Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10771
- Subject:
- NM_001190837.1
- Aligned Length:
- 3813
- Identities:
- 593
- Gaps:
- 3219
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGGCACAGAGCAAGAGGCACGTGTACAGCCGGACGCCCAGCGGCAGCAGGATGAGTGCGGAGGCAAGCGCCCG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GCCTCTGCGGGTGGGCTCCCGTGTAGAGGTGATTGGAAAAGGCCACCGAGGCACTGTGGCCTATGTTGGAGCCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CACTGTTTGCCACTGGCAAATGGGTAGGCGTGATTCTGGATGAAGCAAAGGGCAAAAATGATGGAACTGTTCAA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGCAGGAAGTACTTCACTTGTGATGAAGGGCATGGCATCTTTGTGCGCCAGTCCCAGATCCAGGTATTTGAAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGGAGCAGATACTACTTCCCCAGAGACACCTGATTCTTCTGCTTCAAAAGTCCTCAAAAGAGAGGGAACTGATA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CAACTGCAAAGACTAGCAAACTGGCACCGACAGCCCGAAAGACCACAACTCGGCGACCCAAGCCCACGCGCCCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GCCAGTACTGGGGTGGCTGGGGCCAGTAGCTCCCTGGGCCCCTCTGGCTCAGCGTCAGCAGGTGAGCTGAGCAG 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAGTGAGCCCAGCACCCCGGCTCAGACTCCGCTGGCAGCACCCATCATCCCCACGCCGGTCCTCACCTCTCCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GAGCAGTCCCCCCGCTTCCTTCCCCATCCAAGGAGGAGGAGGGACTAAGGGCTCAGGTGCGGGACCTGGAGGAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AAACTAGAGACCCTGAGACTGAAACGGGCAGAAGACAAAGCAAAGCTAAAAGAGCTGGAGAAACACAAAATCCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GCTGGAGCAGGTGCAGGAATGGAAGAGCAAAATGCAGGAGCAGCAGGCCGACCTGCAGCGGCGCCTCAAGGAGG 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGAGAAAGGAAGCCAAGGAGGCGCTGGAGGCAAAGGAACGCTATATGGAGGAGATGGCTGATACTGCTGATGCC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ATTGAGATGGCCACTTTGGACAAGGAGATGGCTGAAGAGCGGGCTGAGTCCCTGCAGCAGGAGGTGGAGGCACT 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GAAGGAGCGGGTGGACGAGCTCACTACTGACTTAGAGATCCTCAAGGCTGAGATTGAAGAGAAGGGCTCAGATG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCGCTGCATCCAGTTATCAGCTCAAGCAGCTTGAGGAGCAGAATGCCCGCCTGAAGGATGCCCTGGTGAGGATG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CGGGATCTTTCTTCCTCAGAGAAGCAGGAGCATGTGAAGCTCCAGAAGCTCATGGAAAAGAAGAACCAAGAGCT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GGAAGTTGTGAGGCAACAGCGGGAGCGTCTGCAGGAGGAGCTAAGCCAGGCAGAGAGCACCATTGATGAGCTCA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 AGGAGCAGGTGGATGCTGCTCTGGGTGCTGAGGAGATGGTGGAGATGCTGACAGATCGGAACCTGAATCTGGAA 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAGAAAGTGCGCGAGTTGAGGGAGACTGTGGGAGACTTGGAAGCGATGAATGAGATGAACGATGAGCTGCAGGA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 GAATGCACGTGAGACAGAACTGGAGCTGCGGGAGCAGCTGGACATGGCAGGCGCGCGGGTTCGTGAGGCCCAGA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 AGCGTGTGGAGGCAGCCCAGGAGACGGTTGCAGACTACCAGCAGACCATCAAGAAGTACCGCCAGCTGACCGCC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 CATCTACAGGATGTGAATCGGGAACTGACAAACCAGCAGGAAGCATCTGTGGAGAGGCAACAGCAGCCACCTCC 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 AGAGACCTTTGACTTCAAAATCAAGTTTGCTGAGACTAAGGCCCATGCCAAGGCAATTGAGATGGAATTGAGGC 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 AGATGGAGGTGGCCCAGGCCAATCGACACATGTCCCTGCTGACAGCCTTCATGCCTGACAGCTTCCTTCGGCCA 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 GGTGGGGACCATGACTGCGTTCTGGTGCTGTTGCTCATGCCTCGTCTCATTTGCAAGGCAGAGCTGATCCGGAA 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 GCAGGCCCAGGAGAAGTTTGAACTAAGTGAGAACTGTTCAGAGCGGCCTGGGCTGCGAGGAGCTGCTGGGGAGC 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 AACTCAGCTTTGCTGCTGGACTGGTGTACTCGCTGAGCCTGCTGCAGGCCACGCTACACCGCTATGAGCATGCC 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 CTCTCTCAGTGCAGTGTGGATGTGTATAAGAAAGTGGGCAGCCTGTACCCTGAGATGAGTGCCCATGAGCGCTC 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 CTTGGATTTCCTCATTGAACTGCTGCACAAGGATCAGCTGGATGAGACTGTCAATGTGGAGCCTCTCACCAAGG 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CCATCAAGTACTATCAGCATCTGTACAGCATCCACCTTGCCGAACAGCCTGAGGACTGTACTATGCAGCTGGCT 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 GACCACATTAAGTTCACGCAGAGTGCTCTGGACTGCATGAGTGTGGAGGTAGGACGGCTGCGTGCCTTCTTGCA 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 GGGTGGGCAGGAGGCTACAGATATTGCCCTCCTGCTCCGGGATCTGGAAACTTCATGCAGTGACATCCGCCAGT 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TCTGCAAGAAGATCCGAAGGCGAATGCCAGGGACAGATGCTCCTGGGATCCCAGCTGCACTGGCCTTTGGACCA 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 CAGGTATCTGACACGCTCCTAGACTGCAGGAAACACTTGACGTGGGTCGTGGCTGTGCTGCAGGAGGTGGCAGC 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 TGCTGCTGCCCAGCTCATTGCCCCACTGGCAGAGAATGAGGGGCTACTTGTGGCTGCTCTGGAGGAACTGGCTT 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 TCAAAGCAAGCGAGCAGATCTATGGGACCCCCTCCAGCAGCCCCTATGAGTGTCTGCGCCAGTCATGCAACATC 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CTCATCAGTACCATGAACAAGCTGGCCACAGCCATGCAGGAGGGGGAGTATGATGCAGAGCGGCCCCCCAGCAA 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 GCCTCCACCGGTTGAACTGCGGGCTGCTGCCCTTCGTGCAGAGATCACAGATGCTGAAGGCCTGGGTTTGAAGC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TCGAAGATCGAGAGACAGTTATTAAGGAGTTGAAGAAGTCACTCAAGATTAAGGGAGAGGAGCTAAGTGAGGCC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 AATGTGCGGCTGAGCCTCCTGGAGAAGAAGTTGGACAGTGCTGCCAAGGATGCAGATGAGCGCATCGAGAAAGT 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CCAGACTCGGCTGGAGGAGACCCAGGCACTGCTGCGAAAGAAGGAGAAAGAGTTTGAGGAGACAATGGATGCAC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 TCCAGGCTGACATCGACCAGCTGGAGGCAGAGAAGGCAGAACTAAAGCAGCGTCTGAACAGCCAGTCCAAACGC 3108
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3109 ACGATTGAGGGACTCCGGGGCCCTCCTCCTTCAGGCATTGCTACTCTGGTCTCTGGCATTGCTGGTGAAGAACA 3182
Query 1 -------------------------------------ATGCCAGGCCCAGGGCTGGTGAAGGACTCACCACTGC 37
.||||||||||||||||||||||||||||||||||||
Sbjct 3183 GCAGCGAGGAGCCATCCCTGGGCAGGCTCCAGGGTCTGTGCCAGGCCCAGGGCTGGTGAAGGACTCACCACTGC 3256
Query 38 TGCTTCAGCAGATCTCTGCCATGAGGCTGCACATCTCCCAGCTCCAGCATGAGAACAGCATCCTCAAGGGAGCC 111
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3257 TGCTTCAGCAGATCTCTGCCATGAGGCTGCACATCTCCCAGCTCCAGCATGAGAACAGCATCCTCAAGGGAGCC 3330
Query 112 CAGATGAAGGCATCCTTGGCATCCCTGCCCCCTCTGCATGTTGCAAAGCTATCCCATGAGGGCCCTGGCAGTGA 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3331 CAGATGAAGGCATCCTTGGCATCCCTGCCCCCTCTGCATGTTGCAAAGCTATCCCATGAGGGCCCTGGCAGTGA 3404
Query 186 GTTACCAGCTGGAGCGCTGTATCGTAAGACCAGCCAGCTGCTGGAGACATTGAATCAATTGAGCACACACACGC 259
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3405 GTTACCAGCTGGAGCGCTGTATCGTAAGACCAGCCAGCTGCTGGAGACATTGAATCAATTGAGCACACACACGC 3478
Query 260 ACGTAGTAGACATCACTCGCACCAGCCCTGCTGCCAAGAGCCCGTCGGCCCAACTTATGGAGCAAGTGGCTCAG 333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3479 ACGTAGTAGACATCACTCGCACCAGCCCTGCTGCCAAGAGCCCGTCGGCCCAACTTATGGAGCAAGTGGCTCAG 3552
Query 334 CTTAAGTCCCTGAGTGACACCGTCGAGAAGCTCAAGGATGAGGTCCTCAAGGAGACAGTATCTCAGCGCCCTGG 407
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3553 CTTAAGTCCCTGAGTGACACCGTCGAGAAGCTCAAGGATGAGGTCCTCAAGGAGACAGTATCTCAGCGCCCTGG 3626
Query 408 AGCCACAGTACCCACTGACTTTGCCACCTTCCCTTCATCAGCCTTCCTCAGGGCCAAGGAGGAGCAGCAGGATG 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3627 AGCCACAGTACCCACTGACTTTGCCACCTTCCCTTCATCAGCCTTCCTCAGGGCCAAGGAGGAGCAGCAGGATG 3700
Query 482 ACACAGTCTACATGGGCAAAGTGACCTTCTCATGTGCGGCTGGTTTTGGACAGCGACACCGGCTGGTGCTGACC 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3701 ACACAGTCTACATGGGCAAAGTGACCTTCTCATGTGCGGCTGGTTTTGGACAGCGACACCGGCTGGTGCTGACC 3774
Query 556 CAGGAGCAGCTGCACCAGCTTCACAGTCGCCTCATCTCC 594
|||||||||||||||||||||||||||||||||||||||
Sbjct 3775 CAGGAGCAGCTGCACCAGCTTCACAGTCGCCTCATCTCC 3813
