Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10539
Subject:
NR_026972.1
Aligned Length:
1920
Identities:
325
Gaps:
1563

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AGGAAATTTCTGGTGGGCCTTCGCGGCTCCGCTGGGTTGGCAGCCGCTTGAGCCACTGCGAGGAAAGCAAAGTC  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  TGGGCCATGGAGATGAGCCTAGTCCTGCTGTTCCTGATCCGCACTGCCCTTTTTGCACCCCAGGGAGCTGCTGC  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  TGACGGCGCCTCCCTCTGTCGCCAAAGTTGGAGTGCAGTGGCGCGGTCTCGGCTCACTGCAAGCTCCGCCTCCC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GGATTCAAGTGATTCCCCTGCCTTAGCCTCCTAAGTAGCTGGGATTACAAGTGCCCACCACCACACCCGGCTAA  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  TATTTTGTATTTTAATAGAGACTGGGTTTCACCATGTTGACCGGGATGGTCTCAATCTCCTGACCTCGTGATCT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GCCTGCCTAAGCCTCCCGAAGTGCTGGGATTACAGGCGTGAGCCACCACACCTAGCTGGAAGAGGAGATAAATA  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TATGAAGGTGCTGTTTGGCACAGAATTTAATAGGGAAGAAAGAGACAGTATAACTCACCAGTGCTGGGTCTCAT  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CATCCTGCAATTTCAGAACAACTATGAATACAAAAAGAATTTTAAAATCCCAGTCCTGCCTAGAAAGGGGAAGT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  CATCTCTAAATATGGTGGCCCTGGGGCAGCTGGCCTCCCTGCCAGGCCTCTTCCATGGGGGCCCTTTCTGCAGT  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GACTGTGGTTTCTTCCCATTTTACTCTGTCCTGTGTCCTGACTGAAGCGACAAGGTGTGTCTGCAGCTGTGCTC  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  ACACCTGGAGGAAACCTCAATGGTCACATCCTCTTTCCTGTGTCAAGAAGCATCGTCCGGGGAGGTGAGAAGAA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  GACAGTCCTCCCTAGAATTGAAGAACCAGGGAGAACCAGATGGGCTGGGCAGGTGGGTTTTCACCTGGAACCTG  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GAGGATGAGCAATGACATCTCTCCACCCTGAGCTCAGCCCCGGCATCCACCTCCTGGGCTCATGAGCAGTGCAG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  TGGTGCCTCCTAGTGGTCTCTGCTCTTCCTTTTCCAGATCAAGCACAAACCTGAGATCCAACTGTCCCTCTTAT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  GCGCCTGGGTTTCTTCACTGGACACCAGTATGAGTCAACTTTCCTGTAAAGCAGAACAAGCACGAGATTGGACC  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  ATGTTAGAGGAGGAATGGTGTCATCTCCACTTCTGGAGAGATCACTGTCCCCGTGTTTGGGGGAAGGACCAAGC  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  CTCACTCCCATGCAGAGAAGAAGCTCTGACTGTAACTGCACCTGTGGAGAGAGGATTGCGGCCTGTTGGCAGAA  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  GAGTAGTGTCTTGGGCCCCAGCTGACCTGATGAATATCAACATCCAATGCCCTGTAATGAAGTCATGTGTGCAC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  ATATCATCACTTCTGCATGCAGTCTCATGGGAAGATGGTGCCAAGAACGAAGAAGGAAGCTCCTGCCCCTCCTA  1406

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1407  AAGCCGAAGCCAAAGCGAAGGCTTTGCAAGGCCAAGAAGGCAGTGTTGAAAGATGTCCACAGCCACAAAAAAAA  1480

Query    1  ----------ATGTCACTCACCTTCAGGCGGCCCAAGACACTGCGACTCCGGAGGCAGCCCAGATATCCTCAGA  64
                      |||||||.|||||||.|||||||||||||||||.||||||||||||||||||.|||||||..||
Sbjct 1481  CAAGATCCACATGTCACCCACCTTCCGGCGGCCCAAGACACTGTGACTCCGGAGGCAGCCCAAATATCCTTGGA  1554

Query   65  AGAGCACCCCCAGGAGAAACAAGCTTGGCCACTATGCTATCATCAAGTTTCCGCTGACCACTGAGTCGGCCGTG  138
            |||||||||||||||||||.|||||||.||||.|||.|||||||||||||||||||||||||||||.|||.|||
Sbjct 1555  AGAGCACCCCCAGGAGAAATAAGCTTGACCACCATGTTATCATCAAGTTTCCGCTGACCACTGAGTAGGCTGTG  1628

Query  139  AAGAAGATAGAAGAAAACAACACG----CTTGTGTTCACTGTGGATGTTAAAGCCAACAAGCACCAGATCAGAC  208
            ||||||||   ||||||||||| |    |||||||||||||||||||||||||||||||||||||||||||.||
Sbjct 1629  AAGAAGAT---AGAAAACAACA-GCCTACTTGTGTTCACTGTGGATGTTAAAGCCAACAAGCACCAGATCAAAC  1698

Query  209  AGGCTGTGAAGAAGCTCTATGACAGTGATGTGGCCAAGGTCACCACCCTGATT-TGTCCTGATAAAGAGAAGAA  281
            |||||||||||||| |.|.|||||.||||||||||||.||||.|||.|||||| .|| |||||..|||||.|||
Sbjct 1699  AGGCTGTGAAGAAG-TTTGTGACATTGATGTGGCCAAAGTCAACACTCTGATTCAGT-CTGATGGAGAGAGGAA  1770

Query  282  GGCATATGTTCGACTTGCTCCTGATTATGATGCTTTCAATGTTG-TAACAAAATTGGGATCACCTAAACTGAGT  354
            |||||||||||||||.||||||||.||.||||||||...||||| .|.||||||||||||||||||||||||||
Sbjct 1771  GGCATATGTTCGACTGGCTCCTGACTACGATGCTTTGGTTGTTGCCACCAAAATTGGGATCACCTAAACTGAGT  1844

Query  355  CCAGCTGGC-------------------------------------------------------------  363
            |.|||||||                                                             
Sbjct 1845  CAAGCTGGCTAGTTCCAAATATATGTATATCTTTTCACCATTAAAAGAATCTTAATCTCTCAAAAAAAAA  1914

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.