Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10630
- Subject:
- NM_001146262.3
- Aligned Length:
- 1728
- Identities:
- 515
- Gaps:
- 1170
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCGATTGAAGGTGGAGAGAGAACCTGTGGAGTACATGAACTTATCTGTATTAGAAAAGTATCTCCAGAGGC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGTTGGATTTTTGTCAGCTGTTGGGGTGTTTATTATCTTGATGCTGCTCCTTTTTCTCTATATTAATAAGAAGT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TCTGTTTTGAAAATGTTGGCGGGTTTCCAGATCTTGGTTCAGAATACAGTACAAGGAAGAATTCACAAGATAAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 ATTTATAATTCCTACATGGACAAAGATGAGCATGGTTCATCCTCTGAAAGTGAAGATGAAGCGCTGGGTAAATA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TCATGAGGCCTTATCCAGAACACACAATTCCAGACTACCACTGGCAGATTCTAGACAAAGGAACTATGCTTGGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AAACAAGGCAGAAATACAGTCCTCTATCGGCAGAGTATGATGGATACAGTAGTGAAGCATCAATAGATGAAGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AACTGCATTCAGAGAATGAGAAGAACACCCCCGCTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTCTCCCCATCTGTCATGTACACCCTCAGAAATTGGGGACAGTAAATGTGAATTTTCCCACTGCAGCAACAGTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CAAGATGCTCATATAACAAGTGCCCAAGTGAAGGAAGCACAGGTCATGAAATAGAAAGTTTTCATAATAAAGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 TATGAAGAAGATGTTCCAAGTGACAGCACTGCAGTCCTGAGCCCTGAAGATATGTCAGCTCAAGGATCATCTTC 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCAGCTTCCTAAACCTTTTGATCCTGAGCCAGAAGCTAAATATGGCACACTGGATGTGACTTTTGACTATGACT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CACAAGAACAGAAGCTTCTGGTAACAGTGACAGCTGTCACAGACATCCCAACATATAACAGGACAGGTGGCAAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCATGGCAAGTACACCTTGTTCTTCTACCTATAAAGAAACAGAGAGCAAAAACCAGCATCCAGAGAGGACCATG 962
Query 1 --------------------------------ATGTTGGA---GGGCT------------TCCAGATCTTGGTT 27
||||||.| |.|.| |.|||.|| ||||
Sbjct 963 CCCTGTCTTCACAGAAACATTTAAATTTAATCATGTTGAATCTGAGATGATTGGAAATTATGCAGTTC--GGTT 1034
Query 28 CAGA----ATACAGTACA----AGGAACAA-------------------------------TTCACAAGAT--- 59
.||| ||...||||| |.|||.|| ||.||||.||
Sbjct 1035 TAGACTGTATGGTGTACATCGCATGAAAAAAGAAAAGATTGTGGGGGAAAAGATTTTTTATTTAACAAAATTGA 1108
Query 60 -----------AAAATG--------------------------------------TGTCTGTGACTCCCAAATG 84
|||||| ||.||||||||||||||||
Sbjct 1109 ATCTTCAAGGGAAAATGTCATTGCCTGTGATATTGGAACCTTCTTACAATCATTCTGGCTGTGACTCCCAAATG 1182
Query 85 AGTGTGTCAGAAATGTCTTGTAGTGAAAGTACATCCGCATGTCAGTCTCTCGAAGACGGGTCAGTTCCAGAAAT 158
||.||||||||||||||.||||||||||||||||||.|||||||||||||.|||.|.||.||||||||||||||
Sbjct 1183 AGCGTGTCAGAAATGTCGTGTAGTGAAAGTACATCCTCATGTCAGTCTCTTGAACATGGCTCAGTTCCAGAAAT 1256
Query 159 TCTCATTAGCCTGCTTTATAATGCCACAAATGGGAGACTATCAGCAGAAGTGATAAAAGGCAGCCACTTAAAAA 232
|||.|||.|||||||||||||||||||||.|||.|||||||||||||||||||||||||||||||||||.||||
Sbjct 1257 TCTTATTGGCCTGCTTTATAATGCCACAACTGGAAGACTATCAGCAGAAGTGATAAAAGGCAGCCACTTCAAAA 1330
Query 233 ATTGGGCAGCAAACAGACCACCCA-------------------------------------------------- 256
|||.||||||||||||||||||||
Sbjct 1331 ATTTGGCAGCAAACAGACCACCCAATGGACTGTTCTGTTGTCTAAAACACTTGATAGGTGGACAGGTTTATATA 1404
Query 257 -------ATACATATGTTAAGTTAACTCTACGGAAATCCACGGATCAAGAGATGTCCAAATGCAAGATATCCAT 323
||||||||||||||||||||||||.|||.||||.||.|||||||||||||||||||||||.||||||
Sbjct 1405 ATCCGAGATACATATGTTAAGTTAACTCTACTGAATTCCATGGGTCAAGAGATGTCCAAATGCAAGACATCCAT 1478
Query 324 CCGCAGAGGGCGGCCAAATCCAGTATACAAGGAAACTTTTGT-TTTCAAAGTGACCCTATTTCAGCTTTCTCAT 396
|||||||||||.|||||||||||||||.|||||||||||||| |||| |||||.|||||||||||||||||.||
Sbjct 1479 CCGCAGAGGGCAGCCAAATCCAGTATATAAGGAAACTTTTGTCTTTC-AAGTGGCCCTATTTCAGCTTTCTGAT 1551
Query 397 GTGACACTCATGCTGTCTGTGTATAACAAAAGCAGCATGAGAAGAA---AGATGATAGGCTGGATTTATTTAGG 467
|||||||||||.||||||||||||||||||.|||||||||.||||| ||||||||||||||||||.||||||
Sbjct 1552 GTGACACTCATACTGTCTGTGTATAACAAACGCAGCATGAAAAGAAAAGAGATGATAGGCTGGATTTCTTTAGG 1625
Query 468 TCTCAACAGCTCTGG---AGAAGAACTCAATCACTGGACTGAAATGAAAGAGTCAAAAGGACGGCAAGTACGTA 538
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||.|||||||.|||
Sbjct 1626 TCTCAACAGCTCTGGAGAAGAAGAACTCAATCACTGGACTGAAATGAAAGAGTCAAAAGGACAGCAAGTATGTA 1699
Query 539 GATGGCAGGCGTTGCTAGAGTCACGA 564
|||||||.|||||||||||||||
Sbjct 1700 GATGGCATGCGTTGCTAGAGTCA--- 1722
