Nucleotide Global Alignment

Description

• Query: ccsbBroad304_10600
• Subject: NM_000224.3
• Aligned Length: 1402
• Identities: 598
• Gaps: 737

Alignment

Query    1  ATGGATCATTGCTTAATTTCGGGTCTTAGCCAGTTAGATTTACCTTCAGCTTTAACAAAAAATTGGCCGTCAAA  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  ACCTGAGTCCTGTCCTCTTGCTCTCCTCCCCGGACAGCATGAACTTCACCACTTGCTCCACCCTCTCCACCAAC  148
                                                  ||||.||||||||||.||||||||.|||||||||||
Sbjct    1  --------------------------------------ATGAGCTTCACCACTCGCTCCACCTTCTCCACCAAC  36

Query  149  TACCAGTCCCTGGGCACTGTCCAGGCACCCAGCTA-TGTGCCCAGCTGGTCAGCAGTGTGGCCAGTGTCTATGC  221
            ||||.||||||||||.||||||||||.|||||||| .|.||||.||.|||||||||.|.||||||.||||||||
Sbjct   37  TACCGGTCCCTGGGCTCTGTCCAGGCGCCCAGCTACGGCGCCCGGCCGGTCAGCAGCGCGGCCAGCGTCTATGC  110

Query  222  AGGCATCAGGGGCTCTGGTTCCCGGATCTCCATGTCCTGCTTCACCAGCTTCCAGGGCAGCATGGGGTCCAGGG  295
            ||||....|||||||||||||||||||||||.|||||.|||.||||||||||..||||.|||||||||||.|||
Sbjct  111  AGGCGCTGGGGGCTCTGGTTCCCGGATCTCCGTGTCCCGCTCCACCAGCTTCAGGGGCGGCATGGGGTCCGGGG  184

Query  296  GCCTGCCCGCAGTGATGGCCGGGGGTCTGGCAGGAATGGGAGTCATCCAGAATGAGAAGGAAACCATGCAAAGC  369
            |||||.||.|.|.|||.|||||||||||||||||||||||||.|||||||||.||||||||.||||||||||||
Sbjct  185  GCCTGGCCACCGGGATAGCCGGGGGTCTGGCAGGAATGGGAGGCATCCAGAACGAGAAGGAGACCATGCAAAGC  258

Query  370  CTCAACGACCACCTGGCCTCCTACCTGGACAGAGTTAGGAGCCTGGATACCAAGAACTGGAAGCTGGAGAG---  440
            ||.|||||||.|||||||||.||||||||||||||.|||||||||||.|||.|||||.|||.|||||||||   
Sbjct  259  CTGAACGACCGCCTGGCCTCTTACCTGGACAGAGTGAGGAGCCTGGAGACCGAGAACCGGAGGCTGGAGAGCAA  332

Query  441  ---CCAGGAGCACCTGGAGAAGAAGGGACCCCAGGTCAGAGACTGGAGCCATGACTTCAAGACCATCGAGAACC  511
               ||.|||||||.||||||||||||||||||||||||||||||||||||||.|||||||||.|||||||.|||
Sbjct  333  AATCCGGGAGCACTTGGAGAAGAAGGGACCCCAGGTCAGAGACTGGAGCCATTACTTCAAGATCATCGAGGACC  406

Query  512  TGAGGGCTCAGATCTTTGCAAATACTGTGGACAGTGCCCACATTGTTCTGCAGATCGACAATGCCTGTCTTGCT  585
            ||||||||||||||||.||||||||||||||||.|||||.|||.|||||||||||.|||||||||.||||||||
Sbjct  407  TGAGGGCTCAGATCTTCGCAAATACTGTGGACAATGCCCGCATCGTTCTGCAGATTGACAATGCCCGTCTTGCT  480

Query  586  GGTGATGACTTTAGGGTCAAGTATGAGACAGAGCTGGCCATGTGCCAGTCTGTGGAGAGTGACATCCATGGGCT  659
            |.||||||||||||.|||||||||||||||||||||||||||.|||||||||||||||..||||||||||||||
Sbjct  481  GCTGATGACTTTAGAGTCAAGTATGAGACAGAGCTGGCCATGCGCCAGTCTGTGGAGAACGACATCCATGGGCT  554

Query  660  CCACAAGGTCATTGATGACACCAATGTCACTTGGCTGCAGCTGGAAGCAGAGATCAAGGCTCTCAAGGAGAAGC  733
            ||.||||||||||||||||||||||.||||..|.|||||||||||..||||||||.||||||||||||||.|||
Sbjct  555  CCGCAAGGTCATTGATGACACCAATATCACACGACTGCAGCTGGAGACAGAGATCGAGGCTCTCAAGGAGGAGC  628

Query  734  TGCTCTTCATGAAGAAGAACCATGAAGAGGAAGTAAAGGGCCTA------------------------------  777
            ||||||||||||||||||||||.||||||||||||||.||||||                              
Sbjct  629  TGCTCTTCATGAAGAAGAACCACGAAGAGGAAGTAAAAGGCCTACAAGCCCAGATTGCCAGCTCTGGGTTGACC  702

Query  778  --------------------------------------------------------------------------  777
                                                                                      
Sbjct  703  GTGGAGGTAGATGCCCCCAAATCTCAGGACCTCGCCAAGATCATGGCAGACATCCGGGCCCAATATGACGAGCT  776

Query  778  --------------------------------------------------------------------------  777
                                                                                      
Sbjct  777  GGCTCGGAAGAACCGAGAGGAGCTAGACAAGTACTGGTCTCAGCAGATTGAGGAGAGCACCACAGTGGTCACCA  850

Query  778  --------------------------------------------------------------------------  777
                                                                                      
Sbjct  851  CACAGTCTGCTGAGGTTGGAGCTGCTGAGACGACGCTCACAGAGCTGAGACGTACAGTCCAGTCCTTGGAGATC  924

Query  778  --------------------------------------------------------------------------  777
                                                                                      
Sbjct  925  GACCTGGACTCCATGAGAAATCTGAAGGCCAGCTTGGAGAACAGCCTGAGGGAGGTGGAGGCCCGCTACGCCCT  998

Query  778  --------------------------------------------------------------------------  777
                                                                                      
Sbjct  999  ACAGATGGAGCAGCTCAACGGGATCCTGCTGCACCTTGAGTCAGAGCTGGCACAGACCCGGGCAGAGGGACAGC  1072

Query  778  --------------------------------------------------------------------------  777
                                                                                      
Sbjct 1073  GCCAGGCCCAGGAGTATGAGGCCCTGCTGAACATCAAGGTCAAGCTGGAGGCTGAGATCGCCACCTACCGCCGC  1146

Query  778  --------------------------------------------------------------------------  777
                                                                                      
Sbjct 1147  CTGCTGGAAGATGGCGAGGACTTTAATCTTGGTGATGCCTTGGACAGCAGCAACTCCATGCAAACCATCCAAAA  1220

Query  778  ----------------------------------------------------------------------  777
                                                                                  
Sbjct 1221  GACCACCACCCGCCGGATAGTGGATGGCAAAGTGGTGTCTGAGACCAATGACACCAAAGTTCTGAGGCAT  1290