Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10614
- Subject:
- XM_005272421.4
- Aligned Length:
- 1800
- Identities:
- 363
- Gaps:
- 1422
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGTAGCATTAATGAACGTTTACCAAGAGGAAGATGAAGCATACCAGGAATTGGTTACCGTGGCAACCATGTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CTTCCAGTACTTATTGCAGCCATTTAGGGCTATGCGAGAAGTTGCAACTTTATGTAAGCTTGATATTTTGAAGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CTTTGGATGAGGATGACCTAGGTCCTAGAAGGGTAGTTGCCCTGGAGAAAGAAGCTGAAGAATGGACCAGACGG 222
Query 1 ---------------------AT---GGA-AGCA-AGTGTGCCAAAATA---TAAG----------AAGCACTT 35
|| ||| |.|| |||| ||.|| |||| |||||.|.
Sbjct 223 GCTGAAGAAGCTGTCGTCTCTATTCAGGATATCACAGTG-----AATTATTTTAAGGAGACAGTAAAAGCATTA 291
Query 36 GCCTCAACTAGGAATGCAGAAAGAAATGGAACAGGATGTGAAGAGATTTGGCCAGGCTGCCTGGGCCACAGCAA 109
|| |||||||||||||||||||||||||||||.||||||||||||.||||||||||||||||||||||
Sbjct 292 GC-------AGGAATGCAGAAAGAAATGGAACAGGATGCGAAGAGATTTGGTCAGGCTGCCTGGGCCACAGCAA 358
Query 110 TTCCCAGGTTGGAAAAACTTAAGCTAATGCTAGCTCAAGAGACTCTGCAACTCATGAGAGCGAAAGAGTTATGT 183
||||||||||||||||||||.|||||||||||||||.|||||||||||||||||||||||||||||||||.|||
Sbjct 359 TTCCCAGGTTGGAAAAACTTCAGCTAATGCTAGCTCGAGAGACTCTGCAACTCATGAGAGCGAAAGAGTTGTGT 432
Query 184 TTAAATCACAAAAGAGCTGAAATTCAGGGAAAGATGGAAGATCTTCCAGAACAAGAAAAAAATATAAATGTTGT 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||
Sbjct 433 TTAAATCACAAAAGAGCTGAAATTCAGGGAAAGATGGAAGATCTTCCAGAACAAGAAAAAAATACAAATGTTGT 506
Query 258 AGATGAATTAGCAATACAATTTTATGAAATTCAGTTAGAACTATATGAAGTTAAATTTGAGATATTAAAAAACA 331
|||||||||||.|||||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||.
Sbjct 507 AGATGAATTAGAAATACAATTTTATGAAATTCAATTAGAACTATATGAAGTTAAATTTGAGATATTAAAAAACG 580
Query 332 AAGAAATACTGCTTACTACACAGTTGGACTCTCTTGAAAGACTTATAA---------AAGATGAAATT------ 390
|||||||||||||||||||||||||||||||||||.|||||||||||| ||||||||.||
Sbjct 581 AAGAAATACTGCTTACTACACAGTTGGACTCTCTTAAAAGACTTATAAAAGAAAAACAAGATGAAGTTGTCTAT 654
Query 391 -------------------------------------------------------------------------- 390
Sbjct 655 TACGATCCATGTGAAAATCCAGAGGAACTTAAAGTCATTGACTGTGTGGTGGGGCTGCAGGATGATAAGAATTT 728
Query 391 -------------------------------------------------------------------------- 390
Sbjct 729 GGAAGTGAAAGAACTCAGAAGGCAGTGCCAGCAGCTGGAGTCTAAACGGGGCAGGATCTGTGCCAAAAGAGCCT 802
Query 391 -------------------------------------------------------------------------- 390
Sbjct 803 CTCTCCGGAGTAGAAAGGATCAGTGCAAAGAAAATCATCGGTTCAGATTGCAACAGGCTGAAGAAAGCATAAGA 876
Query 391 -------------------------------------------------------------------------- 390
Sbjct 877 TACTCTCGTCAGCATCACAGTATTCAGATGAAAAGAGACAAGATAAAAGAAGAGGAGCAAAAGAAAAAAGAATG 950
Query 391 -------------------------------------------------------------------------- 390
Sbjct 951 GATCAACCAAGAACGTCAAAAAACACTCCAACGATTGAGATCATTTAAAGATAAACGCCTAGCTCAATCTGTCC 1024
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1025 GAAACACCTCTGGCTCAGAACCTGTGGCTCCAAACCTGCCAAGTGATCTTTCCCAGCAGATGTGCTTGCCAGCT 1098
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1099 TCCCACGCGGTGTCAGTAATTCACCCGTCCTCTAGGAAAACTAGAGGTGTTCCCCTATCGGAAGCTGGTAATGT 1172
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1173 GAAAAGCCCCAAGTGTCAAAACTGTCATGGAAATATCCCTGTCCAGGTTTTTGTTCCAGTTGGTGATCAAACAC 1246
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1247 ATTCCAAATCCAGTGAGGAATTGTCACTGCCACCACCTCCTCCTCCTCCACCACCACCACCGCCGCCACCGCCG 1320
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1321 CCCCCACCCCCTCCTCTCCGTGCTCTGTCCTCATCCTCTCAAGCTGCAACTCATCAGAACTTAGGCTTCCGGGC 1394
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1395 TCCAGTGAAAGATGACCAGCCACGTCCTCTAGTGTGCGAATCACCTGCTGAGCGACCACGTGACTCCTTGGAAA 1468
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1469 GTTTTTCATGTCCAGGATCTATGGATGAAGTGTTGGCCTCCTTAAGGCATGGCAGAGCTCCTCTCCGGAAGGTG 1542
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1543 GAAGTGCCGGCGGTGCGCCCTCCCCACGCCTCAATCAATGAGCACATTCTGGCTGCCATAAGGCAAGGGGTCAA 1616
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1617 ACTGAAGAAAGTTCACCCTGATCTTGGCCCAAACCCCAGCAGCAAACCAACCAGCAACAGACGCACCAGTGACC 1690
Query 391 -------------------------------------------------------------------------- 390
Sbjct 1691 TTGAGAGGAGCATCAAGGCTGCGCTCCAGAGAATCAAGAGGGTGTCTGCTGACTCTGAGGAGGACAGTGATGAG 1764
Query 391 ------------------------ 390
Sbjct 1765 CAGGACCCTGGCCAGTGGGATGGT 1788
