Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10636
- Subject:
- NR_027379.1
- Aligned Length:
- 2884
- Identities:
- 369
- Gaps:
- 2515
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AAAATGACCTCTGAGTCTTACACATTCTGCCTGCTAAGAGTGATTTTGCATGCCTGAGGCCTCGGGCCATGCTG 74
Query 1 ------------------------------------------------------ATGCTGGGTCCCAATGCCCA 20
||||||||||||||||||||
Sbjct 75 TACCGGTGTGACTAGAAACAGCTCTTCTGGCATGATGGTGACCTGCCATGGAAAATGCTGGGTCCCAATGCCCA 148
Query 21 AGTGACTGTAGTTGTGGCTCAGCCAGGACCCGACCATTTAGATCACCTGTTGTTAGACACGCAACACTGTCAAC 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 AGTGACTGTAGTTGTGGCTCAGCCAGGACCCGACCATTTAGATCACCTGTTGTTAGACACGCAACACTGTCAAC 222
Query 95 ATAGTTCCTGTGGGTCAGCAGCCTGTACACAGCTTACCTGGGTCCCCTGCTTGGGGGGATCTCACAAGGCTTCA 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ATAGTTCCTGTGGGTCAGCAGCCTGTACACAGCTTACCTGGGTCCCCTGCTTGGGGGGATCTCACAAGGCTTCA 296
Query 169 ATCAAGATGTCAGCCCAGGCTGTGGTCTCCACTGAGGCTCCGTGGGAAAGACCCTGCTTCCAAGCTCACCTAGG 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 ATCAAGATGTCAGCCCAGGCTGTGGTCTCCACTGAGGCTCCGTGGGAAAGACCCTGCTTCCAAGCTCACCTAGG 370
Query 243 TTGTTTGCAAAATTCGGTTCTTTGCAGCTGTAGAATGGAGGGCTTCAGTTTATTTCTAGCTATGCTGTGGGGCG 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TTGTTTGCAAAATTCGGTTCTTTGCAGCTGTAGAATGGAGGGCTTCAGTTTATTTCTAGCTATGCTGTGGGGCG 444
Query 317 GGGTGGGGGAGCTGCCCTCAGATCCTAGAGGTCACCTGCAATTCCTTGCCACT--------------------- 369
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GGGTGGGGGAGCTGCCCTCAGATCCTAGAGGTCACCTGCAATTCCTTGCCACTTGACTATGTCCACAGAGGTGG 518
Query 370 -------------------------------------------------------------------------- 369
Sbjct 519 TCCATGCATTTCTGCTTCCTTTGCCAAAGCCAGCAACAAGAGACTCCAACAAGACACATCCTACCATCTCATGT 592
Query 370 -------------------------------------------------------------------------- 369
Sbjct 593 ATGCAATCCCGTGCAGGCAATCATGGACATGTCCATCACATACATAACCACGTCCATTCCATCACCTTTGCTGT 666
Query 370 -------------------------------------------------------------------------- 369
Sbjct 667 ATTCTATTGGCCCACTCAAAGGGTGTGGACTAATTAGGGAGCGAGAATCAGCCCTCTTAAGTCAGCCCTCTCTA 740
Query 370 -------------------------------------------------------------------------- 369
Sbjct 741 TTTCATGTGCCAACTCTCTAGAATATTGATCCTTTTGGTATTTTAAGTCATATCTATTGTCACTGGAAATCCTT 814
Query 370 -------------------------------------------------------------------------- 369
Sbjct 815 TTTGAAGTAGAAAGGACAGAGCTCACAAAATACAAACCGCGCCACTATTCCTGCCTGTCATTTAGAGTTTTGCC 888
Query 370 -------------------------------------------------------------------------- 369
Sbjct 889 AGGGGAGCAGGTTGATTTCAGTCTTTTCATGGAGTTTACTGTTTGATATGATGATATCTTTACCCCCATAATTA 962
Query 370 -------------------------------------------------------------------------- 369
Sbjct 963 ATTTTATTTTTAGTTTTGAGACATGGTCTCATTCTGTCACTCAAGCTGTAGTGCAGTGGTGCCATCTTGGCTCA 1036
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1037 CTGCAACCTCAACCAGCCCAGGTTCAAGAGATCCTCCCACCTCAGCTTCCTGGGACCACCCCAGTGGGATCACT 1110
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1111 GGCGCAAACCACTATGCCCAACTAATTTTTAAAAATTCTTTGTAGAGAGGGGGTTTCACTATGTTGCTCAAGCT 1184
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1185 GGTCTCAAGCTCCTGGGCTCAAGCAATCTGCTTGCCTTGGGCTCCTTTGGGATCCCACAAAGTGCTGGGATTAC 1258
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1259 AGGTGTGAGCCACCACACCTGCCCCCGCCCCATAATTAATTTTAAGTTAATCTCCACATTTCATTATCTTGGGC 1332
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1333 TAGATTTCGGGGGAGGGGCCTAATTTAGCTGGCATGTGCCCCATTGGGTGAATCGAATAAAAGCATAGCTGCCC 1406
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1407 TGGCATGGATCTGTGAACAAAAGTTCTCTGAAAAGAAATTTGGAAGAAAGACTTCATTCAGGAACAGTTCACAA 1480
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1481 ACTTTCTGTGTAAACCAGTTACTTTCCAGAGAACAAAGGGAGGATCCTGGTTTTATAGTAAAAGTTCATGCTCA 1554
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1555 GGTTGCCAATCAGGTCCATTTTATGAAAATGAAGGCTTTAAATTTGCTTAGTTCTGTTTGGTTGATGCAGCTGC 1628
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1629 ATTCTGATTAGTGGTTAGAACTGAGCCCTAATTGGTTCTTTCAGATGAGCTCTGATTGGCTGCTTTAGGTGAGC 1702
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1703 TCTGAAAGCCCCACTGTTAAACTGAGGTTGGGGGTTTCCAGGGAAACTCCGAGTATATGAGTTCTAGTCAGCAA 1776
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1777 ATGGCCTGGCCACTTGGCTCTCTTTAAAATTTTGGCCCAGTTAGGTACTTGGGATCCATCTTGAAGGATTGGCT 1850
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1851 CTTGAAGGATTTGTTCTGAGAACACTTGTGAACTTGAGAGGCCCAGTAAGGCAGAGTGAAAACCAGAACGCTTG 1924
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1925 GCACCTATCAGTTAGCACAGGATCCTTCCCTGGAACATCAGCATCCCTTATAAGTGTGTCTAACGGCCAACTCG 1998
Query 370 -------------------------------------------------------------------------- 369
Sbjct 1999 TAGACAGAGCTATTGTTAATACACTGTTCTGAGTATCCCTCTGTGAACACCTTCATCTGGTTGATACAGGAAAA 2072
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2073 TTAAGGAAGACAAAGTTTTGGGAAAGTGATTGAAATCGTGGAATAATCAAAGCAAATCAATGGCAGCTTGTGTT 2146
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2147 TAAAATTAAAAACCAACTGTCAAGCATGGCATTTACCTAAAGTAATTTCCAAAAGTAATCAACAGAGTGAACAA 2220
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2221 CACCCAGTGGGCCAGGACCATGTCAACGTTGGCTCATTTTCAGAAACAACATGGTGTCAGGGCTCCATGTTCAT 2294
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2295 GGACACCATGAGGGGAGTCTCCTAGCAATGACCCTCTTCTCTCCTGCAGGAAGTCCAAGGTCCTTTGCATGGCA 2368
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2369 GTCTTATCCCCAAATGGCATTTGCTTTCGACCCATGGTATTTCCATATTCCATGAAGAAAACTTTAAAAATATA 2442
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2443 GGCAAATCACCCTGCAAGTATCCAGAGAGTTTCCAGGGGGTTTCTCACACACACACACACGCACACACACACAC 2516
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2517 ACACATGTTTAGTGGGGATCTTTTAGGTCAATACATATAGATCTACATCATTATTAGTTGTTGCTTGGTGGGCC 2590
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2591 ACTGCATGAATGGTTAATAATTGTTTAATTTTTCCTAGTTAGACAATAAAGATTTTTAAAGAATATATCTTTGC 2664
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2665 ATACTTGCTTATTTATTTGATTAGGATAAATTCCTGAAATTGGAATTGTTAAACCAAGAAATACGCATATTTTT 2738
Query 370 -------------------------------------------------------------------------- 369
Sbjct 2739 AAGGCTTTTGTTATGTTTTGTCAAATGATCCTCAGAAAGAATGTTTATTAATTCACATTTCCACTAGCACTACA 2812
Query 370 ------------------------------------------------------------------------ 369
Sbjct 2813 CGATAGAACTATTGGGTATTTTTTATGCTGTTACCTTTGCTGGTTTTATAAATAAAATATTCTCTTGTTCTT 2884
