Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- XR_926420.2
- Aligned Length:
- 4692
- Identities:
- 63
- Gaps:
- 4620
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAGAGGTGAATGTGTCATGAGGGCTCTCTGCCCTCATGAGTGGATTAATCCATTCATAGATTAATGGATTAATG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AATTAAAGGGTTGTTTTGGGAGTGGCTGGCTTTATGACAGGAAGAGAGGCCTGTGCCTGCCCAGTGAGCTCTCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCCCACAAGATGCCCTGTGCTGTCATGAGACTCTGCAGTGTCCCTACCAGCAGGAAGGCTCTCCCCAAATGCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCCCTTGACCCTGGACTTCCCAGCCTCCAGAACTTGAGAAGAGGAACAAATGGAGGAACATCCCAGTCAAGTGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CATTCCTAGTGACATTCACCAGAACAGAGTCAAGCTTTGGATCCCATGTTCTGTGACTTCCTCTTCACCACGCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCCTCCACACACGTAGCAGCTCAAGGGTTTCTGATGAGTGGGGTCTATGTTCCCTTTATGAGCTGTAACGCACA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCATGAAGGTCTGCGGCTTGGCTATTGAGTCAGTGAGAGCGTGAACCTACTATTAGAAGAAAAACTCTGAATAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GTCTGAACGTCAGAAAGAACGAAGTTTGGACACATTGTCTTTAAGAACTGTAACACTCACCCCAAGGGTTTATG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GATTCATTCTTGAAATCAGTGAAACCAAAAGCTTTCCAAAGTTTAACACACAGGGAAATGACTTACTGCAAAGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ACCACTCTTCCCCACGAGACTTCGAGAAGACCCGCTGTCACGGACTGAGTTGTGTCCTCTTAAAATTCAGATGT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TGGAGTCCAAACCCCCAGTAACTCAGAGTGTGAACGTATTTGAAGAGGTCTTTAAAGAGGTGATGAAGGTCTTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GTCTCTGACAATTTGCCTCTGTGACGTGGATGGGACTGGAAGTCCATTTGGAGCCCTGTCTTCTCCACCTAGGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AGAGAGACCCCATGAGCTCGTCAAGCTCCTTCTGTGACTGATCAGAGATCCCACCGTGAGTCCAGCTCCTGGTC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCATGCTCTGGATATATCGGTCCCTGGCAGCGTGCAACTCCTTAGCCAAAGACGTGGCAACTGCGGGTGAAGTA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TCTCTGGGCAGGAAATCAATGCAGAAATGCAACTGGGGAGAGGGGGCTTGGGGGCCAGTTCCAGGGAGATTGGA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ACTGCTGTGTTCTCATCAGCAGAAGTGGCCCCTGCCCACCCCCATCCTAATCCCTTCTCATGTGGGAGAAGGTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGTGAGCCCTCTCCCTACCAGGCAGGTTCTATGGCAATGTGGGCACATACCCTGGGGCAGGGGCCGAGGGACTT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AACTCACTTCATGAGCGCCAATGGAGGAGCGAAGGGAATGCCTGATGAAAACAACATTCTACCAGTATGCACTG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TTTTCTAACCTACAGAGTGCCTCTGTGTTCACTGTCCCATTTGAGAATTCTAAGTAGAATTCTGAACAGGCTGG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGCAGATTGCCCACCCCAAGGGACAGATGTTGGCTGGTACTGTTGGTATTCATGGAAGATTCCTTCTGACACTC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 CCTCCTTCTTTGTAATTGCCATGAACTGGAGCACTGGGCCAATATAAATCATCCAAGGGTGAACACGCTGCACA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGGACGGCTCCTCTTTGTTTTTGAAGGGATTCCATCTCTATTTTGCCATGTGCTCCTTCACCCCACTCCCCACC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 CCCGTCTTTCATTTCTTTCTCTGGAAAAGATACTTCAACTCACAGGACTGCGATGTTGAAACGGACACCCAAGA 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GCATCACAGATGGGCCAGGCCTGGACCTCTCGGGACAACATTCCTCACGACTTTTAGATAGAAGAGATTAGAGA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTTGGGACTGGTGGCAACTGGTAACGTTTTCAGTGTTTGGTAAACAGCCAGGGTCCGGAGCTCTGGGAACAGCC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGATTTAGCTCTTTGTTTAAGTTTTGTGTTAGAGGCTCCCAAGAAGCTGATGCAGGGGAAAGAAATTAACAACC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 ATGGCTCATTCACAGCCAGGCAGCCAAATGGACAGCTCTATAAGACTCAAGCCGACAGCGGAGAGAGTGCAACC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 AAACAGCCTTGGCCCAGCTTTCAGAGGAGAACGTTATTCACCCCAACTGCTCTGCATCTGCCTGGATGTCTGCC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 AAGATCTGTGAGCATTACAGCGTTGGTATGCTTTGGGTGAGGCCTGTGGCTATGGCAACAAGTTGGGAGCAACC 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CGGTCCCTGGGAATGAGAACAGTGTCTAAAATCAGGCAGGCGAGGGGCAGGGAGGAGAGGTAAAGGTTGGACTT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GCCTGAAGATGGAGCCGTTTTATTGTTGTGGGTAAAGCTGCTACCATTAGGGGCTGTTTACAGAGTGGGTGCAG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 CTCAAGCTGGGAGCATGTTAGACTCAGCGACTACGATCAACCTATTGACTTGTTCCCATGAGACAGAGTAAATT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 AACTGTTGCAGTACTGGTCATGTACCACCAACCTCCTGTGAACCAGCCCTCAGTGAAACATTTATGTGAAAGGC 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CATGGTGTTCCCATAAGAGGGTGCATGTTCTCTCCCTTGACTAACTCTTCAGTATGCCTCATTCTCACGCGCTG 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GTGTGCAGGAAGGAGTCCAACATGCCCCATTGACAGTCATGCCCTGTATGTGGAAAGTCTTCAGGTAGAGCACT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 GGGCTCAGGTTTGAAGATGTGAGTTCTAATCCTAGCAAGGCCATTACCTCCCAGTGACCTCATGTCTCGATTTC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CTCAACCACAAAACAAAGGCATTGGTGAGCTGACCTCTAAGGCCTCTCCAGTTCTCACCTTCTGTGTCTCTACA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GACTGGAGACTAGAAGATTATGGGCACTTTTATTGAGTCTTCATTTTGTTTCCATTTCTTTGTAGTCATCAGCT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GGAGTTGAGGACAAGTTTTAACAATAGATAGGTTTCTTTTTGTCTCTTTTTAAAAAATTTTATTTAAAATAAAT 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GCCAAGTGTAGTGGCTCATACCTGTAATCCCAGCACTTTGGGGAGGCCAAGGTGGGAGGATTGCTTTTGAGTTT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GAGACCAGCCTGGGCAACGTGGTGAGACCCTGTTTGTACAAAAAATTTTAAATTAGCCAGGCATGGTGGCGTGT 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GCCTATAGTCCTAGCTACTCTGGAGGTAGAGGCAGGAGGATCCCTTGAACCTGGGAGGTTGAGGCCACAGTGAG 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 CTGTGATTGTGCTATTGAACTCTAGCCTGGGCAACAGAGCAAGACCCTGTCTCTTAAAAAAGACTATTTTTTAA 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 GAACACTTTTAGGTTCACAGCGAAATTTGGAGGAAACTTGGCATATGTCATATGCCCCCTGCTCCCATGCATGC 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 ACAGCCTCTACCATTAGCAATGTCCCCACTCAAATGGTACCTTTGTTGTAATCAACAACCCTGTACTGACACAT 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 CATCATCACCCAAACTCCATAGTTCACATTAGGTTTCACTCTTGGTGTGGTGTACATTCCATGGGCTTGAACAA 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 CTGTATAATGACATTATCCACCACTGCAGGATCATACAGAGTAGTCTCACTGCCCTAAAACTACTCTGTGCTCC 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 ACCTGTTTGTCCCTTCTTTCACTCTAAACTCCTGGCAACAACTGACCTTTTTACTGCCTCGATAGCTTTGCCTT 3552
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3553 CTTCGGAATGTCATGTAGTTGAAATCATACATCATGAAGCCTTTTCAGATTGGCTTCATATAGGTTTCCTTCCT 3626
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3627 TCCTTCCTCCCACCACCTTCCTTTCTTTCTGTATTCCTAACTCTTGGATGTATTTTCCCCAGCATCATGACTTG 3700
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3701 ATGGGACTTTTGCTAAGATAGGCAATCATAGAAAGTCATAAATCTCTTGTCAGCCTTATTGGCTCACCTCCGAG 3774
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3775 ATGGTTCCAACACTCTTTAAGGCCCACTTTTCCAATCCACAGATTCCCCAGCAGAAGTCCAAGCTGCTGAGCCT 3848
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3849 CACATCATCTTTTGCACTAGTAATCTTTACCACTACTTCACTGTAGCATTTGAAAATTTTCATATGAAGCCATA 3922
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3923 GTTCTGTGTCTTTTTTTTTTTTTTTTTTTTTTTGGAGACGGAGTCTTAACCTGTTGCCCAGGCTGGAGTGCAGT 3996
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3997 GGCACAGTCTTAGCTCACTGCAAGCTCCGCCTCACGGGTTCAAGTGATTCTTGCCTCAGCCTCCCAAGTAGCTG 4070
Query 1 ------------------------------------------------------ATGGGGTTTCTCCATGTCGG 20
||||||||||.||||||.||
Sbjct 4071 GGATTACAGGCGCGCCACCATGCCCAGCTAAATTTGTTGGCATTTTTAGTAGAGATGGGGTTTCACCATGTTGG 4144
Query 21 TCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC---------------------- 72
.|||||||||||..|||||||.|||||||||||||.|||..|||||||||||
Sbjct 4145 CCAGGCTGGTCTCAAACTCCTTACCTCAGGTGATCTGCCTGCCTCAGCCTCCCAAAGTGCTGGGATTAAAGGTG 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 TGAGCCACCGCACCTGGCCTGAAGCCATAGTTCTTAACCTCAGTTGTGCAATAGAATTATCTGGGGAATTTAAA 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 AATTAGAAAAAACCCATGCCCTGAAGATTGTGATCTAACTGGTCTTGCGTAGCGCCTGGGCATTGGTATTTTTT 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 AAATGTTTCCCAACTGATACTAATGTGGCCATTCTGCAAGCCACAGTTGAAAGGCTTATTCAAGCATCCTGTTG 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 CTGAATGCATGTCGTCCTTACCACATGACTCTGGAGGTTTTCTTGTATTCTGATGTGGCTGCCCTGTTGAGGCC 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 TGCCCCTTAGAGTGGAGATTATCCCCTGCAGTAGGCTGCCTGGAATATGATCCCCAGTGATCCCTGCTTCCTGG 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 TATTCAGGCCCTGGTGTGATCCCTTTCCCTTGAAGCCTGGGCTGGATTAGTGACTTGCTTCTAACCAACAGCAT 4662
Query 73 ------------------------------ 72
Sbjct 4663 ATGGCAAAAATAAATGTTTATTGTTTTAAA 4692
