Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10614
- Subject:
- NR_003521.1
- Aligned Length:
- 3589
- Identities:
- 390
- Gaps:
- 3199
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTGTGGCCGGCGCGCGTGGGCCCCGGCGAGGCGGCACTGCAGGAGCTTTGCGGGCAGCTGGAGCGCTACCTGGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CGCGGCGGCCCACGGCTGTGGCTGCGCCACCGTGCGCGACGCTCTCTTCGCGGCTAACGGCCGCGCGGCCGACT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCGAGAGCCCGCGCGAGTTTCGGGAGCGGGCCCTGCGCGCCTGATGGGTCGAGGCGGACGCGCGGCTGCGTCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTAAGCGAGGCCGGGCCGCCGGCGTTTGACCGCGCTTGGGTGGCCTGGGACCCGGTGGGAGGCTTCCCCGGCGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CGAGAGCCCTGGCTGACGGCTGATGGGGAGGAGCCGGCGGGCGGAGAAGGCCACGGGCTCCCCAGTACCCTCAC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGCGCGGGATCGCTGCGGGAAACCAGCGGGAGCTTCGGCAGGGCCTGCAGAGAGGACAAGCGAAGTTAGAGCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TAGTGTACTTGCCGCTGGGAGCTGGGCTAGGCCCCCAACCTTTGCCCTGAAGATGCTGGCAGAGCAGGATGTTG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TAACGGGAAATGCCAGAAATACTGCAAGCAAAACTGAAAACAACCCATCCATGTAGGAAAGAATAACACGGACT 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 ACACGTTATTCAAGGACACCGAAAAGCCAACACCATGGTAGCATTAATGAAAGTTTACCAAGAGGAAGATGAAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CCTACCAGGAATTAGTTACCGTGGCAACCACGTTCTTCCAGTACTTACTGCAGCCATTTAGGGCTATGCGAGAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GTTGCAACTTTATAAGTCCTTGGATGAGGATGACCTAGGTCCTAGAAGGGTAGTTGCCCTGGAGAAAGAAGCTG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 AAGAATGGACCAGACGGGCTGGAGAAGCTGTCGTCTCTATTCAAGATATCACAGTGAATTATTTTAAGGAGACA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GTAAAAGCATTAGCAGGAGTTTCTGATATATTGCACAGAATCAACAAGATATAAAGCAGAATGATGATCCTGGT 962
Query 1 -------------------------------------------------------ATGGAAGCAAGTGTGCCAA 19
|||||||||||||||||||
Sbjct 963 TTTTTGGTCAAACTATCCATATGAGCCTGTCTGTCTAGCTAGTCATAGAAACAATATGGAAGCAAGTGTGCCAA 1036
Query 20 AATATAAGAAGCACTTGCCTCAACTAGGAATGCAGAAAGAAATGGAACAGGATGTGAAGAGATTTGGCCAGGCT 93
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 AATATAAGAAGCACTTGCCTCAACTAGGAATGCAGAAAGAAATGGAACAGGATGTGAAGAGATTTGGCCAGGCT 1110
Query 94 GCCTGGGCCACAGCAATTCCCAGGTTGGAAAAACTTAAGCTAATGCTAGCTCAAGAGACTCTGCAACTCATGAG 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GCCTGGGCCACAGCAATTCCCAGGTTGGAAAAACTTAAGCTAATGCTAGCTCAAGAGACTCTGCAACTCATGAG 1184
Query 168 AGCGAAAGAGTTATGTTTAAATCACAAAAGAGCTGAAATTCAGGGAAAGATGGAAGATCTTCCAGAACAAGAAA 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 AGCGAAAGAGTTATGTTTAAATCACAAAAGAGCTGAAATTCAGGGAAAGATGGAAGATCTTCCAGAACAAGAAA 1258
Query 242 AAAATATAAATGTTGTAGATGAATTAGCAATACAATTTTATGAAATTCAGTTAGAACTATATGAAGTTAAATTT 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 AAAATATAAATGTTGTAGATGAATTAGCAATACAATTTTATGAAATTCAGTTAGAACTATATGAAGTTAAATTT 1332
Query 316 GAGATATTAAAAAACAAAGAAATACTGCTTACTACACAGTTGGACTCTCTTGAAAGACTTATAAAAGATGAAAT 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 GAGATATTAAAAAACAAAGAAATACTGCTTACTACACAGTTGGACTCTCTTGAAAGACTTATAAAAGATGAAAT 1406
Query 390 T------------------------------------------------------------------------- 390
|
Sbjct 1407 TTAGAATCAAGTTCAAAACAAAAAACTCTTTGGAATTTTGATTGTGATTTTGCTTAAAATTAGAGATTACTTTG 1480
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1481 GGGAGAATAGTGGTCTTTGCAATTTTGAATCTTCCTACCCAAGAACATGAAAAACAGGATGAAGTTGTCTATTA 1554
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1555 CGATCCATGTGAAAGTCCAGAGGAACTTAGTCATTGACTGTGGTGGGGCTGCAGGACGATAAGAATTCGGAAGT 1628
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1629 GAAAGAACTCAGAAGGCAGTGCCAGCAGCTGGAGTCTATTAAACGGGGCAGGATCTGTGTCAAAAGAGCTTCTC 1702
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1703 TCCAGAGTAGAAAGGATCAGTGCGAAGAAAATCATTGGCTCAGATTGCAACAGGCTGAAGAAAGCATAAGATAT 1776
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1777 TCTCGTCAGCATCACAGTATTCAGATGAAAAGAGACAAGATAAAAAGGAGCAAAAGAAAAAAGAATGGATCAAC 1850
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1851 CAAGAACGTCAAACACTCCAACAATTGAGAGCATTTAAAGATAGAAATAATGAGAGAGATTGTCTGTCTTGAAG 1924
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1925 TTCTCAGTGCCTGTGCATTGCTGCCACTACACAGCTAGTATCATGACAGCAGCTTCAGAACCAGAGCTGGCTTC 1998
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1999 CAGGCAAGGCTGGGTGGGGAAGAAAGAGAAAAACAAAAGAATTATTTCTCTATGCCGAGACCAGCTCGGTCAGG 2072
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2073 GAGACCCTAACCTAGCGGTGCTAGAGGAATTAAAGACATAGACACAGAAATATAGAGGTGTGAAGTGGGAAATC 2146
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2147 AGGGGTCTCACAGCCTTCAGAGCTCAGCCACGAACAGAGATTTACCCACGTATTTATTAACAGCAAGCCAGTCA 2220
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2221 TTAGCATTGTTTCTATAGATATTAAATTAACTAAACGTATCCCTTATGGGAAACGAAGGGAGGGGCCGAATTAA 2294
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2295 AGGAATAGGTTGGGCTAGTTAACTGCAGCAGGAGCATGTCCTTAAGGCACAGATCGCTCATGCTATTGTTTGTG 2368
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2369 GCTTAAGAATGCCTTTAAGCGGTTTTCCACCCCGGGCAGGCCAGGTGTTCCTTGCCCTCATTCCAGTAAACCCA 2442
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2443 CAACCTTCCAGCATGGGTGTTAGGGCCATTATGAACATGTTACAGTGCTGCAGAGATTTTATTTATGGCCAGTT 2516
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2517 TATGGCCAGATTTTGGGGGGCCTGCTCCCAACACTCTACATATGCTCCATCTTGCAGAGGCTTCATTCTTGGTT 2590
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2591 CTCTAGCTAAAAACAGTAGAAATTTTGCACACCTGGGTTAGAAAAAAAAATAGCCATTAAACCCACCCCTGTTA 2664
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2665 CAGGTCACTATTGGTATTTTGATTTTGCCTTCAATCCATCTGTTATTGTTTACTTTTAAGAGTCCTTGATAGTT 2738
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2739 GCTTTTTATGTCCAGAGTTTTAATTTCAGTCAGAAAGAGAAATAGGCCTTGGTGAGCATGCTTTGTCTTGGCTG 2812
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2813 GTGCCAGAAGTCTGTACTCAAATATTTTTAAAATAATTTTTAGTTGAATAACAAGTTAGACCTGTGTTTAGCTT 2886
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2887 TCTCATTGTTTTCCTAAAAATAGAAGAAAAGGTTTTAAATACTTTAACCACGAAATACTTTAAAGCAGGTTTAA 2960
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2961 AATAAACTCCTTCATTTTGCCTGTTCTATTACTCTGTTCTCACACTGCTAATAAAGACATACCCAAGACTGGTA 3034
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3035 ATTTATAAAGTAAAGAGGTTTAATTGACTCACAGTTCCACATGGCTGGGGAGGCCTCCCAATCATGGCAGAAGG 3108
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3109 TGAATGAGGAGCAAAGTCACATCTTTGTGGCAGGCAAGAGAGAGAGCATGTGTGCAGGGGAATTCCCCTTTATA 3182
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3183 AAACCGTCCAATCTCATGAGACTTATGCACTCTCATGGGAGCAGCATGAGAAAGACTCACCTCCGTGATTCAGT 3256
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3257 TACCTCCCACTGTGTCCCTGCCACAACATGTGGGAATTGTGGGAGCTAAAAATCAAGATGAGATTTGGGTAGGA 3330
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3331 ACACAGTCAAACCATATCTCCTGTATACATTCACACTAGCATTTTAGTTTTAGAACTAGTTCTATGTTACTATC 3404
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3405 TGAATTAATTTTTCCACAATTTTGTAAGGAAAAATAATGCGTTCTTTGAATTTCATGTGTAAATGATATTTTTA 3478
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3479 GTTTTGTGTCATTTTGTCCAATAAATTCTGAAAATCTTTGTATTGACAGTGTGTTATCTCTGCATAACCATATA 3552
Query 391 ------------------------------------- 390
Sbjct 3553 TGTATAAGAGCGCTCAATAAAAAGAATAAAGAGGAAA 3589
