Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10261
Subject:
XR_926425.3
Aligned Length:
5462
Identities:
63
Gaps:
5390

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACTGGGCGACAGAGTGAGACTCCATTAAAAAAAAAAGCCTTCAGGCTCATCACCTTGGTGAGGCAACCACCAAT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TTAAGTGACCTTCCAGAGCCCCCAGGCATCCCCCTACACAAATACTTTTTTCTAAGAGTGACTAAAATTGGTGT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TTCCTAACCTACATAAAAAATCACTTAGGTGAGCAGTATAAAATACCACTCACTTTTCCTCCCCTATAAGATTA  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  CAGATATATCTAAAGTCTTCAGGTCTGTATATAGTAGTGACTTAGCTACATCACTGGTTAAAGTAAATGTGCCA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GGACTGACTTCCCAGGTCTCTCATAGGCACGCCCTTCAAACCCACATTGAACCTGAAATCCCAGTGTTCCAGGT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TCAGTTGGTTTCCAATGGCACCCAGGTGTCAGGTTGACCCGATAGGATGCCTTAGGTATCGGGGCCGTGGGGGG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  ATGGGAGGATGCAGGTGCCACCTTAAAGCATCACACCATCCCACCAGGCTGTTCCAGAAAACACAAAACTTTTT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CAGACTCTGTCTCCAGAAAGGGACTTAGTCTCCAAAGAGGTTGGTTTTATCTAGATGAGTTGATAGAGAATGTC  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  TGCTGGAATTGGGCTCTGATTCAGTCAGCGTTTGCTATTTAAATCAGTCTTAGATAACTTCCCTATCAATTGCA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  TTCTCTCTTGCATGAAAATTACTTCCTGACTGCCTCCTCCTAGCTCAGTACTGTTCTATTGCTTAGGACAGGAG  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TGGGCAGTGCCCTCGTAGATGTTCATGCGTGTACTGATAAAAATTACCTATAACTCTTAGTGTGATCTAACACT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  TCAAGCAGTATCTGAGAGAAGGGGTATCGGATATAAAACAAATCATGGCCTGCCAGAGAAGAGTCCTTCAGTGA  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GCTCTTGAGAGTTGAAGCCAAAGAGGCCAGATGCTGAAGAACTTGGATGCTGTCTTAATGAGTTTCACAGTTAG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CCTGTAGGTGATGGAGAGTCATAAAAGAATTTTAAGTAGGGGAATGACATAATCACACTTGCATTTTAAAAATA  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CAGCTTTGGCTGTGATAAGTGGGGAACGGGATAAGGGTTTAACTTATCATGCACACTAAATTACTTCAAAACAT  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  AATGCCTTCAAACAACAGCACATTTGGTTGTGTGTGTGGCAGGGTGGAGATCAGGATTTCTGGAGCTGCTTAGC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  TGAGAGGTTTTGGTTAAGGGTCTCCCAGGAGGTTGCCATGAAGGTGCAGGCTGGGGTCACAGGCACTGGAAGGC  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  ATGGCTGGAGCAAGCAGACCATTTCCAAGTGGCTCACTCTCATAGCTGCCAAGTTGGTGATTGCTGTTTGTAGA  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TACATCCAGTTCCTTCCACATCAACCCTGCCATAGGCTGCTTGAGTAGTCTCATGACATGGCAGCTGGCTCACC  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  CCAGAATAAGGAAATGACTTACTGCAAAGAACCACTCTTCCCCACGAGACTTCGAGAAGACCCGCTGTCACGGA  1480

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1481  CTGAGTTGTGTCCTCTTAAAATTCAGATGTTGGAGTCCAAACCCCCAGTAACTCAGAGTGTGAACGTATTTGAA  1554

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1555  GAGGTCTTTAAAGAGGTGATGAAGGTCTTTGTCTCTGACAATTTGCCTCTGTGACGTGGATGGGACTGGAAGTC  1628

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1629  CATTTGGAGCCCTGTCTTCTCCACCTAGGGAGAGAGACCCCATGAGCTCGTCAAGCTCCTTCTGTGACTGATCA  1702

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1703  GAGATCCCACCGTGAGTCCAGCTCCTGGTCCCATGCTCTGGATATATCGGTCCCTGGCAGCGTGCAACTCCTTA  1776

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1777  GCCAAAGACGTGGCAACTGCGGGTGAAGTATCTCTGGGCAGGAAATCAATGCAGAAATGCAACTGGGGAGAGGG  1850

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1851  GGCTTGGGGGCCAGTTCCAGGGAGATTGGAACTGCTGTGTTCTCATCAGCAGAAGTGGCCCCTGCCCACCCCCA  1924

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1925  TCCTAATCCCTTCTCATGTGGGAGAAGGTCTGTGAGCCCTCTCCCTACCAGGCAGGTTCTATGGCAATGTGGGC  1998

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1999  ACATACCCTGGGGCAGGGGCCGAGGGACTTAACTCACTTCATGAGCGCCAATGGAGGAGCGAAGGGAATGCCTG  2072

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2073  ATGAAAACAACATTCTACCAGTATGCACTGTTTTCTAACCTACAGAGTGCCTCTGTGTTCACTGTCCCATTTGA  2146

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2147  GAATTCTAAGTAGAATTCTGAACAGGCTGGAGCAGATTGCCCACCCCAAGGGACAGATGTTGGCTGGTACTGTT  2220

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2221  GGTATTCATGGAAGATTCCTTCTGACACTCCCTCCTTCTTTGTAATTGCCATGAACTGGAGCACTGGGCCAATA  2294

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2295  TAAATCATCCAAGGGTGAACACGCTGCACATGGACGGCTCCTCTTTGTTTTTGAAGGGATTCCATCTCTATTTT  2368

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2369  GCCATGTGCTCCTTCACCCCACTCCCCACCCCCGTCTTTCATTTCTTTCTCTGGAAAAGATACTTCAACTCACA  2442

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2443  GGACTGCGATGTTGAAACGGACACCCAAGAGCATCACAGATGGGCCAGGCCTGGACCTCTCGGGACAACATTCC  2516

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2517  TCACGACTTTTAGATAGAAGAGATTAGAGATTTGGGACTGGTGGCAACTGGTAACGTTTTCAGTGTTTGGTAAA  2590

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2591  CAGCCAGGGTCCGGAGCTCTGGGAACAGCCTGATTTAGCTCTTTGTTTAAGTTTTGTGTTAGAGGCTCCCAAGA  2664

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2665  AGCTGATGCAGGGGAAAGAAATTAACAACCATGGCTCATTCACAGCCAGGCAGCCAAATGGACAGCTCTATAAG  2738

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2739  ACTCAAGCCGACAGCGGAGAGAGTGCAACCAAACAGCCTTGGCCCAGCTTTCAGAGGAGAACGTTATTCACCCC  2812

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2813  AACTGCTCTGCATCTGCCTGGATGTCTGCCAAGATCTGTGAGCATTACAGCGTTGGTATGCTTTGGGTGAGGCC  2886

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2887  TGTGGCTATGGCAACAAGTTGGGAGCAACCCGGTCCCTGGGAATGAGAACAGTGTCTAAAATCAGGCAGGCGAG  2960

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 2961  GGGCAGGGAGGAGAGGTAAAGGTTGGACTTGCCTGAAGATGGAGCCGTTTTATTGTTGTGGGTAAAGCTGCTAC  3034

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3035  CATTAGGGGCTGTTTACAGAGTGGGTGCAGCTCAAGCTGGGAGCATGTTAGACTCAGCGACTACGATCAACCTA  3108

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3109  TTGACTTGTTCCCATGAGACAGAGTAAATTAACTGTTGCAGTACTGGTCATGTACCACCAACCTCCTGTGAACC  3182

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3183  AGCCCTCAGTGAAACATTTATGTGAAAGGCCATGGTGTTCCCATAAGAGGGTGCATGTTCTCTCCCTTGACTAA  3256

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3257  CTCTTCAGTATGCCTCATTCTCACGCGCTGGTGTGCAGGAAGGAGTCCAACATGCCCCATTGACAGTCATGCCC  3330

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3331  TGTATGTGGAAAGTCTTCAGGTAGAGCACTGGGCTCAGGTTTGAAGATGTGAGTTCTAATCCTAGCAAGGCCAT  3404

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3405  TACCTCCCAGTGACCTCATGTCTCGATTTCCTCAACCACAAAACAAAGGCATTGGTGAGCTGACCTCTAAGGCC  3478

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3479  TCTCCAGTTCTCACCTTCTGTGTCTCTACAGACTGGAGACTAGAAGATTATGGGCACTTTTATTGAGTCTTCAT  3552

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3553  TTTGTTTCCATTTCTTTGTAGTCATCAGCTGGAGTTGAGGACAAGTTTTAACAATAGATAGGTTTCTTTTTGTC  3626

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3627  TCTTTTTAAAAAATTTTATTTAAAATAAATGCCAAGTGTAGTGGCTCATACCTGTAATCCCAGCACTTTGGGGA  3700

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3701  GGCCAAGGTGGGAGGATTGCTTTTGAGTTTGAGACCAGCCTGGGCAACGTGGTGAGACCCTGTTTGTACAAAAA  3774

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3775  ATTTTAAATTAGCCAGGCATGGTGGCGTGTGCCTATAGTCCTAGCTACTCTGGAGGTAGAGGCAGGAGGATCCC  3848

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3849  TTGAACCTGGGAGGTTGAGGCCACAGTGAGCTGTGATTGTGCTATTGAACTCTAGCCTGGGCAACAGAGCAAGA  3922

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3923  CCCTGTCTCTTAAAAAAGACTATTTTTTAAGAACACTTTTAGGTTCACAGCGAAATTTGGAGGAAACTTGGCAT  3996

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 3997  ATGTCATATGCCCCCTGCTCCCATGCATGCACAGCCTCTACCATTAGCAATGTCCCCACTCAAATGGTACCTTT  4070

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4071  GTTGTAATCAACAACCCTGTACTGACACATCATCATCACCCAAACTCCATAGTTCACATTAGGTTTCACTCTTG  4144

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4145  GTGTGGTGTACATTCCATGGGCTTGAACAACTGTATAATGACATTATCCACCACTGCAGGATCATACAGAGTAG  4218

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4219  TCTCACTGCCCTAAAACTACTCTGTGCTCCACCTGTTTGTCCCTTCTTTCACTCTAAACTCCTGGCAACAACTG  4292

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4293  ACCTTTTTACTGCCTCGATAGCTTTGCCTTCTTCGGAATGTCATGTAGTTGAAATCATACATCATGAAGCCTTT  4366

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4367  TCAGATTGGCTTCATATAGGTTTCCTTCCTTCCTTCCTCCCACCACCTTCCTTTCTTTCTGTATTCCTAACTCT  4440

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4441  TGGATGTATTTTCCCCAGCATCATGACTTGATGGGACTTTTGCTAAGATAGGCAATCATAGAAAGTCATAAATC  4514

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4515  TCTTGTCAGCCTTATTGGCTCACCTCCGAGATGGTTCCAACACTCTTTAAGGCCCACTTTTCCAATCCACAGAT  4588

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4589  TCCCCAGCAGAAGTCCAAGCTGCTGAGCCTCACATCATCTTTTGCACTAGTAATCTTTACCACTACTTCACTGT  4662

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4663  AGCATTTGAAAATTTTCATATGAAGCCATAGTTCTGTGTCTTTTTTTTTTTTTTTTTTTTTTTGGAGACGGAGT  4736

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4737  CTTAACCTGTTGCCCAGGCTGGAGTGCAGTGGCACAGTCTTAGCTCACTGCAAGCTCCGCCTCACGGGTTCAAG  4810

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 4811  TGATTCTTGCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCGCGCCACCATGCCCAGCTAAATTTGTTGGCATT  4884

Query    1  ----------ATGGGGTTTCTCCATGTCGGTCAGGCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCT  64
                      ||||||||||.||||||.||.|||||||||||..|||||||.|||||||||||||.|||..|||
Sbjct 4885  TTTAGTAGAGATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTTACCTCAGGTGATCTGCCTGCCT  4958

Query   65  CAGCCTCC------------------------------------------------------------------  72
            ||||||||                                                                  
Sbjct 4959  CAGCCTCCCAAAGTGCTGGGATTAAAGGTGTGAGCCACCGCACCTGGCCTGAAGCCATAGTTCTTAACCTCAGT  5032

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5033  TGTGCAATAGAATTATCTGGGGAATTTAAAAATTAGAAAAAACCCATGCCCTGAAGATTGTGATCTAACTGGTC  5106

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5107  TTGCGTAGCGCCTGGGCATTGGTATTTTTTAAATGTTTCCCAACTGATACTAATGTGGCCATTCTGCAAGCCAC  5180

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5181  AGTTGAAAGGCTTATTCAAGCATCCTGTTGCTGAATGCATGTCGTCCTTACCACATGACTCTGGAGGTTTTCTT  5254

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5255  GTATTCTGATGTGGCTGCCCTGTTGAGGCCTGCCCCTTAGAGTGGAGATTATCCCCTGCAGTAGGCTGCCTGGA  5328

Query   73  --------------------------------------------------------------------------  72
                                                                                      
Sbjct 5329  ATATGATCCCCAGTGATCCCTGCTTCCTGGTATTCAGGCCCTGGTGTGATCCCTTTCCCTTGAAGCCTGGGCTG  5402

Query   73  ------------------------------------------------------------  72
                                                                        
Sbjct 5403  GATTAGTGACTTGCTTCTAACCAACAGCATATGGCAAAAATAAATGTTTATTGTTTTAAA  5462

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