Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10614
- Subject:
- NR_026589.1
- Aligned Length:
- 5246
- Identities:
- 380
- Gaps:
- 4856
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGAGGACGAGCAGCCCGACAGCCTGGAGGGCTGGGCGCCGCTCCGGGAGGGCCTCTTCGCCGATCCCCAGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCACCGGTTGCGCTTCCTGGTGGCTTGGAACGGCGCGGAGGGCAAGTTTGCTGTGACTTGTCACGACCGCACCG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CGCAGCAGCCGCAGCGGCGCGAGGGGGCCCGGCTGGGGCTGGAGCACAAGCCCGAGGCCGCCGTGTCCCCGCCC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGCTGGGCCGGCCGGCTCTCGGCCGCGGGGTTCCGCGGCGCGCGCCGGCAGCCAGCGGCGCTGTGGCCGCCTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GGAACACTGCTTCCCACGGCTGCCGCCGGAGCTGGACGTGGGCGGCGGCGGGGCCTGAGGTCTGGGGCTCGGGC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GGTGGGCGCTGCTCTGGCCGGCGCGCGTGGGCCCCGGCGAGGCGGCGCTGCAGGAGCTTTGCGGGCAGCTGGAG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CGCTACCTGGGCGCGGCGGCCCACGGCTGTGGCGGCGCCACCGTGCGCGACGCTCTCTTCGCGGCTAAGGGCCG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CGCGGCCGACTGCGAGAGCCCGCGCGAGTTTCGGGAGCGGGCCCTGCGCGCCTGATGGGTCGAGGCGGACGCGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGCTGCGTCAGGTTATTCAAGGACACGGAAAAGCCAACACCATGGTAGCATTAATGAAAGTTTACCAAGAGGAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GATGAAGCCTACCAGGAATTAGTTACCGTGGCAACCACGTTCTTCCAGTACTTATTGCGGCCATTTAGGGCTAT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCGAGAAGTTGCAACTTTATGTAAGCTTGATATTTTGAAGTCCTTGGATGAGGATGACCTAGGTCCTAGAAGGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TAGTTGCCCTGGAGAAAGAAGCTGAAGAATGGACCAGACGGGCTGGAGAAGCTGTCGTCTCTATTCAAGATATC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACAGTGAATTATTTTAAGGAGACAGTAAAAGCATTAGCAGGAGTTTCTGATATATTGCACAGAATCAACAAGAT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ATAAAGCAGAATGATGATCCTGGTTTTTTGGTCAAACTATCCATATGAGCCTGTCTGTCTAGCTAGTCATAGAA 1036
Query 1 -----ATGGAAGCAAGTGTGCCAAAATATAAGAAGCACTTGCCTCAACTAGGAATGCAGAAAGAAATGGAACAG 69
||||||||||||||||||||||||||||||||.||||||||||||||||||||.|||||||||||||||
Sbjct 1037 ACAATATGGAAGCAAGTGTGCCAAAATATAAGAAGCAGTTGCCTCAACTAGGAATGCAAAAAGAAATGGAACAG 1110
Query 70 GATGTGAAGAGATTTGGCCAGGCTGCCTGGGCCACAGCAATTCCCAGGTTGGAAAAACTTAAGCTAATGCTAGC 143
||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GATGTGAAGAGACTTGGCCAGGCTGCCTGGGCCACAGCAATTCCCAGGTTGGAAAAACTTAAGCTAATGCTAGC 1184
Query 144 TCAAGAGACTCTGCAACTCATGAGAGCGAAAGAGTTATGTTTAAATCACAAAAGAGCTGAAATTCAGGGAAAGA 217
|||||||||||||||||||||||||||||||||.||.|.|||||||..||||||||||||||||||||||||||
Sbjct 1185 TCAAGAGACTCTGCAACTCATGAGAGCGAAAGAATTGTATTTAAATTGCAAAAGAGCTGAAATTCAGGGAAAGA 1258
Query 218 TGGAAGATCTTCCAGAACAAGAAAAAAATATAAATGTTGTAGATGAATTAGCAATACAATTTTATGAAATTCAG 291
|||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||
Sbjct 1259 TGGAAGATCTTCCAGAACAAGAAAAAAATATAAATGTTGTAGATGAATTAGAAATACAATTTTATGAAATTCAG 1332
Query 292 TTAGAACTATATGAAGTTAAATTTGAGATATTAAAAAACAAAGAAATACTGCTTACTACACAGTTGGACTCTCT 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1333 TTAGAACTATATGAAGTTAAATTTGAGATATTAAAAAACAAAGAAATACTGCTTACTACACAGTTGGACTCTCT 1406
Query 366 TGAAAGACTTATAAAA---------GATGAAATT---------------------------------------- 390
|||||||||||||||| ||||||.||
Sbjct 1407 TGAAAGACTTATAAAAGAAAAACAGGATGAAGTTGTCTATTACGATCCATGTGAAAGTCCAGAGGAACTTAGTC 1480
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1481 ATTGACTGTGGTGGGGCTGCAGGACGATAAGAATTCGGAAGTGAAAGAACTCAGAAGGCAGTGCCAGCAGCTGG 1554
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1555 AGTCTATTAAACGGGGCAGGATCTGTGTCAAAAGAGCTTCTCTCCAGAGTAGAAAGGATCAGTGCAAAGAAAAT 1628
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1629 CATTGGCTCAGATTGCAACAGGCTGAAGAAAGCATAAGATATTCTCGTCAGCATCACAGTATTCAGATGAGACA 1702
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1703 AGATAAAAAGGAGCAAAAGAAAAAAGAATGGGTCAACCAAGAACGTCAAACACTCCAACGATTGAGAGCATTTA 1776
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1777 AAGATGTAAGTTCTATAAACAATCACCTCATCTACACTTCTGGGGAAATAAATGAAGACCGCTCTAAAGAGGAA 1850
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1851 AGTATTAAGAACAGGTCATTCAGAACATGAAACATTTAAAAAATAACATTATTTCTGGTATATCAATAAAAAGC 1924
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1925 AACAACAAAAATAGAATATCAGTGATTCAAAACCCATGATATAAAATAACTGCTGTTTTTAACATCACAACACG 1998
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1999 CTTGGGTTCCTGCTCTGCACTCTTCACTGAGTAGTCCTTACTGGCACTGGTGGTTTAGATTGGCAGGGAAAACT 2072
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2073 GAAAACTGTTCAACTCCCTTGACTTTAGCTGGCATTTCCTCTCATTTGTAATAAACAATTCTTTAAAATGTTAT 2146
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2147 CCAGGCAGCATTGTGATATAAGTGTAGTGAAAGTGCCCAGTTAAAAGTAAAATGTGTTGTTGTTTTTTTTTGAT 2220
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2221 ATCTACAACTTTCTTTTTTCTTTTTTTTTAAAGTATATACTTAAGAGGATGATGTTATTTTTTTATGCCCTCTG 2294
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2295 TTCCAGGCCTACATTTGTATTTCCTCCACAAAATGATCCTCAGTCTGTAATTTTTGTTCTATTTGACTTTATTA 2368
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2369 TTAGAGATAAATTCCTTTAATTAAAAAAAAGCTACTATGAAGGTTGAAAAAATAATTTTTTGGTTTTATTTTTA 2442
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2443 ATTGACACATAATTGTACATATTTATGAGGTATAGTGTGATATTTTGAGGTATATAATATGGAATGATCAAATC 2516
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2517 AGGGTAATTAGCGTATCTATCACCTCAAACATTTATCTACAGGTAAATAGGTTTTTTAAAATAAAGTAAATAGG 2590
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2591 GAGTCTGGCACAGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGGCTGAGGCGGGCGGATTGCTTGAGACCA 2664
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2665 TGAATTTGAGACCAGGCTGGGCAACATGGTGAAACCCCAGCTCTCCTAAAAATACAAAAATTAGCTGGACATGG 2738
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2739 TGGTGCATGCCTGTAGTCCCAGCTACTTGGGAGGAAAAATACCAATTGTGCACATATTTTTGTAAAATTATACA 2812
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2813 TAAACACTTTATTTTTTATGTCATTCTAAATAATTTTTTGTATGTTTCTATTTCCAAACGTTGTTTGGTAATAT 2886
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2887 ATAGAAATATGATTGATTTTGTTTATTGAGTTTGCATATAACCACATTACTAAACTCGCATATTGAGCATTTTA 2960
Query 391 -------------------------------------------------------------------------- 390
Sbjct 2961 ATAGGTTATTTTGAATACTTTTACATAGACTGTTGTCTGAAAATAGAAACAGGTTTATTTCTTCCTTTCTGATG 3034
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3035 TGGATGTCACTGATTTTTTTCCCTACATTACTGATCTGGCTAGGACTATCAGTATAAAGTTGAATATAAGTGGT 3108
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3109 AAAAGATCTGACTTCTTGCCTTGGACCCAGTTTTTAAATCAGTTGGAGAGTCACCATTAAGTGTAATTTAGTGG 3182
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3183 TAGTTTTGTTTGTTTTTTTTTTGTTTGTTTTGTAGATGCCCTCTATCAGGATAAGTTCCCTTTTCTCATTTTGC 3256
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3257 TGAGAGTTTTTATAAAGAATAGCTATTGAATTTTGTCAAATGCTTTTGCTGCATCTGCTGAAATGACACGTTTA 3330
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3331 TTCTTCATCTACCTAATAATGTTGCAATTTATATCTGTTGAGCTTTGAATGTTGAACCAGCCTTGCATTCATGG 3404
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3405 TATAAATCACTTGTTTGTAAAGTATTGTTTTTAAATATTGCTAGATTTGATATCTTAGTATTGTATTTTTATAT 3478
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3479 TTGTCTTCATGTGTTTTTGTTTTCTCATAAGTGTCTGTACCCCCCTTTTTTTTTCTTTAAAGAGAAATAATGAG 3552
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3553 AGAGATTGTCTCTCTTGAAGTTCTCAGTGCCTGTGCATTGCTGCCACTACACAGCTAGTATCATGACAGCAGCT 3626
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3627 TCAGAACCAGAGCTGGCTTCCAGGCAAGGCTGGGTGGGGAAGAAAGAGAAAAACAAAAGAATTATTTCTCTATG 3700
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3701 CCGAGACCAGCTCGGTCAGGGAGACCCTAACCTAGCGGTGCTAGAGGAATTAAAGACATAGACACAGAAATATA 3774
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3775 GAGGTGTGAAGTGGGAAATCAGGGGTCTCACAGCCTTCAGAGCTCAGCCACAAACAGAGATTTACCCACGTATT 3848
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3849 TATTAACAGCAAGCCAGTCATTAGCATTGTTTCTATAGATATTAAATTAACTAAAAGTATCCCTTATGGGAAAC 3922
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3923 GAAGGGATGGGCCGAATTAAAGGAATAGGTTGGGCTAGTTAACTGCAGCAGGAGCATGTCCTTAAGGCACAGAT 3996
Query 391 -------------------------------------------------------------------------- 390
Sbjct 3997 CACTCATGCTATTGTTTGTGGTTTAAGAATGCCTTTAAGCGGTTTTCCACCCCGGGCAGGCCAGGTGTTCTTTG 4070
Query 391 -------------------------------------------------------------------------- 390
Sbjct 4071 CCCTCATTCCAGTAAACCCACAACCTTCCAGTATGGGTGTTAGGGCCATTATGAACATGTTACAGTGCTGCAGA 4144
Query 391 -------------------------------------------------------------------------- 390
Sbjct 4145 GATTTTATTTATGGCCAGTTTATGGCCAGATTTTGGGGGGCCTGCTCCCAACACTCTACATATGCTCCATCTTG 4218
Query 391 -------------------------------------------------------------------------- 390
Sbjct 4219 CAGAGGCTTCATTCTTGGTTCTCTAGCTAAAAACAGTAGAAATTTTGCACACCTGGGTTAGAAAAAAAAAAAAT 4292
Query 391 -------------------------------------------------------------------------- 390
Sbjct 4293 AGCCATTAAACCCACCCCTGTTACAGGTCACTATTGGTATTTTGATTTTGCCTTCAATCCATCTGTTATTGTTT 4366
Query 391 -------------------------------------------------------------------------- 390
Sbjct 4367 ACTTTTAAGAGTCCTTGATAGTTGCTTTTTATGTCCAGAGTTTTAATTTCAGTCAGAAAGAGAAATAGGCCTTG 4440
Query 391 -------------------------------------------------------------------------- 390
Sbjct 4441 GTGAGCATGCTTTGTCTTGGCTGGTGCCAGAAGTCAGTACTCAAATATTTTTAAAATAATTTTTAGTTGAATAA 4514
Query 391 -------------------------------------------------------------------------- 390
Sbjct 4515 CAAGTTAGACCTGTGTTTAGCTTTCTCATTGTTTTCCTAAAAATAGAAGAAAAGGTTTTAAATACTTTAACCAC 4588
Query 391 -------------------------------------------------------------------------- 390
Sbjct 4589 GAAATAATTTAAAGCAGGTTTAAAATAAACTCCTTCATTTTGCCTGTTCTATTACTCTGTTCTCACACTGCTAA 4662
Query 391 -------------------------------------------------------------------------- 390
Sbjct 4663 TAAAGACATACCCAAGACTGGTAATTTATAAAGTAAAGAGGTTTAATTGACTCACAGTTCCACATGGCTGGGGA 4736
Query 391 -------------------------------------------------------------------------- 390
Sbjct 4737 GGCCTCCCAATCATGGCAGAAGGTGAATGAGGAGCAAAGTCACATCTTACATGGTGGCAGGCAAGAGAGAGAGC 4810
Query 391 -------------------------------------------------------------------------- 390
Sbjct 4811 ATGTGTGCAGGGGAATTCCCCTTTATAAAACCATCCAATCTCATGAGACTTATGCAGTCTCATGGGAGCAGCAT 4884
Query 391 -------------------------------------------------------------------------- 390
Sbjct 4885 GAGAAAGACTCACCTCCGTGATTCAGTTACCTCCCACTGTGTCCCTGCCACAACATGTGGGAATTGTGGGAACT 4958
Query 391 -------------------------------------------------------------------------- 390
Sbjct 4959 AAAAATCAAGATGAGATTTGGGTAGGAACACAGTCAAACCATATCTCCTATATACATTCACACTAGCATTTTAG 5032
Query 391 -------------------------------------------------------------------------- 390
Sbjct 5033 TTTTAGAACTAGTTCTATGTTACTATCTGAATTAATTTTTCCACAATTTTGTAAGGAAAAATAATGCGTTCTTT 5106
Query 391 -------------------------------------------------------------------------- 390
Sbjct 5107 GAATTTCATGTGTAAATGATATTTTTAGTTTTGTGTCATTTTGTCAAATAAATTCTGAAAATCTTTGTATTGAC 5180
Query 391 ------------------------------------------------------------------ 390
Sbjct 5181 AGTGTGTTATCTCTGCATAACCATATATGTATAAGAGTGCTCAATAAAAAGAATAAAGAGGAAACA 5246
