Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10630
- Subject:
- XM_006711262.3
- Aligned Length:
- 2598
- Identities:
- 515
- Gaps:
- 2040
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCATTTTTCAGAAATTTCCAACAGAATCTGCCTTCAGTGTCCTCTCTAGTAGACACAATCAGTAGTGCTGT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AGAGGATTTGACCACTGCTGTTGGGGAGGTCAGCTATGCTTTAACTGACTCAGTTGCTGAGCAGGTAACAAGTA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 TGATGAGTGGCTTTCGCCCAGAAGAGGAAAGCTCTGTAGCAGAAGAAGCTGTAGACACTTCTAAACAAAAAAAT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GCCGGGTTAACAGAAGTCTCCAAAAACACTAATTGTCAGAAAACACAAGCCAATTTAGAGCATAGAGCAAAGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 AATAAATACTTGTAAAACTTCACTAAAGCAAGATCAAGGAATACATGAAGAAAGAGTATTTAAACATGTTAATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATAGGCAACAAACTCTATCAGAATATCAAGACACTGGTAATACTGGTGATTCTTCTTTGAAAGGCTACATGAAT 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AATGGTGGGATATCAGTTATCAGACAGAATACAAGGGCTGGATCTATTTGTCAAGAACTTGAAAGTACTGACAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ATGTAAAACAATTGGAGTAGGAATTTCCAATAATGGTAAGAATGATTTAAAGGAGGTAGGATATCAAGAAATGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAGGAAATCAGAAGAATGCCAACGGAATAAACAAATTGTATGAGCAAAAGAAATATGTTGGTACAGATAATTGT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAAAAGGAGGAATATTCTAAATCTCGACATGTATATTTGGGAAGAGATCAAGAGAATATGGGGCATTTCAATAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ATGTAAACATCTTCCCGATTTAGGGCATTCAGATCATTTAAAGAAAGCTGAAAAATGTGTTAAAAGTAAAGCAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CCAAAGGGAATGAGTGTTCAGGAAATGAATGTTCTTTAAAAGATATTTTGACAAGCAATAGGCATATGACACAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 AAATCTATTATAAAAGAAGACATACATCCAGCACCATCAACTAATTCTAAAGATAAGTTATCTGGGAAAATTGA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 AGAACAAATAAATTCAACGAAATACTGTAAAGTGAACGAAGACATAAAACCAAAGAAAACTGAGGCCATTTCTG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CCAAGAAAGGAACAGCAAAGAGTAAAGATGAAAAATATTCTAAGATAATACCAGAAAAAGATAATTCCTACATG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 GACAAAGATGAGCATGGTTCATCCTCTGAAAGTGAAGATGAAGCGCTGGGTAAATATCATGAGGCCTTATCCAG 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 AACACACAATTCCAGACTACCACTGGCAGATTCTAGACAAAGGAACTATGCTTGGGAAACAAGGCAGAAATACA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 GTCCTCTATCGGCAGAGTATGATGGATACAGTAGTGAAGCATCAATAGATGAAGGAAACTGCATTCAGAGAATG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 AGAAGAACACCCCCGCTGGATGAATTGCAGCCACCACCATATCAGGATGACAGTGGTTCTCCCCATCTGTCATG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 TACACCCTCAGAAATTGGGGACAGTAAATGTGAATTTTCCCACTGCAGCAACAGTCCAAGATGCTCATATAACA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGTGCCCAAGTGAAGGAAGCACAGGTCATGAAATAGAAAGTTTTCATAATAAAGGATATGAAGAAGATGTTCCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AGTGACAGCACTGCAGTCCTGAGCCCTGAAGATATGTCAGCTCAAGGATCATCTTCGCAGCTTCCTAAACCTTT 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TGATCCTGAGCCAGAAGCTAAATATGGCACACTGGATGTGACTTTTGACTATGACTCACAAGAACAGAAGCTTC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 TGGTAACAGTGACAGCTGTCACAGACATCCCAACATATAACAGGACAGGTGGCAACTCATGGCAAGTACACCTT 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GTTCTTCTACCTATAAAGAAACAGAGAGCAAAAACCAGCATCCAGAGAGGACCATGCCCTGTCTTCACAGAAAC 1850
Query 1 --------------ATGTTGGA---GGGCT------------TCCAGATCTTGGTTCAGA----ATACAGTACA 41
||||||.| |.|.| |.|||.|| ||||.||| ||...|||||
Sbjct 1851 ATTTAAATTTAATCATGTTGAATCTGAGATGATTGGAAATTATGCAGTTC--GGTTTAGACTGTATGGTGTACA 1922
Query 42 ----AGGAACAA-------------------------------TTCACAAGAT--------------AAAATG- 65
|.|||.|| ||.||||.|| ||||||
Sbjct 1923 TCGCATGAAAAAAGAAAAGATTGTGGGGGAAAAGATTTTTTATTTAACAAAATTGAATCTTCAAGGGAAAATGT 1996
Query 66 -------------------------------------TGTCTGTGACTCCCAAATGAGTGTGTCAGAAATGTCT 102
||.||||||||||||||||||.||||||||||||||.
Sbjct 1997 CATTGCCTGTGATATTGGAACCTTCTTACAATCATTCTGGCTGTGACTCCCAAATGAGCGTGTCAGAAATGTCG 2070
Query 103 TGTAGTGAAAGTACATCCGCATGTCAGTCTCTCGAAGACGGGTCAGTTCCAGAAATTCTCATTAGCCTGCTTTA 176
||||||||||||||||||.|||||||||||||.|||.|.||.|||||||||||||||||.|||.||||||||||
Sbjct 2071 TGTAGTGAAAGTACATCCTCATGTCAGTCTCTTGAACATGGCTCAGTTCCAGAAATTCTTATTGGCCTGCTTTA 2144
Query 177 TAATGCCACAAATGGGAGACTATCAGCAGAAGTGATAAAAGGCAGCCACTTAAAAAATTGGGCAGCAAACAGAC 250
|||||||||||.|||.|||||||||||||||||||||||||||||||||||.|||||||.||||||||||||||
Sbjct 2145 TAATGCCACAACTGGAAGACTATCAGCAGAAGTGATAAAAGGCAGCCACTTCAAAAATTTGGCAGCAAACAGAC 2218
Query 251 CACCCA---------------------------------------------------------ATACATATGTT 267
|||||| |||||||||||
Sbjct 2219 CACCCAATGGACTGTTCTGTTGTCTAAAACACTTGATAGGTGGACAGGTTTATATAATCCGAGATACATATGTT 2292
Query 268 AAGTTAACTCTACGGAAATCCACGGATCAAGAGATGTCCAAATGCAAGATATCCATCCGCAGAGGGCGGCCAAA 341
|||||||||||||.|||.||||.||.|||||||||||||||||||||||.|||||||||||||||||.||||||
Sbjct 2293 AAGTTAACTCTACTGAATTCCATGGGTCAAGAGATGTCCAAATGCAAGACATCCATCCGCAGAGGGCAGCCAAA 2366
Query 342 TCCAGTATACAAGGAAACTTTTGT-TTTCAAAGTGACCCTATTTCAGCTTTCTCATGTGACACTCATGCTGTCT 414
|||||||||.|||||||||||||| |||| |||||.|||||||||||||||||.|||||||||||||.||||||
Sbjct 2367 TCCAGTATATAAGGAAACTTTTGTCTTTC-AAGTGGCCCTATTTCAGCTTTCTGATGTGACACTCATACTGTCT 2439
Query 415 GTGTATAACAAAAGCAGCATGAGAAGAA---AGATGATAGGCTGGATTTATTTAGGTCTCAACAGCTCTGG--- 482
||||||||||||.|||||||||.||||| ||||||||||||||||||.|||||||||||||||||||||
Sbjct 2440 GTGTATAACAAACGCAGCATGAAAAGAAAAGAGATGATAGGCTGGATTTCTTTAGGTCTCAACAGCTCTGGAGA 2513
Query 483 AGAAGAACTCAATCACTGGACTGAAATGAAAGAGTCAAAAGGACGGCAAGTACGTAGATGGCAGGCGTTGCTAG 556
||||||||||||||||||||||||||||||||||||||||||||.|||||||.||||||||||.||||||||||
Sbjct 2514 AGAAGAACTCAATCACTGGACTGAAATGAAAGAGTCAAAAGGACAGCAAGTATGTAGATGGCATGCGTTGCTAG 2587
Query 557 AGTCACGA 564
|||||
Sbjct 2588 AGTCA--- 2592
