Nucleotide Global Alignment

Description

• Query: ccsbBroad304_10263
• Subject: NM_001300832.3
• Aligned Length: 1392
• Identities: 897
• Gaps: 453

Alignment

Query    1  ATGGACGGGACGGAAGGCAGTGTCGGGCAGCCCGGCCCCACTGAGCGGTCCCACCGAAGCAGCGTGTCCTCCGT  74
            |||||||||||.||||||||||.||||||||||||||||.|||||||.||||||||||||||||||||||||||
Sbjct    1  ATGGACGGGACAGAAGGCAGTGCCGGGCAGCCCGGCCCCGCTGAGCGATCCCACCGAAGCAGCGTGTCCTCCGT  74

Query   75  GGGAGCCCGAGCGGCTGACGTGCTGGTATACCTGGCAGATGACACGGTGGTGCCCCTGGCTGTGGAGAACCTGC  148
            ||||||||||                                                                
Sbjct   75  GGGAGCCCGA----------------------------------------------------------------  84

Query  149  CCTCGCTCCGTGCCCATGAGCTGCACTGCGCCGTCCGCGAGGTCCTGAAGCTTCCGGACATCGCCCTGGATGTC  222
                                                                                      
Sbjct   85  --------------------------------------------------------------------------  84

Query  223  TTCGCGCTCTGGCTGGTCTCCCCTCTGCTGGAGGTGCAGCTGAAACCCAAGAACCAGCCCTACAAGCTGGGACG  296
                                          |||||||||||||||||||||.||||||||||||||||||||||
Sbjct   85  ------------------------------GAGGTGCAGCTGAAACCCAAGCACCAGCCCTACAAGCTGGGACG  128

Query  297  CCAGTGGCCGGAGCTGCTGCTGCGCTTCACCAGTGCCCCGGACGACGACGTGGCCATGGATGAGCCTTTCCTGC  370
            |||||||||||||||||||||||||||||||||||||||.|||||.||||||||||||||||||||||||||||
Sbjct  129  CCAGTGGCCGGAGCTGCTGCTGCGCTTCACCAGTGCCCCAGACGATGACGTGGCCATGGATGAGCCTTTCCTGC  202

Query  371  AGTTCCGAAGGAACGTGTTCTTCCCAAAGGGGCGGGAGCTCCAGATCCCCGACGAGGAGGTCCTGCGGCTGCTC  444
            |||||||||||||||||||||||||||||.||||||||||||||||||..||||||||||||||||||||||||
Sbjct  203  AGTTCCGAAGGAACGTGTTCTTCCCAAAGCGGCGGGAGCTCCAGATCCATGACGAGGAGGTCCTGCGGCTGCTC  276

Query  445  TATGAGGAGGCCAAGGGCAACGTGCTGGCTGCACGGTACCTGTGCGACGTTGAGGACTGCGAGGCTCTGGGCGC  518
            ||||||||||||||||||||||||||||||||||||||||.|||||||||.|||||||||||||||||||||||
Sbjct  277  TATGAGGAGGCCAAGGGCAACGTGCTGGCTGCACGGTACCCGTGCGACGTGGAGGACTGCGAGGCTCTGGGCGC  350

Query  519  CCTGGTGTGCCGCGTGCAGCTCGTGACCTACCAGCCCGACTGGCCGGCAGCCTGCGACCTGAGGGAGAAGCTGG  592
            |||||||||||||||||||||.|.|.||||||||||||.|.|||||||||||||||||||||||||||||||||
Sbjct  351  CCTGGTGTGCCGCGTGCAGCTTGGGCCCTACCAGCCCGGCCGGCCGGCAGCCTGCGACCTGAGGGAGAAGCTGG  424

Query  593  ACTCCTTCCTCCCTGCCCACCTCTGTAAGCGGGGCCAGGGTCTCTTTGCTGCCCTCCGGGGCCGTGGGGCCAGG  666
            ||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct  425  ACTCCTTCCTCCCTGCCCACCTCTGTAAGCGGGGCCAGAGTCTCTTTGCTGCCCTCCGGGGCCGTGGGGCCAGG  498

Query  667  GCCGGGCCGGGTGAGCAGAGCCTGCTGAACGCCTACCGCAAGGTGCAGGAGGTCAGCAGCGACGGCGGGTGTGA  740
            |||||||||||.||||||.||||||||||||||||||||.|||||||||||||||||||||||||||||||.||
Sbjct  499  GCCGGGCCGGGCGAGCAGGGCCTGCTGAACGCCTACCGCCAGGTGCAGGAGGTCAGCAGCGACGGCGGGTGCGA  572

Query  741  GGCCGCCCTGGGCACCCACTACCGCGCCTACCTCCTCAAGTGCCACAAGCTGCCCTTCTATGGGTGTGCCTTCT  814
            ||||||||||||||||||||||||||||||.|||||||||||||||.|||||||.||.||||||||||||||||
Sbjct  573  GGCCGCCCTGGGCACCCACTACCGCGCCTATCTCCTCAAGTGCCACGAGCTGCCGTTTTATGGGTGTGCCTTCT  646

Query  815  TCCACGGTGAGGTTGACAAGCCAGCCCAAGGCTTTTTGCACCGGGGTGGGCGCAAATCAGTTTCTGTGGCCATC  888
            ||||||||||||||||||||||.||||||||||||||||||||||||||||||||..|||||||||||||||||
Sbjct  647  TCCACGGTGAGGTTGACAAGCCGGCCCAAGGCTTTTTGCACCGGGGTGGGCGCAAGCCAGTTTCTGTGGCCATC  720

Query  889  AGCCTGGAAGGTGTGCACGTCGTGGACAGCAGAGAGAAGCACGTCCTGCTGGGCCTGTGCTTCCAGGAGCTGTC  962
            ||.||||||||.|||||||||.|.||.||||||||||||||.|||||||||||||||.||||||||||||||||
Sbjct  721  AGTCTGGAAGGCGTGCACGTCATCGATAGCAGAGAGAAGCATGTCCTGCTGGGCCTGCGCTTCCAGGAGCTGTC  794

Query  963  GTGGGACCACACCTCCCCTGAGGAGGAGGAGCCCATCCTGTGGCTGGAGTTCGACAGGGACAGCGGGGTCACAC  1036
            ||||||||||||||||||.||||||||||||||||||.|||||||||||||||||.|||||||||.||.|||||
Sbjct  795  GTGGGACCACACCTCCCCCGAGGAGGAGGAGCCCATCTTGTGGCTGGAGTTCGACGGGGACAGCGAGGGCACAC  868

Query 1037  CTGTCAACAAGCTCCTCAAGATCTACTCCAAGCAGGCCGAACTGATGAGCAGCCTCATTGAGTACTGCATC---  1107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||   
Sbjct  869  CTGTCAACAAGCTCCTCAAGATCTACTCCAAGCAGGCCGAACTGATGAGCAGTCTCATTGAGTACTGCATCGAA  942

Query 1108  --------------------------------------------------------------------------  1107
                                                                                      
Sbjct  943  CTGAGCCAGGCGGCGGAGCCCGCAGGCCCCCAGGACAGTGCGACTGGCTCGCCCTCGGACCCCAGCTCCTCACT  1016

Query 1108  --------------------------------------------------------------------------  1107
                                                                                      
Sbjct 1017  GGCTCCTGTTCAGCGCCCCAAGCTGCGGAGGCAGGGCAGTGTGGTGTCCAGCCGGATCCAGCATCTCTCCACCA  1090

Query 1108  --------------------------------------------------------------------------  1107
                                                                                      
Sbjct 1091  TCGACTACGTGGAGGACGGCAAGGGGATCAGGCGAGTGAAGCCGAAGCGCACCACATCCTTCTTCAGCCGGCAG  1164

Query 1108  ------------------------------------------------------------  1107
                                                                        
Sbjct 1165  CTGTCCTTGGGCCAGGGGAGCTACACCGTGGTGCAGCCCGGCGACAGCCTGGAGCAGGGC  1224