Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10609
- Subject:
- XM_011542012.2
- Aligned Length:
- 1984
- Identities:
- 899
- Gaps:
- 1070
Alignment
Query 1 ATGTGTTTGGGTTTCTTCTCCCCA----------GTCCCTGGCTCTACCTCTTCTGCCACAAACGTCAGCATGG 64
||| ||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATG-GTT---------------CAGCAGGACGAGGTCCCTGGCTCTACCTCTTCTGCCACAAACGTCAGCATGG 58
Query 65 TGGTATCTGCCGACCCTTTGTCCAGCGAGAGGGCAGAGATGAACATCCTAGAAATCAACCAGGAATTGCGCTCC 138
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.
Sbjct 59 TGGTATCTGCCGACCCTTTGTCCAGCGAGAGGGCAGAGATGAACATCCTAGAAATCAACCAGGAATTGCGCTCG 132
Query 139 CAGCTGGCAGAGAGCAATCAGCAGTTCCGAGACCTCAAAGAGAAATTCCTTATATCTCAAGCTACTGCCTACTC 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||
Sbjct 133 CAGCTGGCAGAGAGCAATCAGCAGTTCCGAGACCTCAAAGAGAAATTCCTTATAACTCAAGCTACTGCCTACTC 206
Query 213 CCTGGCCAACCAGCTGAAGAAATACA------------------------------------------------ 238
||||||||||||||||||||||||||
Sbjct 207 CCTGGCCAACCAGCTGAAGAAATACAAGTGTGAAGAGTACAAAGACATCATAGACTCTGTGCTGAGGGATGAAC 280
Query 239 -------------------------------------------------------------------------- 238
Sbjct 281 TGCAGTCCATGGAGAAGCTGGCAGAGAAGCTCAGGCAAGCTGAGGAGCTCAGGCAGTATAAAGCCCTGGTTCAC 354
Query 239 -------------------------------------------------------------------------- 238
Sbjct 355 TCTCAGGCAAAAGAGCTGACCCAGTTACGGGAGAAGTTACGGGAAGGGAGAGATGCCTCCCGCTGGCTGAACAA 428
Query 239 -------------------------------------------------------------------------- 238
Sbjct 429 GCATCTGAAAACCCTCCTCACTCCTGATGACCCTGACAAGTCCCAGGGTCAGGACCTCCGAGAGCAGCTGGCTG 502
Query 239 -------------------------------------------------------------------------- 238
Sbjct 503 AGGGGCACAGGCTGGCAGAGCACCTTGTTCACAAGCTGAGCCCAGAAAATGATGAAGATGAAGATGAGGATGAA 576
Query 239 -------------------------------------------------------------------------- 238
Sbjct 577 GACGACAAAGACGAGGAGGTTGAGAAAGTACAGGAATCACCTGCCCCCAGAGAGGTGCAGAAGACTGAAGAAAA 650
Query 239 -------------------------------------------------------------------------- 238
Sbjct 651 GGAAGTCCCTCAGGACTCACTGGAGGAATGTGCTGTCACTTGTTCAAATAGTCACAACCCTTCTAACTCCAACC 724
Query 239 -------------------------------------------------------------------------- 238
Sbjct 725 AGCCTCACAGGAGCACCAAAATCACATTTAAGGAACACGAAGTCGACTCTGCTCTGGTTGTAGAGAGTGAACAC 798
Query 239 -------------------------------------------------------------------------- 238
Sbjct 799 CCTCATGATGAAGAGGAGGAAGCTCTAAACATTCCCCCAGAAAATCAAAATGACCATGAGGAGGAGGAGGGGAA 872
Query 239 -------------------------------------------------------------------------- 238
Sbjct 873 AGCGCCAGTGCCCCCCAGACACCATGACAAGTCCAACTCTTACCGGCATCGTGAAGTCTCTTTCTTGGCATTGG 946
Query 239 -------------------------------------------------------------------------- 238
Sbjct 947 ATGAACAGAAAGTTTGCTCCGCTCAGGATGTTGCCAGGGATTACTCCAATCCCAAATGGGATGAAACCTCACTT 1020
Query 239 ----------AAAAGCAAAATGATCTTGAAGAGGTGAAAGGACAAGAAACAGTTGCTCCCAGGCTCAGCAGGGG 302
|||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1021 GGCTTCCTCGAAAAGCAAAGTGATCTTGAAGAGGTGAAAGGACAAGAAACAGTTGCTCCCAGGCTCAGCAGGGG 1094
Query 303 ACCACTGAGAGTAGACAAGTATGAAATCCCCCAGGAGTCACTGGATGGATGTTGCTTGACTCCTTCCATCCTTC 376
|||.||||||||.||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1095 ACCGCTGAGAGTGGACAAGCATGAAATCCCCCAGGAGTCACTGGATGGATGTTGCTTGACTCCTTCCATCCTTC 1168
Query 377 CTGACCTGACTCCCTCCTACCACCCTTATTGGAGCACTTTGTACTCTTTTGAAGACAAGCAAGTCAGCTTGGCT 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1169 CTGACCTGACTCCCTCCTACCACCCTTATTGGAGCACTTTGTACTCTTTTGAAGACAAGCAAGTCAGCTTGGCT 1242
Query 451 CTTGTAGACAAAATTAAAAAGGATCAAGAGGAGGTAGAAGACCAAAGCCCACCATGCCCCAGGCTCAGCCAGGA 524
|||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||
Sbjct 1243 CTTGTAGACAAAATTAAAAAGGATCAAGAGGAGATAGAAGACCAAAGCCCACCATGCCCCAGGCTCAGCCAGGA 1316
Query 525 GCGGCCAGAGGTGAAGGAGCAGGAAGTCCCAGAGGACTCCGTGAATGAAGTTTACTTGACTCCCTCAGTTCACC 598
||.||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||
Sbjct 1317 GCTGCCAGAGGTGAAGGAGCAGGAAGTCCCAGAGGACTCTGTGAATGAAGTTTACTTGACTCCCTCAGTTCACC 1390
Query 599 ATGATGTGTCTGACTGCCACCAGCCTTATAGCAGCACCTTGTCCTCATTGGAGGATCAGCTTGCCTGCTCTGCT 672
||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1391 ATGACGTGTCTGACTGCCACCAGCCTTATAGCAGCACCTTGTCCTCATTGGAGGATCAGCTTGCCTGCTCTGCT 1464
Query 673 CTGGATGTAGCCTCCCCCACCGAGGCGGCCTGTCCCCAAGGGACTTGGAGTGGAGACTTGAGCCACCACCGGTC 746
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1465 CTGGATGTAGCCTCCCCCACCGAGGCGGCCTGTCCCCAAGGGACTTGGAGTGGAGACTTGAGCCACCACCGGTC 1538
Query 747 AGAGGTTCAAATTTCACAGGCACAGCTGGAACCAAGCACCCTGGTGCCCAATTGTCTGCGACTACAGCTGGATC 820
||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||
Sbjct 1539 AGAGGTTCAAATTTCACAGGCACAGCTGGAACCAAGCACCCTGGTGCCCAGTTGTCTGCGACTACAGCTGGATC 1612
Query 821 AAGGGTTCCACTGTGGGAACGGCTTGCCCCAGCGGGGCCTTTCCTCCATGACCCGCAGCTTCTCAGCCAATGCT 894
||||||||||||||||||||||||||.|||||||||||||||||||||..|||.||||||||||||||||||||
Sbjct 1613 AAGGGTTCCACTGTGGGAACGGCTTGGCCCAGCGGGGCCTTTCCTCCACCACCTGCAGCTTCTCAGCCAATGCT 1686
Query 895 GAT--------------------------------------------TCTGGGGATGAAGAACCCTCCCCAGCT 924
||| |||||||||||||||||||||||||||
Sbjct 1687 GATTCTGGGAACCAATGGCCCTTCCAAGAGCTGGTTTTAGAGCCCTCTCTGGGGATGAAGAACCCTCCCCAGCT 1760
Query 925 GGAAGA-------------------------------------------------------------------- 930
||||||
Sbjct 1761 GGAAGATGATGCACTTGAAGGCTCAGCAAGCAACACACAAGGGCGTCAAGTCACTGGCCGGATTCGTGCCTCCC 1834
Query 931 -------------------------------------------------------------------------- 930
Sbjct 1835 TTGTCCTGATACTGAAGACCATCAGAAGAAGACTCCCGTTCAGCAAGTGGAGACTGGCATTCAGATTCGCTGGC 1908
Query 931 ------------------------------------------------------------ 930
Sbjct 1909 CCGCATGCTGAGAGTGCAGAGATACCAAATACTGCTGAAAGGATGCAAAGGATGATAGGA 1968
