Nucleotide Global Alignment

Description

• Query: ccsbBroad304_10749
• Subject: NM_001256091.1
• Aligned Length: 1515
• Identities: 572
• Gaps: 942

Alignment

Query    1  ATGAAATTCAAGTTACATGTGAATTCTGCCAGGCAATACAAGGACCTGTGGAATATGAGTGATGACAAACCCTT  74
                                                                  ||||||||||||||||||||
Sbjct    1  ------------------------------------------------------ATGAGTGATGACAAACCCTT  20

Query   75  TCTATGTACTGCGCCTGGATGTGGCCAGCGTTTTACCAACGAGGATCATTTGGCTGTCCATAAACATAAACATG  148
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   21  TCTATGTACTGCGCCTGGATGTGGCCAGCGTTTTACCAACGAGGATCATTTGGCTGTCCATAAACATAAACATG  94

Query  149  AGATGACACTGAAATTTGGTCCAGCACGTAATGACAGTGTCATTGTGGCTGATCAGACCCCAACACCAACAAGA  222
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   95  AGATGACACTGAAATTTGGTCCAGCACGTAATGACAGTGTCATTGTGGCTGATCAGACCCCAACACCAACAAGA  168

Query  223  TTCTTGAAAAACTGTGAAGAAGTGGGTTTGTTTAATGAGTTGGCGAGTCCATTTGAGAATGAATTCAAGAAAGC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  169  TTCTTGAAAAACTGTGAAGAAGTGGGTTTGTTTAATGAGTTGGCGAGTCCATTTGAGAATGAATTCAAGAAAGC  242

Query  297  TTCAGAAGATGACATTAAAAAAATGCCTCTAGATTTATCCCCTCTTGCAACACCTATCATAAGAAGCAAAATTG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  243  TTCAGAAGATGACATTAAAAAAATGCCTCTAGATTTATCCCCTCTTGCAACACCTATCATAAGAAGCAAAATTG  316

Query  371  AGGAGCCTTCTGTTGTAGAAACAACTCACCAGGATAGTCCTTTACCTCACCCAGAGTCTACTACCAGTGATGAG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  317  AGGAGCCTTCTGTTGTAGAAACAACTCACCAGGATAGTCCTTTACCTCACCCAGAGTCTACTACCAGTGATGAG  390

Query  445  AAGGAAGTACCATTGGCACAAACTGCACAGCCCACATCAGCTATTGTTCGTCCAGCATCATTACAGGTTCCCAA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  391  AAGGAAGTACCATTGGCACAAACTGCACAGCCCACATCAGCTATTGTTCGTCCAGCATCATTACAGGTTCCCAA  464

Query  519  TGTGCTGCTTACAAGTTCTGACTCAAGTGTAATTATTCAGCAGGCAGTACCTTCACCAACCTCAAGTACTGTAA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  465  TGTGCTGCTTACAAGTTCTGACTCAAGTGTAATTATTCAGCAGGCAGTACCTTCACCAACCTCAAGTACTGTAA  538

Query  593  TCACCCAGGCACCATCCTCTAACAGGCCAATTGTG---------------------------------------  627
            ||||||||||||||||||||||||||||||||||.                                       
Sbjct  539  TCACCCAGGCACCATCCTCTAACAGGCCAATTGTCCCTGTACCAGGCCCATTTCCTCTTCTGTTACATCTTCCT  612

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct  613  AATGGACAAACCATGCCTGTTGCTATTCCTGCATCAATTACAAGTTCTAATGTGCATGTTCCAGCTGCAGTCCC  686

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct  687  ACTCGTTCGACCAGTCACCATGGTGCCTAGTGTTCCAGGAATCCCAGGTCCTTCCTCTCCCCAACCAGTACAGT  760

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct  761  CAGAAGCAAAAATGAGATTAAAAGCTGCTTTGACCCAGCAACATCCTCCAGTTACCAATGGTGATACTGTCAAA  834

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct  835  GGTCATGGTAGCGGATTGGTTAGGACTCAGTCAGAGGAATCTCGACCGCAGTCATTACAACAGCCAGCCACATC  908

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct  909  CACTACAGAAACTCCGGCTTCTCCAGCTCACACAACTCCACAGACCCAAAGTACAAGTGGTCGTCGGAGAAGAG  982

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct  983  CAGCTAACGAAGATCCTGATGAAAAAAGGAGAAAGTTTTTAGAGCGAAATAGAGCAGCAGCTTCAAGATGCCGA  1056

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1057  CAAAAAAGGAAAGTCTGGGTTCAGTCTTTAGAGAAGAAAGCTGAAGACTTGAGTTCATTAAATGGTCAGCTGCA  1130

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1131  GAGTGAAGTCACCCTGCTGAGAAATGAAGTGGCACAGCTGAAACAGCTTCTTCTGGCTCATAAAGATTGCCCTG  1204

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1205  TAACCGCCATGCAGAAGAAATCTGGCTATCATACTGCTGATAAAGATGATAGTTCAGAAGACATTTCAGTGCCG  1278

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1279  AGTAGTCCACATACAGAAGCTATACAGCATAGTTCGGTCAGCACATCCAATGGAGTCAGTTCAACCTCCAAGGC  1352

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1353  AGAAGCTGTAGCCACTTCAGTCCTCACCCAGATGGCGGACCAGAGTACAGAGCCTGCTCTTTCACAGATCGTTA  1426

Query  628  -----------------------------------  627
                                               
Sbjct 1427  TGGCTCCTTCCTCCCAGTCACAGCCCTCAGGAAGT  1461