Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10261
- Subject:
- XR_928786.2
- Aligned Length:
- 7340
- Identities:
- 66
- Gaps:
- 7268
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CCCTTTCACCTCGCGGCCGTAGGCTAACGTGGAAGTCGGACCAGCCGGCCGGCGGAAGAACCTAGAGCGCGCTG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CCTGGCGAGTCAGGCGCGCGGGGCGGCGTTGGTGGTCTTCGCGGCGCAACTCGGCCTTTCCTGGGAGGGAGTGA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGGGGCGCACCGGGGCCGGGGAGCGGGCGCCAGTGTAGCCCGCGCGGCGCCTGGCCCGGAGCGCGGCGGCTGCG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCGGCGGCGGCGGCGGGCGCTGGAGGCCTGTGAGAGCCGCAGCCCGGAGCGCCCGGCTTCCCACGCCATGGCCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCATGGGCATCCGCCTTTCCCCACTGGGGGTGGCAGTGTTTTGCCTGCTGGGGCTCGGCGTGCTCTACCACCTC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TACTCGGGCTTCTTGGCCGGCCGCTTCAGCCTCTTCGGCCTGGGCGGCGAGCCTGGCGGCGGCGCGGCGGGGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGCGGCCGCGGCCGATGGGGGCACCGTGGACTTGCGCGAGATGCTGGCTGTGTCAGTGCTGGCCGCAGTCCGCG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GCGGCGACGAGGTGAGGCGCGTCCGCGAGAGCAACGTCCTCCACGAGAAGTCCAAGGGGAAGACGCGCGAGGGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCCGAGGACAAGATGACCAGCGGCGACGTGCTGTCCAACCGCAAGATGTTCTACCTGCTCAAGACCGCCTTCCC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CAGCGTCCAGATTAATACTGAGGAACACGTGGATGCAGCTGATCAGGAGGTTATCTTGTGGGATCATAAGATTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 CTGAGGATATCCTAAAGGAAGTAACTACTCCTAAAGAGGTACCAGCAGAAAGTGTTACTGTCTGGATTGACCCA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CTTGATGCTACACAGGAATATACAGAGGATCTTCGAAAGTACGTCACTACTATGGTGTGTGTGGCTGTAAATGG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TAAACCCATGCTAGGAGTTATACATAAGCCATTTTCCGAATATACAGCCAGAAATAAGCTGGTGATGCAGCTGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTTCATTACTAGCCATGGTGGACTATATCTTGCCCTGTAGTGAGTGACTGCTAAAACAACAATCTAATTGGGAT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AATTCTGACTTGGGCAATGGTAGATGGTGGTTCAAATGTGAAAGCCCGCTCTTCCTACAATGAGAAGACCCCAA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GGATCGTTGTGTCTCGTTCCCATTCAGGGATGGTCAAACAGGTCGCTCTTCAGACTTTTGGAAACCAGACTACA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ATTATCCCAGCTGGTGGTGCTGGTTATAAAGTTTTAGCACTTTTGGATGTGCCTGATAAGAGTCAAGAAAAAGC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TGATTTATACATCCATGTGACATACATCAAAAAGTGGGATATATGTGCTGGTAATGCCATCTTAAAAGCCCTAG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GGGGGCATATGACTACCCTGAGTGGTGAAGAAATCAGTTACACTGGTTCAGACGGCATTGAAGGGGGACTCCTT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GCTAGCATCAGAATGAACCACCAGGCCCTGGTCAGAAAACTCCCAGATCTAGAAAAGACAGGACATAAATGAGC 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATAACTGATTACAGGGTACAGTTCTTCACAGCTGAAATGGTTAGCCTGAGATGCTGGAAGCTTCAAAGGATTGG 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 TGGAGACTATGCATGGTTAAGGCCATCCCGAACTTTTTAAAGTATTTATGAAGCATCAGAGACTTATTTTCCCT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GTAATAGAATGCAAAATCAGGGAAAATGGGTTGCTTTGTGTCTCAAGTATTGTCTTTATTTTTGAGACTATTTT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 CATACAGTTGTCATACACAAGGCGCATATATATATTTGTGAATTAAAATCTGTAGCTGAGTCTACATTGTTATG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 AGTCACCATTTTCACACAACATCATGAATCTTCACTGTTAGTACTTTCATATAGAATTCGGTTGAAGGAAAGAT 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGATTTTTGTGTAGATGTTTAATATAACTTTACAACTATATCTCATTGAAAATAAAGTCATTGGGGATTTTTAC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 CTCTAATTTGGATGGAAAGCACAAGAAGCCACACATTCATTAATATGCAACAAATGTTGTATTTATGTTACTGA 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 ATATTTCTATGGATTAAAATAGAAAAAGTTTAATTGATTTTTTCTTTTAAATTTTAATAACAGGTTCACCAGCT 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GGTAGAAAATAGAGACACATGATGATTTGCATTGTAATAATTTCTGTGTGTATGTGTGTGTGTTGTTTTGTTTT 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 TATAAAGAAAAGTGTGTTTGTACCCATGAGTTCAGCATTTCTGCCATCTTGCTATTTTCATTTTCCCTGTGGAA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GATGCATGGTTGCATCCTTTTCCTTCTGACCAACACTTAGTCTTTAACTTTGTAAGGTTCGGTTTAAGGTTTCA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GGGTTAGCACTATAGTTTTGGTTCATTTTCTCATTAACGATAAAATATGCTGTAAGGCACTATAAGAATATAAA 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TGATTCTATTACAATTGAAAGTTACTTGACATTACATGAATTGAACTGCCTTTCATTATCTTCAGACACTTTGT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 TTTAGTATTTTTTTTTAATTTGCTAGGTTTGTATATAGAAGATCCTTTCATTATCAAGAATGAGTATGGTTGCT 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TTTGCCATGGTTGCTTTTACTATTAATAAATGTATCTAGCCTACCCAAACTCTGTAGTAACTTTTGAGATTCTC 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TTAATTTCCCCTCAGATTAAAATAGAGAAGGTTGAAGGTACTTTTTGATGAAATTTTTTTCTAGTCTGGTTAGA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 AAAAAAAAGTTGTGACATATTCATTGTGTTACCGTAACTAGAACCTTGCTTTGTGAACTGTCTTTCATTGGGAT 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GTATGGTTTCTCTCAATGTGAAATCTGGAAACTTCATGTAAACTACCCATGCCGTTATTTCATGTGACTCCAGT 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 GCCCTTGTATTCCATAACATGCTGATGAGAGGGATTTCTCACGGTTTCTTTCTTTGCTAAATTTTTTAACCATA 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AAGCAGCTTACCCTTTATTTTCCCATCTTGGAAGTAAAATTGACCAAAGAATGTACGTTCTAGCCTGGTGGAAT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 GTGCATACTTTAGGTTTGTATGTTACATTGTCCAAAGCCCTTTACTTTCTTATTAGTAAACTGAATCTAATATG 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 ACACAAATGTTTTCACCCAATCTCTTGCAACTGGTCAAATTCGAGAAGGTGTTGGGCCTTAGCAGTAGGCCTTT 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 TCAGTGAAAATTCATTCAAAGTTTTGGTAGGTGGAACACTTGATATTTAAATAGGACTTGAAAATTTTGAAAAG 3182
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3183 AGTATCAGAGACCTCATTTTTTTCCTTTGCAATAAGCTGAAGAAACTTTCTTTTTCAGGAGAGATGGCAAAGGT 3256
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3257 ATATGCTGTTGCCAGAGTCCTGTGGTATAAGCATCTGTTTTTATTATAGTATGTCAAAGTTAGGGAAATGGGAC 3330
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3331 TGGCAAGTAAAAAATGGAATTTAATTTCAATGTTTTATGGGAACTCTGATTTAATGGGAAGCAAACTAGTTCAT 3404
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3405 ATTAGCAGGAATTATTTTATTTTTTCGAGACAGAGTTTCACTCTCGTTGGCCAGGCTGGAGTGCAATGGCGTGA 3478
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3479 TCTCGGCTCACCGCAACCTCTGCTTCCCGGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCAAGTAGCTGGGATT 3552
Query 1 --------------------------------------------------ATGGGGTTTCTCCATGTCGGTCAG 24
|..||||||||||||||.||||||
Sbjct 3553 ACAGGCATACACCACCACACCCAGCTAATTTTTTTGTATTTTTGTTAGAGACAGGGTTTCTCCATGTTGGTCAG 3626
Query 25 GCTGGTCTGGAACTCCTGACCTCAGGTGATCCGCCCACCTCAGCCTCC-------------------------- 72
||||||||.|||||||.||||||||||||||||||||||||.||||||
Sbjct 3627 GCTGGTCTCGAACTCCCGACCTCAGGTGATCCGCCCACCTCGGCCTCCCAAAGTGATGATTTTATTTTTATTTT 3700
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3701 TAATTGTATTAATCTGCATCTAGATAATGACTTTGTGAAGGGTGTGTGTTGTGTGCAAAACTTAAGGTATTGGT 3774
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3775 TGAGAGTTAAATACATTATTTTTATAATATGTTGGGTATAGTCTAGTTACTAATGATTTTTTTTAAGTACTTTT 3848
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3849 ATAAAAAGTTCATTTTTAAAATTGTTTGTTTTTAAAAGCCAATATACGTTGCAGAATTAGGAACAGTATTTATA 3922
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3923 TTTATTTACACAAGACATTGTGCCATAGCATCCTAGTAAAACACCTTCATGAATGAGTAATGTTATCTCCCAGA 3996
Query 73 -------------------------------------------------------------------------- 72
Sbjct 3997 ATTACATTAAAATTATTTCTAAAAAGTAGCAAAGTCATTACCTTTTGCTTTTAATGACCCACACCTCACCAGCT 4070
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4071 CCTGGTCTTTTCTTCACTGTTGCCCTTATTTTGAGGCAATTTTTCTTAAAATATGACTTTTATGCACCACATTT 4144
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4145 AGTAGAGGCAGTGACATCAGTGATCTCAGTACCCATCAGCTGTCCCCCTCCTCTGCCCTTCTTCATCTCTTCTA 4218
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4219 CCTTGTGACCATTTCCCTTACCGGTTCATGTTCTCCTTTATCTCTGCTTTTCTTTCTTAGCCAGGATACTTCCC 4292
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4293 TCACAACTCTCACTCCCAAATTCTTTTAGATATACATTTTTCTGGATATTGGCTGCTGAAATCTGAAGCTCTGG 4366
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4367 TAAAGTTCCTAGTATCAGAGATCAATCCTGGAGGAGGCCTAGTTCACTATTAGATTACAAAGACTCCTCACAAA 4440
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4441 GTAAAGGAAAATCACCTTCAAAACCACAACCCTTTATGTTGTCAAGTCTAATATGAGTGTTTTTACGAAGTATT 4514
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4515 TCTTTCTACCCATTGTTCAAGAATGTAAATGTAAAAAAAAATACAAGAGAGTTGGGTAGATATGCATGCTTGAG 4588
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4589 GAAACTTGCTTTTACTGTTTTCCTACTTGTATCCCCAGTTCAGTTGAATTTACAAGGACCTACAAGATGGTCAT 4662
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4663 GTTTGTCTTGGTATGTGCTACCCCAATTTTAGTGTTTCTTTCTTTATTTTAAATCAGTAATTATTCAGTTGATT 4736
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4737 GTTTATACTATATAATGAAGTAACAAAAACATTTTGGTTTGTATGTTTTAAGTAACAGTTGTGCAAATTCCTCT 4810
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4811 TGTTTGTTAGGTGCTCCCTTTGAATATTTTGTGAACTGTGTCAGAGGGAGAGGGGTGGTGGCTAGGAAGAGGGT 4884
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4885 CAGAAAGAAGCTAGAGGGAGGTCAGGAGAAGGGTAACAGGGAGGATGCAAAGCAGACATCTACCCTGGTCACCC 4958
Query 73 -------------------------------------------------------------------------- 72
Sbjct 4959 CAGGATCAGGATATCTGTCCTTGTTTCATGTTGAATTCAAAAATTGGATCTCACTTAGGCTTTGAAGGTGACAG 5032
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5033 CCATCTCTGATAGCTGAGCATAAGTAAAGAAAGGTGGAGTGCCGATGCAGAAAGGAAAATATTCAGCTTTCCTC 5106
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5107 TCTTAGATCGCACTTTGAAGATGGCCTTTTGGAGACAATCTGACAGGTTAAAACAGGAACTGTTGGAATTATTC 5180
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5181 TAGCTGTAACTACCTATTGGCTATGTGTTGATTGATCCTAGAAAGAAAAAATAATTTTTCATTTTAGATCTTGA 5254
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5255 TTGAATTTAAGATGTATTTATATGCCTACAAAAGGTCTGTCTTGTAACTGTTGTATAAAATAAACCTAATCTAT 5328
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5329 GGTTTCATTTTTAATCTAAAAAAAGTTGTGCCTTAACAATAGGGCATTGTATGTTAATAAGGGAAAACAACCTT 5402
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5403 TTTAGTAGATGGGGGAAAATAGGAACTTTTTGCCATTAAAACTTAAGTTCTTTTGATGTTTTTAATATTATAGT 5476
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5477 TGGGGGAGATTCATTAAAATTAAATTGAAATAAAATTATTTTTGCATAACCTAGCATTTACAACTAAAGTATGT 5550
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5551 TTTTTATAAGAACTGGCATCTTGATGTATATAGGTCTGAAATAATATTTCATCTTTTGATTTTTAATTTTAATA 5624
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5625 ATATTAGACCAGGATAGATCACAGTTTTACAAATCTTAGTTTTAAATAAATTATTTCAGTGTGCTGTTAGTCCT 5698
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5699 CTACAGTCATTTTGGTTTAAAAAGTGACTATTTATTTATGGTAGCATATCAATAATTTATTAATGTTAAAAAAT 5772
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5773 ACTGTGTATGACATTACAAACCAGAACAGTTCCTGGGGGAGAGGATTCTAATTGATTGGCAGTTCTGAGAGGGC 5846
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5847 AAGAAGAATGGAACTTTATACTTCAAAAGGAGGTTTTGGTTTTACCAGGTACTGCTTATGTAAATCGTTTATTT 5920
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5921 TTATTTCATCAAAGCCTGGCAAGTATATGCATTCCAATTTACCATTGGCAAAGCTTTATTTATTTTTAAGGTTG 5994
Query 73 -------------------------------------------------------------------------- 72
Sbjct 5995 GATGTTGAATTAATTTTGTGGGAAAATGAGATTTGTAAGTAGTTTTCTTTCTAGATAAGATAACATAAACCAAA 6068
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6069 CTTTCAGAAGTTAAGGATGATGAATAATATTGAAATGACTTGTTATATATTGTAAGGGTTCCCTTAAGTATCAT 6142
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6143 AATTAACAATTTGTGGAAATTGAAAAAGCATAAACTGTGTTATTTGATTAGTAATATGTTCCCTTAAAATTCAT 6216
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6217 TTTGAGGTGTATGTTATACACACAGTAAATTTTTGTTCAGGAATGACTTGCTCATTCTGTGTTTTTAAAAATAG 6290
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6291 GAAATAAGGCATAGTGAGTCATCATTACATCAATTAACCAAAAAATATTTCATCCCCTCCGTCACTGAAATTAT 6364
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6365 CTACTTCAGCCACCTTTCTTATTCTCGTGTTAGGAGGGCACGTTTATGGACTTTTTAATTTCCATGTGCCATAT 6438
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6439 TGTCCACTACCGGCAGTAGCCAAAGCTAGCTGTTTCAGTCCCACAGAAGAGACAGTGCTCTGCCATGATGACAG 6512
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6513 GGCACTGCTAGGGCTGGTTTTTCTTGTTTTTCCCTTTTGGCAGTGTGGACTTCAGGAACTAGATGTATATGCAC 6586
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6587 AAGGGATTGAGTTTACACTAAAACTAGGAAATGGAGTTTTCAATCTATGTTCTTGCCTCTTCATACTTTTATTT 6660
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6661 ATTTTTTGTCATCCTGCCTTATACTGGGCTAACAATGAGATAAAATAAAAATACCTTTGAATACTCTTTTCCCT 6734
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6735 TTCATGCATTTAAAGCCATGGAGGAACTAGACCATTAGCTGTTGCCGTCACATGCTTAGACACCAGTTTACTTA 6808
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6809 GCGTGTTATGACCTTCCTCACCCATACTACCAAATTTAAATGGGTCCCGACTTCACCCTCTGGAAGGAAGTAAA 6882
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6883 CTCTTCTCTCCCCATGGTTTCAGAGCAGTTTTTACCTGCAAGCACCATCTCTGTATGTGCTCTTACTAGATTAT 6956
Query 73 -------------------------------------------------------------------------- 72
Sbjct 6957 ACAGTTCTTGAGAGGGATTGCATCTTAGTGTTTTTGTATTTCCACCTCACCCCCAGCACATAGCCCAGTCTCTT 7030
Query 73 -------------------------------------------------------------------------- 72
Sbjct 7031 GCACAAATTAAGTACTTAATGTGTGTTGAGCTAAATTGAATAAAGGATTATTAGCATTAGCATATTTTGTGCCT 7104
Query 73 -------------------------------------------------------------------------- 72
Sbjct 7105 TGGTTGTATAAGCTGGTTGTTTGTTTTGTTACCTTTGCAAATATTTATGATTATCACCCCCCCACATACTAAAT 7178
Query 73 -------------------------------------------------------------------------- 72
Sbjct 7179 TGTTTTTAAAAGTTTTGCCTTTCCTTCAGATACTACCCCAGGCAATTTGCTGTAGATAATGTGATTGCTTCCAA 7252
Query 73 -------------------------------------------------------------------------- 72
Sbjct 7253 TGACATAATTATCCCAAACTCTCTGCCCCGGATATACTTTGCCAAACGAAATTTGAATTCTCTGAATAAATTGG 7326
Query 73 -------------- 72
Sbjct 7327 TCATGTCTAAAAGA 7340
