGCATTCAATCTGCTCTCAGCTGGACGAA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TCCCACTCTGGGGTGGCGTCCTCATCACCATCGTGGACACCTTCTTCTTCCTCTTCCTCGATAACTACGGGCTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CGGAAGCTGGAAGCTTTTTTTGGACTCCTTATAACCATTATGGCCTTGACCTTTGGCTATGAGTATGTGGTGGC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GCGTCCTGAGCAGGGAGCGCTTCTTCGGGGCCTGTTCCTGCCCTCGTGCCCGGGCTGCGGCCACCCCGAGCTGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGCAGGCGGTGGGCATTGTTGGCGCCATCATCATGCCCCACAACATCTACCTGCACTCGGCCCTGGTCAAGTCT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CGAGAGATAGACCGGGCCCGCCGAGCAGACATCAGAGAAGCCAACATGTACTTCCTGATTGAGGCCACCATCGC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CCTGTCCGTCTCCTTTATCATCAACCTCTTTGTCATGGCTGTCTTTGGGCAGGCCTTCTACCAGAAAACCAACC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGGCTGCGTTCAACATCTGTGCCAACAGCAGCCTCCACGACTACGCCAAGATCTTCCCCATGAACAACGCCACC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GTGGCCGTGGACATTTACCAGGGGGGCGTGATCCTGGGCTGCCTGTTCGGCCCCGCGGCCCTCTACATCTGGGC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CATAGGTCTCCTGGCGGCTGGGCAGAGCTCCACCATGACGGGCACCTACGCGGGACAGTTCGTGATGGAGGCTG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GAGTGCAATGGCGCGATCTCCGGCTCACCGCAACCTCCACCTCCTGGGTTCAAGCAATTCTCCTGCCTCAGCCT 1702
Query 1 ----------------------------------------------------------ATGGGGTTTCTCCATG 16
|.||||||||||||||
Sbjct 1703 CCTGACCAGCTGGGATTACAGGCCACCACACCCAGCTAATTTTGTATTTTCAGTAAAGACGGGGTTTCTCCATG 1776
Query 17 TCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC------------------ 72
|.|||||||.||||||.|||||||...||||||||||||.||||.|||||||||||
Sbjct 1777 TTGGTCAGGGTGGTCTCGAACTCCCAGCCTCAGGTGATCTGCCCTCCTCAGCCTCCCAAAGTGCTGGGATTACA 1850
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1851 GGCGTGAGCCACCGCGCCCGGCTCTTTCTTTCTTTTTTGAGACAGGATTTCACTCTGTTGCTCAGGCTGGAGTG 1924
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1925 CAATGGCGCCATCACAGCTCGCTGCAGCCTCAACTTCAGCCTCCCGAGTCATTGGGACTACAGGCTCATGCCAC 1998
Query 73 -------------------------------------------------------------------------- 72
Sbjct 1999 CACACCAGGCTAATTTTTAAAATTATTTGTAGAGATGTGGTCTTCCTATGTTTCCCAGGCTGGTCTCGAACTCC 2072
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2073 TGGGCTCAAGTGATCTTCCCGCCTTGGCTTCCCAAAGTGCTGGGATTACAGACGTGAGCCACCCCACTCAGCTT 2146
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2147 TGTTTCCTTCATGTAGCCCAGAGGGCGACACTATAAGCCCCATTTTACAGATGAGAAAACAGATCCTGACAGAT 2220
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2221 GAGGTGACTTGCTGGAAGCTGCAGACCCAGGACTAACAGAAGCCTTTTCCCCAAAACTGTTTAGTCTTCAGCAA 2294
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2295 CCAGCTATGGGATGGGAGCTCCCCATTTCTCCCCACCCATCCCCTCTTGCCACCTAGGGACAGAGCTGTCCCAG 2368
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2369 TTCAACAGTGGAAAAACAGAGCATGCCCCCAGGGATAAATCGGTTGAGGGACTACAGAGGATCTCTCCTCTGGA 2442
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2443 ATCCCCAGTCCTGTCTACTCCTCACCAAGGAGTTCACCCCCACCCCAGGGCTTCCTGAGGCTGCGGTGGTCACG 2516
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2517 CTTCGCCCGTGTCCTCCTCACCCGCTCCTGCGCCATCCTGCCCACCGTGCTCGTGGCTGTCTTCCGGGACCTGA 2590
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2591 GGGACTTGTCGGGCCTCAATGATCTGCTCAACGTGCTGCAGAGCCTGCTGCTCCCGTTCGCCGTGCTGCCCATC 2664
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2665 CTCACGTTCACCAGCATGCCCACCCTCATGCAGGAGTTTGCCAATGGCCTGCTGAACAAGGTCGTCACCTCTTC 2738
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2739 CATCATGGTGCTAGTCTGCGCCATCAACCTCTACTTCGTGGTCAGCTATCTGCCCAGCCTGCCCCACCCTGCCT 2812
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2813 ACTTCGGCCTTGCAGCCTTGCTGGCCGCAGCCTACCTGGGCCTCAGCACCTACCTGGTCTGGACCTGTTGCCTT 2886
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2887 GCCCACGGAGCCACCTTTCTGGCCCACAGCTCCCACCACCACTTCCTGTATGGGCTCCTTGAAGAGGACCAGAA 2960
Query 73 -------------------------------------------------------------------------- 72
Sbjct 2961 AGGGGAGACCTCTGGCTAGGCCCACACCAGGGCCTGGCTGGGAGTGGCATGTATGACGTGACTGGCCTGCTGGA 3034
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3035 TGTGGAGGGGGCGCGTGCAGGCAGCAGGATAGAGTGGGACAGTTCCTGAGACCAGCCAACCTGGGGGCTTTAGG 3108
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3109 GACCTGCTGTTTCCTAGCGCAGCCATGTGATTACCCTCTGGGTCTCAGTGTCCTCATCTGTAAAATGGAGACAC 3182
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3183 CACCACCCTTGCCATGGAGGTTAAGCACTTTAACACAGTGTCTGGCACTTGGGACAAAAACAAACAAACGAAAA 3256
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3257 ACATTTCAAAAGGTATTTATTGAGCACCTGCAGGCGTGACCTGACAGCCCAAGGGTGGGTGGGGTGAGGGCTTG 3330
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3331 AGGACTTGGGCGGGACACAGGCTCCAAACTGGAGCTTGAAATAGTGTCTGATGAATGTTAAATTATCTATCTAT 3404
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3405 CTATTTATTTATTTATTTGAGACAGGGAAAGGGTCTCCCTCTGTTGCCAAGGCTGGAGTGCAGTGGCGCAATCT 3478
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3479 TAACTCATTGCAACCTCCACCTTCTGGGTTCAAGCGATTCTCTTTATTCAGCCCCGGGAGTGGCGCGCGCCACC 3552
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3553 ACGCCCAGCTAATTTGTGTATTTTCAGCAGAGACGGGGTTTGCCATGCTGGCCAGGCTGGTCTCGAACTGCTGG 3626
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3627 ATTCAAGTGATCCGCCCATCTCCGTCTCCCAAAGTGCTGGGAATTACAGGCGTGAGCCACCAAACCCGGCCTGA 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 TTAAAGTTAAATAAATACTAGTTCCCTTCTCGTCCAAAGGAGCAGGGAATGGGAACCGGGAAGGCACGAAGTCT 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 CTAAAGCATCCAGAAGACCCCTACACCAGGGTCTGGTCCGCTCCTATTCGCCGCAGCCTTTCTGTTCCGCCTGC 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 AACCCATTTTCCAGACAGTAAAACGGCGGCGCACTTCTTTCTCCGTCAGGCACCAGGTCATAAGGAACCCAAGA 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 GTCTGTGCCTCTGAGGCCCAAATTATTTGCTGTTTCCTCAGGGGAGCCGGCGGCCGCGACTCCCACGCCGCGCC 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 GTTACCGCTCCCTCTCTGCTGACTGCTCCCCCTAGGGGCAGAGACGGTCCCGACGCCCGCCATCCCGCCCCGGC 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 CTCACCCCTCCCCGCCAGGCGGAACGACGCGGGGAGGCGGGCGCTCGGGGCTCGCGCCAGGGGCCCCAGAATCC 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 TTCGGGGAGAGTGGGTGGGAGGAAGCTGTGTGGGCGGGGAGCCCCCTCTGCCTTAGGGAGCGGCTGGGCACCCA 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 TTCGCCCCATTCAGGGGCTGCACTTTATAGACGTTCCCTAGGCTGTTTCTAGGCTCCCCCAAGTCCCTCCTCCA 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 GCCTCGTCGGGTCCCTCAGACCCCAGCCCAGGACCTGCGGAGGGCCGCAGCGAGGAGAGGCCAACAGGCCTTTC 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 CCTAGAGTTGAACCTGGGCCGGGTGTTGCACCTGGAAGAACCCCCGATTTCCTGGGGACCCAGCAGGGCAGGCG 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 GCCTGGCTCCGCGCTCAGGTCCGGACGCTTGTTTATGAGAAGAATTTCCTCTTTCTTAAAAGGGCAACGATGCG 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 AGTGGGTCCCTCAAGGAGAGAAGAGATGGGACCGGTCTGGTGCGACCTGGGCAAGCGCTGCAGAGGGTACCTGG 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 GCAAGAGGGCCGCCCGCCTCCTCTGGGTTTGGCACTGGAGAAGATGGGTCCATGCCAGCTGAAGGAGGAGATGG 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 ATGGGGGACGTTTAGCGAAGAAAGGCATCTCCCAGATCCTTTAGCCTCCTGGAAGTGCCCCCGTTGTACCCCCT 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 ACACACCCCTCTTGGCATTGAGTGCCAGTCCTCTGCCAGGCTCTGTGTTACAAGTTGGGGAGGGCGGCAAAGTC 4810
Query 73 ---------------------------- 72
Sbjct 4811 CCGAATTAAAGATGTCAGTTCTCAAGGA 4838
