Nucleotide Global Alignment

Description

• Query: ccsbBroad304_10775
• Subject: NM_004403.3
• Aligned Length: 1488
• Identities: 885
• Gaps: 603

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ATGTTTGCCAAAGCAACCAGGAATTTTCTTAGAGAAGTTGATGCTGATGGTGACCTGATTGCAGTATCAAATCT  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAATGACTCTGATAAGTTACAGCTTCTAAGTCTGGTGACAAAAAAGAAGAGATTCTGGTGCTGGCAGAGACCCA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  AGTACCAGTTTTTATCCCTCACCCTTGGCGATGTACTCATAGAAGACCAATTTCCGAGTCCAGTGGTCGTGGAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TCGGACTTTGTGAAATACGAGGGCAAGTTTGCAAACCACGTGAGTGGAACCCTGGAGACTGCACTGGGGAAGGT  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  CAAGCTGAACCTGGGGGGCAGCAGCCGCGTAGAGAGCCAGTCTTCATTTGGAACCCTGAGGAAGCAGGAGGTGG  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  ATTTGCAGCAGCTCATCAGAGACTCTGCCGAGAGAACAATAAATCTGAGAAACCCTGTGCTCCAGCAGGTGCTG  444

Query    1  ------------------------------------------------ATGCAGAAGTGTGTGATCTCTGAGCA  26
                                                            ||||||||||||||||||||||||||
Sbjct  445  GAAGGAAGGAATGAGGTCCTGTGCGTTTTGACACAGAAGATCACGACGATGCAGAAGTGTGTGATCTCTGAGCA  518

Query   27  CATGCAGGTCGAGGAGAAGTGTGGTGGCATCGTGGGCATCCAGACCAAGACGGTGCAGGTGTCAGCGACGGAGG  100
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  519  CATGCAGGTCGAGGAGAAGTGTGGTGGCATCGTGGGCATCCAGACCAAGACGGTGCAGGTGTCAGCGACGGAGG  592

Query  101  ATGGGAATGTCACCAAGGACTCCAACGTGGTGCTGGAGATCCCAGCTGCCACCACCATTGCCTACGGTGTCATT  174
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  593  ATGGGAATGTCACCAAGGACTCCAACGTGGTGCTGGAGATCCCAGCTGCCACCACCATTGCCTACGGTGTCATT  666

Query  175  GAGTTATACGTGAAACTGGACGGCCAGTTCGAGTTCTGCCTTCTCCGAGGGAAGCAAGGTGGCTTCGAGAACAA  248
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  667  GAGTTATACGTGAAACTGGACGGCCAGTTCGAGTTCTGCCTTCTCCGAGGGAAGCAAGGTGGCTTCGAGAACAA  740

Query  249  GAAGAGAATTGACTCTGTCTACCTGGACCCCCTGGTCTTTCGAGAGTTTGCATTCATAGACATGCCAGATGCTG  322
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  741  GAAGAGAATTGACTCTGTCTACCTGGACCCCCTGGTCTTTCGAGAGTTTGCATTCATAGACATGCCAGATGCTG  814

Query  323  CGCATGGGATATCTTCCCAGGATGGACCATTAAGTGTTTTAAAGCAAGCGACCCTGCTCCTGGAGAGGAATTTC  396
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  815  CGCATGGGATATCTTCCCAGGATGGACCATTAAGTGTTTTAAAGCAAGCGACCCTGCTCCTGGAGAGGAATTTC  888

Query  397  CATCCATTTGCGGAGCTGCCTGAGCCACAACAGACAGCTTTGAGTGACATCTTCCAGGCGGTCCTATTTGATGA  470
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  889  CATCCATTTGCGGAGCTGCCTGAGCCACAACAGACAGCTTTGAGTGACATCTTCCAGGCGGTCCTATTTGATGA  962

Query  471  TGAACTACTCATGGTCCTGGAACCAGTGTGCGATGACCTGGTCAGCGGCCTCTCGCCCACAGTGGCGGTGCTGG  544
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  963  TGAACTACTCATGGTCCTGGAACCAGTGTGCGATGACCTGGTCAGCGGCCTCTCGCCCACAGTGGCGGTGCTGG  1036

Query  545  GGGAGCTGAAGCCCCGGCAGCAGCAGGACCTTGTGGCCTTCCTGCAGCTGGTGGGGTGCAGCTTACAGGGTGGG  618
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037  GGGAGCTGAAGCCCCGGCAGCAGCAGGACCTTGTGGCCTTCCTGCAGCTGGTGGGGTGCAGCTTACAGGGTGGG  1110

Query  619  TGTCCGGGCCCCGAGGATGCAGGCAGCAAGCAGCTGTTTATGACAGCCTACTTCTTGGTCAGTGCCCTCGCAGA  692
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111  TGTCCGGGCCCCGAGGATGCAGGCAGCAAGCAGCTGTTTATGACAGCCTACTTCTTGGTCAGTGCCCTCGCAGA  1184

Query  693  AATGCCAGATAGCGCAGCAGCTCTGCTGGGCACTTGCTGCAAACTCCAGATCATTCCCACACTGTGCCACTTGC  766
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185  AATGCCAGATAGCGCAGCAGCTCTGCTGGGCACTTGCTGCAAACTCCAGATCATTCCCACACTGTGCCACTTGC  1258

Query  767  TTCGTGCTCTGTCTGATGATGGAGTATCTGATCTTGAAGACCCAACCTTGACTCCCCTGAAAGATACAGAAAGG  840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259  TTCGTGCTCTGTCTGATGATGGAGTATCTGATCTTGAAGACCCAACCTTGACTCCCCTGAAAGATACAGAAAGG  1332

Query  841  TTTGGGATTGTGCAGCGCTTGTTTGCCTCAGCTGACATTAGTCTG-----------------------------  885
            |||||||||||||||||||||||||||||||||||||||||||||                             
Sbjct 1333  TTTGGGATTGTGCAGCGCTTGTTTGCCTCAGCTGACATTAGTCTGGAGAGACTGAAGTCATCTGTGAAAGCTGT  1406

Query  886  --------------------------------------------------------------------------  885
                                                                                      
Sbjct 1407  CATTCTGAAGGACTCTAAAGTCTTCCCACTGCTTCTTTGTATAACCCTGAATGGACTCTGTGCTTTAGGCAGAG  1480

Query  886  --------  885
                    
Sbjct 1481  AACATTCA  1488