Nucleotide Global Alignment

Description

• Query: ccsbBroad304_10749
• Subject: NM_001256092.2
• Aligned Length: 1515
• Identities: 452
• Gaps: 1062

Alignment

Query    1  ATGAAATTCAAGTTACATGTGAATTCTGCCAGGCAATACAAGGACCTGTGGAATATGAGTGATGACAAACCCTT  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TCTATGTACTGCGCCTGGATGTGGCCAGCGTTTTACCAACGAGGATCATTTGGCTGTCCATAAACATAAACATG  148
               ||||||||||||||||||||||||                                               
Sbjct    1  ---ATGTACTGCGCCTGGATGTGGCCA-----------------------------------------------  24

Query  149  AGATGACACTGAAATTTGGTCCAGCACGTAATGACAGTGTCATTGTGGCTGATCAGACCCCAACACCAACAAGA  222
                                                              ||||||||||||||||||||||||
Sbjct   25  --------------------------------------------------GATCAGACCCCAACACCAACAAGA  48

Query  223  TTCTTGAAAAACTGTGAAGAAGTGGGTTTGTTTAATGAGTTGGCGAGTCCATTTGAGAATGAATTCAAGAAAGC  296
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   49  TTCTTGAAAAACTGTGAAGAAGTGGGTTTGTTTAATGAGTTGGCGAGTCCATTTGAGAATGAATTCAAGAAAGC  122

Query  297  TTCAGAAGATGACATTAAAAAAATGCCTCTAGATTTATCCCCTCTTGCAACACCTATCATAAGAAGCAAAATTG  370
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  123  TTCAGAAGATGACATTAAAAAAATGCCTCTAGATTTATCCCCTCTTGCAACACCTATCATAAGAAGCAAAATTG  196

Query  371  AGGAGCCTTCTGTTGTAGAAACAACTCACCAGGATAGTCCTTTACCTCACCCAGAGTCTACTACCAGTGATGAG  444
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  197  AGGAGCCTTCTGTTGTAGAAACAACTCACCAGGATAGTCCTTTACCTCACCCAGAGTCTACTACCAGTGATGAG  270

Query  445  AAGGAAGTACCATTGGCACAAACTGCACAGCCCACATCAGCTATTGTTCGTCCAGCATCATTACAGGTTCCCAA  518
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  271  AAGGAAGTACCATTGGCACAAACTGCACAGCCCACATCAGCTATTGTTCGTCCAGCATCATTACAGGTTCCCAA  344

Query  519  TGTGCTGCTTACAAGTTCTGACTCAAGTGTAATTATTCAGCAGGCAGTACCTTCACCAACCTCAAGTACTGTAA  592
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  345  TGTGCTGCTTACAAGTTCTGACTCAAGTGTAATTATTCAGCAGGCAGTACCTTCACCAACCTCAAGTACTGTAA  418

Query  593  TCACCCAGGCACCATCCTCTAACAGGCCAATTGTG---------------------------------------  627
            ||||||||||||||||||||||||||||||||||.                                       
Sbjct  419  TCACCCAGGCACCATCCTCTAACAGGCCAATTGTCCCTGTACCAGGCCCATTTCCTCTTCTGTTACATCTTCCT  492

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct  493  AATGGACAAACCATGCCTGTTGCTATTCCTGCATCAATTACAAGTTCTAATGTGCATGTTCCAGCTGCAGTCCC  566

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct  567  ACTCGTTCGACCAGTCACCATGGTGCCTAGTGTTCCAGGAATCCCAGGTCCTTCCTCTCCCCAACCAGTACAGT  640

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct  641  CAGAAGCAAAAATGAGATTAAAAGCTGCTTTGACCCAGCAACATCCTCCAGTTACCAATGGTGATACTGTCAAA  714

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct  715  GGTCATGGTAGCGGATTGGTTAGGACTCAGTCAGAGGAATCTCGACCGCAGTCATTACAACAGCCAGCCACATC  788

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct  789  CACTACAGAAACTCCGGCTTCTCCAGCTCACACAACTCCACAGACCCAAAGTACAAGTGGTCGTCGGAGAAGAG  862

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct  863  CAGCTAACGAAGATCCTGATGAAAAAAGGAGAAAGTTTTTAGAGCGAAATAGAGCAGCAGCTTCAAGATGCCGA  936

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct  937  CAAAAAAGGAAAGTCTGGGTTCAGTCTTTAGAGAAGAAAGCTGAAGACTTGAGTTCATTAAATGGTCAGCTGCA  1010

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1011  GAGTGAAGTCACCCTGCTGAGAAATGAAGTGGCACAGCTGAAACAGCTTCTTCTGGCTCATAAAGATTGCCCTG  1084

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1085  TAACCGCCATGCAGAAGAAATCTGGCTATCATACTGCTGATAAAGATGATAGTTCAGAAGACATTTCAGTGCCG  1158

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1159  AGTAGTCCACATACAGAAGCTATACAGCATAGTTCGGTCAGCACATCCAATGGAGTCAGTTCAACCTCCAAGGC  1232

Query  628  --------------------------------------------------------------------------  627
                                                                                      
Sbjct 1233  AGAAGCTGTAGCCACTTCAGTCCTCACCCAGATGGCGGACCAGAGTACAGAGCCTGCTCTTTCACAGATCGTTA  1306

Query  628  -----------------------------------  627
                                               
Sbjct 1307  TGGCTCCTTCCTCCCAGTCACAGCCCTCAGGAAGT  1341