Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10792
- Subject:
- NR_024456.1
- Aligned Length:
- 2453
- Identities:
- 218
- Gaps:
- 2204
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCCTCATTTTTCCCGGCTCCTATTTAAGATGGAGTTGCTCTGGTTCACACACCTCTGACATGATCATTGCCCAC 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TGCGGCTTCCACCTCCCGGGTTCAAGAGATCCTCCTGCCTCACCCTCCCAAGGTGCTGGGACTACAGGTGTGTG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CCACCAGCTCAGCTAATTTTTGTATTTTTTGTAGAGATGGTGTTTTTCCATGTTGCCCAGGCTGGTCTCAAACT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 CCTGGGCTCAAGCAATCCTTCTGTCTCAGCCTCCCAAAGTACTGGGATTACAGGCATGTCCCACCATGCCCAGA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTAATATTTACTTTTAATCAGACTAAGATAGGGTTACTACTTGAGTTGCTATGGCTCCAGCTGAAAGAAAGCCC 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GTGCAGTCATATCACGCGTAAACATTTGCTTTATGCTAAAAATATGGTGGACCTGGCATTACAGCTATTACAAA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCTCCTAAGATGTCTCGGGTAGTGTATTAGTTACTTTTCATACTGCTATGAAGAAATACTGGAAACTGGGTAAT 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TTATAAAGAAAAAGAGGTTTAATGTACTCACAGTTCCACAAGGCTGGAGAGGCCTCAGAATCATGGTGGAAGGC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAAGAAGGAGCAAAAAGGTATGTCTTCCATGGCAGCAGGCAAGAGAGCACGTGCAGGGAAACTGCCCTTTATAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AACCATCAGATTTAGTGAGATGTATTCACTATCACGAGAACAGTATGGGAAAAACCTGCCCCCATGATTCGATT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACCTCCTACCGGGTCCCTCCCACGACACATGGGGATTATGGGAACTACAATTCAAGATGAAATTTGGGTGGGGA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 CGCAGCCAAACCATATCGGGTAGCAACAACCTAGGGTCAGTTTTGCAGGTGGTAAAGCCATTTACCAAGATAGT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TGTAGGTAAAGAAGGGCAGATTTATTAGAGAAATTGTGAAAATATGTTGCAGTGGGCAGCTCAGCAGAGAAGGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GCTACCTGCAAAGAGGCAAGGGCTGGAGGAAAGTTTTATAGGGTCCTGCTGAAGGGTGCTACGTGTGGAATGAG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GTCATTGTGCCCGCAGGTTGTTTGTGATTAGCTGTCTCTAACAATTGTTCATACAATAATTGTTCATTATTGTT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 CTCAACTTGGGGCTCTCCCCAACCTGGGGACCCTTCCTTATTGTTGCTTACTTATCAGGTCTCCACATAAAGGT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 GTGGAAACTTCATTCATTCATATCTTCAACACAAATTGTAGGTAGCCTGTTTTTTAAAACATTTATTCAACAAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 TATTTAGTCCAAGCCACTATTACTTACTACCTTCTCTACTATTGTATGGACTTTTAACTATCTCTGACACTATT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CACTATTCTTCCACATTCTCTATTATTTATACCTATGGTAAAATTTGCCAGTTTGACCATACAACTAATACTCA 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 CAGGGAATATATAGAGTCTAGAAGAAAATATACAGGTCCTTAAAGGCTGCCCTGCCAACAAAACCATAACGCAG 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 GAACAAACATCACAACTATGCCAAATAATCAATCCTACAATGTCCAAAATTTTACTTTAAAACTGGAATTACCA 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 GACTTCCTTTCTGCATTAACCAGTTTAACTAGACAGTAACGAAATATTCCTACTTTATGCTGTGATAGTTTGTT 1628
Query 1 ------------------------------------ATGGAGTCTCGCTC-TGTTGCCCAGGCTGGAGTGCAGT 37
|..||||.|||||| |||||||||||||||||||||||
Sbjct 1629 TGTTTGTTTGTTTGTTTATTTATTTATTTATTTAAGACAGAGTTTCGCTCTTGTTGCCCAGGCTGGAGTGCAGT 1702
Query 38 GGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGC 111
|||..||||||.||||||..|||||||.|||||||||||||||||||||||.||||||||||||||.|||||||
Sbjct 1703 GGCACGATCTCAGCTCACCACAACCTCCGCCTCCCAGGTTCAAGCGATTCTCCTGCCTCAGCCTCCCGAGTAGC 1776
Query 112 TGGGACTATAGACATGCACCACCACGCCCGGCTAATTTTGTATTTTTGGTCGAGAC--GGGGTTTTGCCATGTT 183
|||||.||.||.||||.||||||||||||||.|||||||||||||||.||.||||| |||||||..|||||||
Sbjct 1777 TGGGATTACAGGCATGTACCACCACGCCCGGGTAATTTTGTATTTTTAGTAGAGACGGGGGGTTTCTCCATGTT 1850
Query 184 AGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGAT-CCACCACCTCGGCCTCCCAAAGTGTTGAGA------- 249
.|||||||||||||.|||||||.|||||||.||||| ||.|..||||.|||||||||.|||.||.||
Sbjct 1851 GGTCAGGCTGGTCTAGAACTCCAGACCTCAGGTGATACCCCTGCCTCAGCCTCCCAATGTGCTGGGATTACAGC 1924
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1925 TGTGAAGCCACCGCGCCCGGCTGCTGTGATAGTTGAGATGTAAACCAAAAATAAAATTCTAAGCCACCCAGTCC 1998
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1999 GACTGAATGGACCCTTCCTGTTGAGCAAGGACATTCCAAAGTAAACTGAAAAGACCAGCTTAGGCCATGATGGG 2072
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2073 AAGGGGAGGTGTCAACATGCCTCATTCTACCTTCCTCCCTCTGGAATCCAGACACAACTGACCAGCATTAACAT 2146
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2147 TAAAACAGAGATCTTAAGCTGGGCACAGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGGCCAAGGTGGGAT 2220
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2221 CACCTGAGGTCAGAAGTTCAAGACCAGCCTGGCCAGTATGGTGAAGCCATGTCTCTACTAAAAATACAAAATTA 2294
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2295 GCCGGACATTGTGGTGCACGTCTGTCATCCCAGCAAGGCAGGCGAATCACTTGAACCCAGGAAGCAGAGGTTGC 2368
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2369 AGTGAGCCAGGATCATGCCATTGCACTCCAGCCTGGTCAACAGAGCGAGACTCCGCCTCATTAAAAAAAAAAAA 2442
Query 250 ----------- 249
Sbjct 2443 AAAAAAAAAAA 2453
