Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10279
- Subject:
- XM_017030085.2
- Aligned Length:
- 1215
- Identities:
- 376
- Gaps:
- 804
Alignment
Query 1 ATGGCACATGTTTCTTCAGAAACTCAAGATGTTTCCCCCAAAGATGAATTAACTGCTTCAGAAGCCTCCACTAG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 GTCTCCATTGTGTGAACACACCTTCCCTGGGGACTCAGACTTACGGTCAATGATTGAAGAACATGCTTTTCAGG 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 TTTTGTCACAAGGATCCTTGTTAGAAAGTCCAAGTTACACAGTTTGTGTCTCTGAGCCAGATAAAGATGATGAT 222
.||.|..||||.||
Sbjct 1 ---------------------------------------------ATGGCATTGAGACA--------------- 14
Query 223 TTTCTTTCTCTGAACTTTCCCAGGAAACTTTGGAAAATAGTGGAAAGTGACCAATTCAAGTCTATTTCATGGGA 296
|||| .|..|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 15 --------TCTG---GTGGCCAGGAAACTTTGGAAAATAGTGGAAAGTGACCAATTCAAGTCTATTTCATGGGA 77
Query 297 TGAGAATGGAACTTGCATAGTGATTAATGAAGAACTCTTCAAGAAAGAAATTTTGGAAACAAAGGCTCCTTACA 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 78 TGAGAATGGAACTTGCATAGTGATTAATGAAGAACTCTTCAAGAAAGAAATTTTGGAAACAAAGGCTCCTTACA 151
Query 371 GAATATTTCAAACTGATGCTATCAAAAGTTTTGTTCGACAGCTCAACCTTTATGGATTTAGTAAAATTCAACAG 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 152 GAATATTTCAAACTGATGCTATCAAAAGTTTTGTTCGACAGCTCAACCTTTATGGATTTAGTAAAATTCAACAG 225
Query 445 AATTTTCAAAGATCTGCCTTTCTAGCCACCTTTCTGTCAGAAGAGAAAGAATCGTCTGTCTTAAGCAAGCTTCA 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||.|
Sbjct 226 AATTTTCAAAGATCTGCCTTTCTAGCCACCTTTCTGTCAGAAGAGAAAGAATCGTCTGTCTTAAGCAAG-TTAA 298
Query 519 TG-TCT-TTGT-------GTTTCACCACAGT--CTAT-------TTGGAGCAACATTCG--GAGAA-CATCACT 571
.| ||| ||.| .||||| |..|| |||| ||..||.||.|.| | ||||| .||...|
Sbjct 299 AGTTCTATTATAATCCAAATTTCA--AGCGTGGCTATCCCCAACTTTTAGTAAGAGT-GAAGAGAAGAATTGGT 369
Query 572 TTCAGCCATGCCCTTTACC---ATCTGGT------AAC-AAGGCTCCCATTTCTAC----------TTGGAG-- 623
.|.|...||| |||.||| ||||..| ||| ||| |||||.|| ||.|||
Sbjct 370 GTTAAAAATG--CTTCACCTATATCTACTTTATTCAACGAAG------ATTTCAACAAGAAGCATTTTAGAGCA 435
Query 624 ----------TGGAGATTC------CTG-----GTTGCTG---------------------------------- 642
||||||.|| ||| |.|||||
Sbjct 436 GGGGCTAACATGGAGAATCATAATTCTGCCTTAGCTGCTGAAGCTAGTGAAGAAAGTTTATTTTCAGCCTCTAA 509
Query 643 -------------------------------------------------------------------------- 642
Sbjct 510 AAATTTAAATATGCCTCTAACAAGGGAATCTTCTGTCAGACAGATAATTGCAAATTCATCTGTCCCCATTAGAA 583
Query 643 -------------------------------------------------------------------------- 642
Sbjct 584 GTGGTTTCCCTCCTCCTTCACCTTCAACCTCAGTTGGACCATCAGAACAAATTGCAACAGATCAACATGCTATT 657
Query 643 -------------------------------------------------------------------------- 642
Sbjct 658 TTAAATCAGTTGACCACTATTCATATGCACTCTCATAGTACCTACATGCAAGCAAGGGGCCACATTGTGAATTT 731
Query 643 -------------------------------------------------------------------------- 642
Sbjct 732 TATTACAACCACAACTTCTCAATACCACATCATATCTCCCTTACAAAATGGTTATTTTGGGCTGACAGTGGAAC 805
Query 643 -------------------------------------------------------------------------- 642
Sbjct 806 CATCTGCTGTTCCCACACGATATCCTCTGGTATCAGTCAATGAGGCTCCATATCGTAACATGCTACCAGCAGGC 879
Query 643 -------------------------------------------------------------------------- 642
Sbjct 880 AACCCGTGGTTGCAAATGCCTACGATCGCTGATAGATCAGCTGCCCCTCATTCCAGGCTAGCTCTTCAACCATC 953
Query 643 ------------------------------- 642
Sbjct 954 ACCACTGGACAAATATCACCCTAATTACAAC 984
