Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10771
- Subject:
- NM_001198867.1
- Aligned Length:
- 3721
- Identities:
- 532
- Gaps:
- 3131
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 ATGAGTACGGAGGCAAGCGCCCGGCCCCTGCGGGTTGGCTCCCGCGTGGAGGTGATTGGGAAGGGCCACCGAGG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CACTGTGGCCTATGTTGGAGCCACACTCTTTGCCACTGGCAAATGGGTGGGCGTGATTCTGGATGAAGCAAAAG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCAAAAATGATGGCACTGTCCAGGGAAGGAAGTATTTCACATGTGATGAAGGCCACGGCATCTTTGTACGCCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TCCCAGATCCAAGTATTTGAAGATGGAGCAGATACTACTTCCCCAGAGACTCCTGATTCTTCTGCTTCAAAGGT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CCTCAAGAGAGAGGGAGCCGATGCAGCTGCAAAGACCAGCAAACTGCCTACTCGCCCAGCCAGCACTGGGGTGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CTGGGCCCAGTAGCTCCCTTGGCCCCTCTGGCTCAGCGTCAGCCGGGGAACTAAGCAGCAGTGAGCCCAGCACC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCAGCTCAGACTCCGCTGGCAGCACCCATCATCCCCACACCGGCCCTCACCTCTCCTGGAGCAGCACCCCCACT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TCCATCTCCCTCTAAGGAAGAGGAAGGGCTGAGGGCTCAGGTACGGGACCTGGAGGAGAAGCTGGAGACCCTGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GCCTAAAACGCTCAGAAGACAAAGCAAAGCTGAAAGAGCTGGAGAAGCACAAGATCCAGCTGGAGCAGGTGCAG 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 GAATGGAAGAGCAAAATGCAGGAGCAGCAGGCAGACCTGCAGCGGCGCCTCAAGGAGGCTCGGAAGGAAGCCAA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GGAGGCGCTAGAGGCAAAGGAACGCTACATGGAGGAGATGGCCGACACAGCCGACGCTATCGAGATGGCCACTC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGGACAAGGAGATGGCTGAAGAGCGCGCTGAGTCTCTGCAGCAAGAGGTGGAGGCACTGAAGGAACGGGTAGAC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 GAGCTCACCACAGACCTGGAGATTCTCAAGGCTGAAATCGAAGAGAAAGGCTCTGATGGGGCCGCATCAAGCTA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCAGCTCAAGCAGCTGGAGGAGCAGAATGCCCGCCTGAAGGATGCCCTGGTGAGGATGCGAGACCTCTCTTCCT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 CAGAGAAGCAGGAGCACGTGAAGCTGCAGAAACTCATGGAAAAGAAAAACCAGGAGCTGGAGGTCGTGCGGCAG 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CAGCGCGAGCGTCTTCAGGAGGAGCTGAGCCAGGCTGAGAGCACCATCGATGAGCTCAAAGAGCAGGTGGACGC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 CGCTCTGGGAGCCGAGGAGATGGTGGAGATGCTGACCGACCGGAACCTGAATCTAGAGGAGAAAGTGCGGGAGT 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TACGGGAGACTGTGGGGGACTTGGAAGCCATGAACGAGATGAACGATGAGCTGCAGGAGAACGCACGGGAGACG 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 GAGCTGGAACTCCGAGAGCAGCTGGACATGGCGGGCGCCCGAGTGAGGGAAGCGCAGAAGCGAGTGGAAGCCGC 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CCAGGAGACAGTCGCCGACTACCAGCAGACCATCAAGAAGTACCGCCAGTTGACTGCCCACCTACAGGATGTCA 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 ATCGGGAGCTGACAAACCAGCAGGAAGCGTCTGTAGAGAGGCAGCAGCAGCCGCCGCCAGAGACTTTTGATTTC 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 AAAATCAAGTTTGCTGAGACCAAGGCTCATGCCAAGGCCATTGAGATGGAGTTGAGACAGATGGAAGTTGCCCA 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 GGCCAACCGGCACATGTCCCTGCTGACAGCCTTTATGCCTGACAGCTTCCTTCGGCCAGGTGGAGACCACGACT 1702
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1703 GTGTCCTGGTGCTGCTGCTCATGCCCCGACTCATTTGCAAGGCAGAGCTCATCCGGAAGCAGGCCCAGGAGAAG 1776
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1777 TTTGACCTGAGCGAGAACTGTTCGGAGCGGCCCGGGCTGCGGGGAGCTGCCGGGGAGCAGCTGAGCTTTGCTGC 1850
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1851 TGGACTGGTGTACTCGCTGAGTCTGCTGCAGGCCACGCTGCACCGCTATGAGCATGCCCTCTCTCAGTGCAGTG 1924
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1925 TGGACGTGTATAAGAAGGTCGGCAGCCTGTACCCCGAGATGAGCGCCCACGAGCGCTCCTTAGATTTCCTCATT 1998
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1999 GAGCTGCTGCACAAGGATCAGCTGGATGAGACTGTCAACGTGGAGCCCCTCACCAAGGCCATCAAGTATTACCA 2072
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2073 GCATCTGTACAGCATCCACCTCGCTGAACAACCCGAGGACTCCACCATGCAGCTGGCTGACCACATCAAGTTCA 2146
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2147 CCCAGAGTGCCCTGGACTGCATGGGCGTGGAGGTGGGGCGGCTGCGTGCCTTCTTGCAGGGTGGGCAGGAGGCA 2220
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2221 ACAGATATTGCCCTTCTTCTCCGAGACCTGGAAACATCATGTAGTGACACCCGTCAGTTCTGCAAGAAGATCCG 2294
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2295 AAGGCGGATGCCGGGGACGGATGCTCCTGGGATCCCAGCAGCGCTGGCCTTTGGCTCACAGGTATCCGACACAC 2368
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2369 TCCTGGACTGCAGGAAGCACTTGACGTGGGTGGTAGCTGTTCTGCAGGAGGTGGCAGCTGCAGCCGCCCAGCTT 2442
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2443 ATTGCCCCCTTGGCAGAGAACGAGGGGCTGCCTGTGGCTGCACTGGAGGAGCTGGCCTTCAAAGCAAGCGAGCA 2516
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2517 GATCTACGGGAGCCCCTCCAGCAGCCCCTATGAGTGTCTACGCCAGTCATGCACCATCCTCATCAGCACGATGA 2590
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2591 ACAAGCTGGCCACAGCCATGCAAGAAGGCGAGTATGACGCAGAGCGACCCCCGAGCAAGCCTCCTCCGGTTGAA 2664
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2665 CTTCGGGCTGCAGCCCTGCGTGCAGAGATCACAGATGCTGAAGGTCTGGGTTTGAAGCTTGAGGATCGAGAGAC 2738
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2739 AGTTATCAAGGAGTTAAAGAAGTCACTCAAGATTAAGGGAGAGGAGCTGAGTGAGGCCAACGTGCGGCTCAGCC 2812
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2813 TCCTGGAGAAGAAGTTGGACAGCGCTGCCAAGGATGCAGACGAGCGAATCGAGAAAGTTCAGACACGGCTGGAC 2886
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2887 GAGACTCAGACCCTGCTGCGGAAGAAGGAGAAAGACTTTGAGGAGACAATGGACGCACTCCAGGCTGACATCGA 2960
Query 1 -------------------------------------------------------------------------- 0
Sbjct 2961 CCAGCTGGAGGCAGAGAAGGCAGAGCTCAAGCAGCGCCTGAACAGCCAGTCCAAGCGCACAATCGAGGGGCTCC 3034
Query 1 -------------------------------------------------------------------------- 0
Sbjct 3035 GGGGCCCCCCTCCGTCAGGCATCGCTACCCTGGTCTCTGGCATCGCTGGTGGGGGCGCTCCTGGGCAGGCTCCG 3108
Query 1 ------ATGCCAGGCCCAGGGCTGGTGAAGGACTCACCACTGCTGCTTCAGCAGATCTCTGCCATGAGGCTGCA 68
.||||||||||.|||||||||||||||||.||||||||||||||||||||||||||.||||||||.||
Sbjct 3109 GGCGCCTTGCCAGGCCCGGGGCTGGTGAAGGACTCCCCACTGCTGCTTCAGCAGATCTCTGCTATGAGGCTACA 3182
Query 69 CATCTCCCAGCTCCAGCATGAGAACAGCATCCTCAAGGGAGCCCAGATGAAGGCATCCTTGGCATCCCTGCCCC 142
||||||.||||||||||||||||||||||||||||..|||||||||||||||||.|||||||||.|.|||||||
Sbjct 3183 CATCTCTCAGCTCCAGCATGAGAACAGCATCCTCAGAGGAGCCCAGATGAAGGCGTCCTTGGCAGCTCTGCCCC 3256
Query 143 CTCTGCATGTTGCAAAGCT---------ATCCCATGAGGGCCCTGGCAGTGAGTTACC----AGCTGGAGCGCT 203
||||||||||||||||||| |.||||||||||||| |.||| ||.||| .|||||.||.||
Sbjct 3257 CTCTGCATGTTGCAAAGCTTTCCCTCCCACCCCATGAGGGCCC---CGGTG-GTAACCTAGTGGCTGGGGCACT 3326
Query 204 GTATCGTAAGACCAGCCAGCTGCTGGAGACATTGAATCAATTGAGCACACACACGCACGTAGTAGACATCACTC 277
|||.||.||||||||||||||.|||||||.|.|.||.||..||||.||.|||||.|||||.||.||.|||||||
Sbjct 3327 GTACCGCAAGACCAGCCAGCTCCTGGAGAAACTAAACCAGCTGAGTACCCACACCCACGTGGTGGATATCACTC 3400
Query 278 GCACCAGCCCTGCTGCCAAGAGCCCGTCGGCCCAACTTATGGAGCAAGTGGCTCAGCTTAAGTCCCTGAGTGAC 351
|.|.||||||.|||||||||||||||||.||.||.||||||||.||||||||||||||.|||||||||||||||
Sbjct 3401 GGAGCAGCCCAGCTGCCAAGAGCCCGTCAGCTCAGCTTATGGAACAAGTGGCTCAGCTCAAGTCCCTGAGTGAC 3474
Query 352 ACCGTCGAGAAGCTCAAGGATGAGGTCCTCAAGGAGACAGTATCTCAGCGCCCTGGAGCCACAGTACCCACTGA 425
|||.|.|||||||||||||||||||||||||||||||||||..|||||||||||||||||||.||.|||||.||
Sbjct 3475 ACCATTGAGAAGCTCAAGGATGAGGTCCTCAAGGAGACAGTGACTCAGCGCCCTGGAGCCACTGTGCCCACCGA 3548
Query 426 CTTTGCCACCTTCCCTTCATCAGCCTTCCTCAGGGCCAAGGAGGAGCAGCAGGATGACACAGTCTACATGGGCA 499
|||||||||.|||||||||||.||||||||||||||||||||.||||||||.||||||||||||||||||||||
Sbjct 3549 CTTTGCCACTTTCCCTTCATCTGCCTTCCTCAGGGCCAAGGAAGAGCAGCAAGATGACACAGTCTACATGGGCA 3622
Query 500 AAGTGACCTTCTCATGTGCGGCTGGTTTTGGACAGCGACACCGGCTGGTGCTGACCCAGGAGCAGCTGCACCAG 573
||||||||||.|||||.|||||.||..|.||||||||||||||.||||||||||||||||||||||||||||||
Sbjct 3623 AAGTGACCTTTTCATGCGCGGCAGGCCTAGGACAGCGACACCGCCTGGTGCTGACCCAGGAGCAGCTGCACCAG 3696
Query 574 CTTCACAGTCGCCTCATCTCC 594
|||||||||||||||||||||
Sbjct 3697 CTTCACAGTCGCCTCATCTCC 3717
