Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10614
- Subject:
- NM_001080435.3
- Aligned Length:
- 2439
- Identities:
- 363
- Gaps:
- 2061
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGGACGAGCAGCCTGACAGCCTGGAGGGCTGGGTGCCGGTCCGGGAGGGCCTCTTCGCCGAGCCCGAGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCACCGGCTGCGCTTCCTGGTGGCCTGGAACGGCGCGGAGGGCAAGTTCGCTGTGACTTGTCACGACCGTACCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGCAGCAGCGGCGGCTGCGCGAGGGGGCCCGGTTGGGGCCCGAGCCCGAGCCCAAGCCTGAGGCCGCCGTCTCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCGTCCAGCTGGGCCGGCCTGCTCTCGGCCGCGGGGCTCCGCGGCGCGCACCGGCAGTTGGCGGCGCTGTGGCC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCTCTGGAGCGCTGCTTCCCGCGGCTGCCGCCGGAGCTGGACGTGGGCGGCGGCGGGGCCTGGGGTCTGGGGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TCGGGCTGTGGGCGCTGCTGTGGCCGACGCGCGCGGGTCCCGGCGAGGCGGCGCTGCAGGAGCTGTGCGGGCAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CTGGAACGCTATCTGGGCGCGGCGGCCGACGGCTGCGGCGGCGCCACAGTGCGCGACGCACTCTTCCCGGCTGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 GGGCGGCGCGGCCGACTGCGAAAGCCCGCGCGAGTTCCGGGAGCGGGCCTTGCGCGCGCGGTGGGTCGAGGCGG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACGCGCGGCTGCGCCAGGTTATTCAAGGACACGGAAAAGCCAACACCATGGTAGCATTAATGAACGTTTACCAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAGGAAGATGAAGCATACCAGGAATTGGTTACCGTGGCAACCATGTTCTTCCAGTACTTATTGCAGCCATTTAG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGCTATGCGAGAAGTTGCAACTTTATGTAAGCTTGATATTTTGAAGTCTTTGGATGAGGATGACCTAGGTCCTA 814
Query 1 --------------------------------------------------------------------AT---G 3
|| |
Sbjct 815 GAAGGGTAGTTGCCCTGGAGAAAGAAGCTGAAGAATGGACCAGACGGGCTGAAGAAGCTGTCGTCTCTATTCAG 888
Query 4 GA-AGCA-AGTGTGCCAAAATA---TAAG----------AAGCACTTGCCTCAACTAGGAATGCAGAAAGAAAT 62
|| |.|| |||| ||.|| |||| |||||.|.|| ||||||||||||||||||
Sbjct 889 GATATCACAGTG-----AATTATTTTAAGGAGACAGTAAAAGCATTAGC-------AGGAATGCAGAAAGAAAT 950
Query 63 GGAACAGGATGTGAAGAGATTTGGCCAGGCTGCCTGGGCCACAGCAATTCCCAGGTTGGAAAAACTTAAGCTAA 136
|||||||||||.||||||||||||.||||||||||||||||||||||||||||||||||||||||||.||||||
Sbjct 951 GGAACAGGATGCGAAGAGATTTGGTCAGGCTGCCTGGGCCACAGCAATTCCCAGGTTGGAAAAACTTCAGCTAA 1024
Query 137 TGCTAGCTCAAGAGACTCTGCAACTCATGAGAGCGAAAGAGTTATGTTTAAATCACAAAAGAGCTGAAATTCAG 210
|||||||||.|||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 1025 TGCTAGCTCGAGAGACTCTGCAACTCATGAGAGCGAAAGAGTTGTGTTTAAATCACAAAAGAGCTGAAATTCAG 1098
Query 211 GGAAAGATGGAAGATCTTCCAGAACAAGAAAAAAATATAAATGTTGTAGATGAATTAGCAATACAATTTTATGA 284
|||||||||||||||||||||||||||||||||||||.||||||||||||||||||||.|||||||||||||||
Sbjct 1099 GGAAAGATGGAAGATCTTCCAGAACAAGAAAAAAATACAAATGTTGTAGATGAATTAGAAATACAATTTTATGA 1172
Query 285 AATTCAGTTAGAACTATATGAAGTTAAATTTGAGATATTAAAAAACAAAGAAATACTGCTTACTACACAGTTGG 358
||||||.|||||||||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
Sbjct 1173 AATTCAATTAGAACTATATGAAGTTAAATTTGAGATATTAAAAAACGAAGAAATACTGCTTACTACACAGTTGG 1246
Query 359 ACTCTCTTGAAAGACTTATAA---------AAGATGAAATT--------------------------------- 390
||||||||.|||||||||||| ||||||||.||
Sbjct 1247 ACTCTCTTAAAAGACTTATAAAAGAAAAACAAGATGAAGTTGTCTATTACGATCCATGTGAAAATCCAGAGGAA 1320
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1321 CTTAAAGTCATTGACTGTGTGGTGGGGCTGCAGGATGATAAGAATTTGGAAGTGAAAGAACTCAGAAGGCAGTG 1394
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1395 CCAGCAGCTGGAGTCTAAACGGGGCAGGATCTGTGCCAAAAGAGCCTCTCTCCGGAGTAGAAAGGATCAGTGCA 1468
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1469 AAGAAAATCATCGGTTCAGATTGCAACAGGCTGAAGAAAGCATAAGATACTCTCGTCAGCATCACAGTATTCAG 1542
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1543 ATGAAAAGAGACAAGATAAAAGAAGAGGAGCAAAAGAAAAAAGAATGGATCAACCAAGAACGTCAAAAAACACT 1616
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1617 CCAACGATTGAGATCATTTAAAGATAAACGCCTAGCTCAATCTGTCCGAAACACCTCTGGCTCAGAACCTGTGG 1690
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1691 CTCCAAACCTGCCAAGTGATCTTTCCCAGCAGATGTGCTTGCCAGCTTCCCACGCGGTGTCAGTAATTCACCCG 1764
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1765 TCCTCTAGGAAAACTAGAGGTGTTCCCCTATCGGAAGCTGGTAATGTGAAAAGCCCCAAGTGTCAAAACTGTCA 1838
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1839 TGGAAATATCCCTGTCCAGGTTTTTGTTCCAGTTGGTGATCAAACACATTCCAAATCCAGTGAGGAATTGTCAC 1912
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1913 TGCCACCACCTCCTCCTCCTCCACCACCACCACCGCCGCCACCGCCGCCCCCACCCCCTCCTCTCCGTGCTCTG 1986
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1987 TCCTCATCCTCTCAAGCTGCAACTCATCAGAACTTAGGCTTCCGGGCTCCAGTGAAAGATGACCAGCCACGTCC 2060
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2061 TCTAGTGTGCGAATCACCTGCTGAGCGACCACGTGACTCCTTGGAAAGTTTTTCATGTCCAGGATCTATGGATG 2134
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2135 AAGTGTTGGCCTCCTTAAGGCATGGCAGAGCTCCTCTCCGGAAGGTGGAAGTGCCGGCGGTGCGCCCTCCCCAC 2208
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2209 GCCTCAATCAATGAGCACATTCTGGCTGCCATAAGGCAAGGGGTCAAACTGAAGAAAGTTCACCCTGATCTTGG 2282
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2283 CCCAAACCCCAGCAGCAAACCAACCAGCAACAGACGCACCAGTGACCTTGAGAGGAGCATCAAGGCTGCGCTCC 2356
Query 391 ----------------------------------------------------------------------- 390
Sbjct 2357 AGAGAATCAAGAGGGTGTCTGCTGACTCTGAGGAGGACAGTGATGAGCAGGACCCTGGCCAGTGGGATGGT 2427
