Nucleotide Global Alignment

Description

• Query: ccsbBroad304_10263
• Subject: NM_001300833.3
• Aligned Length: 1392
• Identities: 959
• Gaps: 387

Alignment

Query    1  ATGGACGGGACGGAAGGCAGTGTCGGGCAGCCCGGCCCCACTGAGCGGTCCCACCGAAGCAGCGTGTCCTCCGT  74
            |||||||||||.||||||||||.||||||||||||||||.|||||||.||||||||||||||||||||||||||
Sbjct    1  ATGGACGGGACAGAAGGCAGTGCCGGGCAGCCCGGCCCCGCTGAGCGATCCCACCGAAGCAGCGTGTCCTCCGT  74

Query   75  GGGAGCCCGAGCGGCTGACGTGCTGGTATACCTGGCAGATGACACGGTGGTGCCCCTGGCTGTGGAGAACCTGC  148
            |||||||||||||||||||||||||||||||||.||.|||||||||||||||||||||||||||||||||||||
Sbjct   75  GGGAGCCCGAGCGGCTGACGTGCTGGTATACCTAGCGGATGACACGGTGGTGCCCCTGGCTGTGGAGAACCTGC  148

Query  149  CCTCGCTCCGTGCCCATGAGCTGCACTGCGCCGTCCGCGAGGTCCTGAAGCTTCCGGACATCGCCCTGGATGTC  222
            ||||||||.|||||||||||||||||.||||.|||||||||||||||.|||||||.||||||||||||||||||
Sbjct  149  CCTCGCTCAGTGCCCATGAGCTGCACCGCGCTGTCCGCGAGGTCCTGCAGCTTCCAGACATCGCCCTGGATGTC  222

Query  223  TTCGCGCTCTGGCTGGTCTCCCCTCTGCTGGAGGTGCAGCTGAAACCCAAGAACCAGCCCTACAAGCTGGGACG  296
            ||||||||||||||||||||||||||||                                              
Sbjct  223  TTCGCGCTCTGGCTGGTCTCCCCTCTGC----------------------------------------------  250

Query  297  CCAGTGGCCGGAGCTGCTGCTGCGCTTCACCAGTGCCCCGGACGACGACGTGGCCATGGATGAGCCTTTCCTGC  370
                                                                    ||||||||||||||||||
Sbjct  251  --------------------------------------------------------TGGATGAGCCTTTCCTGC  268

Query  371  AGTTCCGAAGGAACGTGTTCTTCCCAAAGGGGCGGGAGCTCCAGATCCCCGACGAGGAGGTCCTGCGGCTGCTC  444
            |||||||||||||||||||||||||||||.||||||||||||||||||..||||||||||||||||||||||||
Sbjct  269  AGTTCCGAAGGAACGTGTTCTTCCCAAAGCGGCGGGAGCTCCAGATCCATGACGAGGAGGTCCTGCGGCTGCTC  342

Query  445  TATGAGGAGGCCAAGGGCAACGTGCTGGCTGCACGGTACCTGTGCGACGTTGAGGACTGCGAGGCTCTGGGCGC  518
            ||||||||||||||||||||||||||||||||||||||||.|||||||||.|||||||||||||||||||||||
Sbjct  343  TATGAGGAGGCCAAGGGCAACGTGCTGGCTGCACGGTACCCGTGCGACGTGGAGGACTGCGAGGCTCTGGGCGC  416

Query  519  CCTGGTGTGCCGCGTGCAGCTCGTGACCTACCAGCCCGACTGGCCGGCAGCCTGCGACCTGAGGGAGAAGCTGG  592
            |||||||||||||||||||||.|.|.||||||||||||.|.|||||||||||||||||||||||||||||||||
Sbjct  417  CCTGGTGTGCCGCGTGCAGCTTGGGCCCTACCAGCCCGGCCGGCCGGCAGCCTGCGACCTGAGGGAGAAGCTGG  490

Query  593  ACTCCTTCCTCCCTGCCCACCTCTGTAAGCGGGGCCAGGGTCTCTTTGCTGCCCTCCGGGGCCGTGGGGCCAGG  666
            ||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||||||||||
Sbjct  491  ACTCCTTCCTCCCTGCCCACCTCTGTAAGCGGGGCCAGAGTCTCTTTGCTGCCCTCCGGGGCCGTGGGGCCAGG  564

Query  667  GCCGGGCCGGGTGAGCAGAGCCTGCTGAACGCCTACCGCAAGGTGCAGGAGGTCAGCAGCGACGGCGGGTGTGA  740
            |||||||||||.||||||.||||||||||||||||||||.|||||||||||||||||||||||||||||||.||
Sbjct  565  GCCGGGCCGGGCGAGCAGGGCCTGCTGAACGCCTACCGCCAGGTGCAGGAGGTCAGCAGCGACGGCGGGTGCGA  638

Query  741  GGCCGCCCTGGGCACCCACTACCGCGCCTACCTCCTCAAGTGCCACAAGCTGCCCTTCTATGGGTGTGCCTTCT  814
            ||||||||||||||||||||||||||||||.|||||||||||||||.|||||||.||.||||||||||||||||
Sbjct  639  GGCCGCCCTGGGCACCCACTACCGCGCCTATCTCCTCAAGTGCCACGAGCTGCCGTTTTATGGGTGTGCCTTCT  712

Query  815  TCCACGGTGAGGTTGACAAGCCAGCCCAAGGCTTTTTGCACCGGGGTGGGCGCAAATCAGTTTCTGTGGCCATC  888
            ||||||||||||||||||||||.||||||||||||||||||||||||||||||||..|||||||||||||||||
Sbjct  713  TCCACGGTGAGGTTGACAAGCCGGCCCAAGGCTTTTTGCACCGGGGTGGGCGCAAGCCAGTTTCTGTGGCCATC  786

Query  889  AGCCTGGAAGGTGTGCACGTCGTGGACAGCAGAGAGAAGCACGTCCTGCTGGGCCTGTGCTTCCAGGAGCTGTC  962
            ||.||||||||.|||||||||.|.||.||||||||||||||.|||||||||||||||.||||||||||||||||
Sbjct  787  AGTCTGGAAGGCGTGCACGTCATCGATAGCAGAGAGAAGCATGTCCTGCTGGGCCTGCGCTTCCAGGAGCTGTC  860

Query  963  GTGGGACCACACCTCCCCTGAGGAGGAGGAGCCCATCCTGTGGCTGGAGTTCGACAGGGACAGCGGGGTCACAC  1036
            ||||||||||||||||||.||||||||||||||||||.|||||||||||||||||.|||||||||.||.|||||
Sbjct  861  GTGGGACCACACCTCCCCCGAGGAGGAGGAGCCCATCTTGTGGCTGGAGTTCGACGGGGACAGCGAGGGCACAC  934

Query 1037  CTGTCAACAAGCTCCTCAAGATCTACTCCAAGCAGGCCGAACTGATGAGCAGCCTCATTGAGTACTGCATC---  1107
            ||||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||   
Sbjct  935  CTGTCAACAAGCTCCTCAAGATCTACTCCAAGCAGGCCGAACTGATGAGCAGTCTCATTGAGTACTGCATCGAA  1008

Query 1108  --------------------------------------------------------------------------  1107
                                                                                      
Sbjct 1009  CTGAGCCAGGCGGCGGAGCCCGCAGGCCCCCAGGACAGTGCGACTGGCTCGCCCTCGGACCCCAGCTCCTCACT  1082

Query 1108  --------------------------------------------------------------------------  1107
                                                                                      
Sbjct 1083  GGCTCCTGTTCAGCGCCCCAAGCTGCGGAGGCAGGGCAGTGTGGTGTCCAGCCGGATCCAGCATCTCTCCACCA  1156

Query 1108  --------------------------------------------------------------------------  1107
                                                                                      
Sbjct 1157  TCGACTACGTGGAGGACGGCAAGGGGATCAGGCGAGTGAAGCCGAAGCGCACCACATCCTTCTTCAGCCGGCAG  1230

Query 1108  ------------------------------------------------------------  1107
                                                                        
Sbjct 1231  CTGTCCTTGGGCCAGGGGAGCTACACCGTGGTGCAGCCCGGCGACAGCCTGGAGCAGGGC  1290