Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10792
- Subject:
- NR_103831.1
- Aligned Length:
- 2855
- Identities:
- 217
- Gaps:
- 2611
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGTGCAAACCAGTCCGGCTGCTTTAGAAACAAGTTGTTTTCTGCTTCCAGAACCACCCAGGAGCCTGCGTGATG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCTCTTCCCCCACCCGACCCCCTCTTCCCTCTGCCGGTCTCCTTGCTCCAGGATCTGCACAAGCAGAGGCGGCA 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGGGTTTGGCTTCCAGTTGGGAAATGAAGCTCCAAGGGCAGCCCTACTATGGCGGGCTGTGTGACCTGGGCCA 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGCCCCTTGACATCTCCAGACTCGGCTTCCACATCTGCCACCACCAGGACACTGGATTGAATGTTGGGTACGTT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GTAAGGCAAGGGAGACACAGAAGTCCTAAAGGCAATAAAGCTTTTCCCCACTGCCCCTCCATCTGGACGAGTCT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 CCTGCCAAGCATCTTCAAGTCCCACTTTGAAACACGATTCTGCCACCTTCCTGTTCTGAGGATCTGGGAAAGCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGGGGGAAGGGGCTATTGGGAGTCCCGCTTGCTCCAGGCCCAGACCAGGAGGCTCAGGCAGGCTTATCTACTTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 TGATGTGGTGGGGGGCCCAGGATGCTGCCAGGGTCTCACAGCCATGGTCTCACAGCCACTATCAGCCTGTCCTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 AAGGGTATAAGAGAAGCTGGAAGCCTAGATGGGCACTGCCCTCAGGCAACTTCCAATCCAGCCAAGAAGAATAA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AGAGTAACACACAAAATATTGGGGGCATGAGGCAATAACTGTGGGTACACCTATAAAAACCTCTAATTGGGCTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 ACCTGGTACCAGACAGTATTTTAATTGGATCATATATAGTGCATTAATTCAGTTAATATTCACAACACCCCTAT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GAGGTAGCTACAATTATTATCCCCATTCGATGATGGGGAAAACTGACATCAGAAGAGGTCAACTTGCCCAAGTT 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCCAGAGCTGAAAAGCAACAGAGCTGAGATTTCACTGCAGGTATTCTGGCCCCAGAGTCTTGGTACAAATAGTG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 TTAATGAACAAGTCTTCTTCTGGTAAGAGCACCCCAATTTTCCTTTGGAGAACCTCCACTTCCTCATTTCATGT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 GCCATGGGTGACCCTACCCTTGAGCTCTTGAGGTGAACACATGGACACACGATCCAGTCCTGACCAAACAGAAT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATCTCACTTCCCTGGCTACAGTTAGTGATAGGTTCAGGATTGTAGCAATGACCCAAGACTGGCTTCTGAGAGTC 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 ACATTTGAGACTGTGGCTCAAACTCTTAGAGAAGCACTCGTTTTTCAACTGAGACACTACAGTCTTTACTACTC 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CTTGAAGACGGACTACCAGGAAGAAAGCCAACCTAGAGGGCTGCAAAGCTGAGCAGTGGAGAACAGCAAGTTCC 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 TGATGACATTGTTTGATGGCCTAAACCCCATTATACTTCCACTGGTTATCTCCCTGGACTTTCCTGTTACACAG 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AAATTATCCCTTTTGTGTTGAAGCCAATTTGAATTGGATATCTGTCACTTACAACCAAAAAGGTCCAAATGTGC 1480
Query 1 --------------------------------------------------------------------ATGGAG 6
|..|||
Sbjct 1481 TAGTGAACACAGAGCACATACTGTGAGCAACTACTCTTTTTCTTCTTTCTTTCTTTCTTTTTTCTGAGACAGAG 1554
Query 7 TCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTG--ATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTC 78
|||..||||||..|||||||||||||||||||| || ||||||||||||||||||||||||||||..|||||
Sbjct 1555 TCTTTCTCTGTCACCCAGGCTGGAGTGCAGTGG--TGCAATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTC 1626
Query 79 AAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAA-TTTTG 151
|||.||||||.||||||||||||||.||||||||||||.||||||||.|..||||||||||||||||| |||||
Sbjct 1627 AAGTGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGATTATAGACACGTGCCACCACGCCCGGCTAATTTTTG 1700
Query 152 TATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATC--CAC 223
||||.||.||.||||||||||||..|||||||.|.|||||||||||.||||||||||||| .|||||| | |
Sbjct 1701 TATTCTTAGTAGAGACGGGGTTTCACCATGTTGGCCAGGCTGGTCTCGAACTCCTGACCT--TGTGATCTGC-C 1771
Query 224 CACCTCGGCCTCCCAAAGTGTTGAGA------------------------------------------------ 249
|||||||||||||.||||||.||.||
Sbjct 1772 CACCTCGGCCTCCTAAAGTGCTGGGATTACAGGTGTGAGCCACCGCGCCCGGCCCGAGCACCTAAGCTTTTCAA 1845
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1846 GACATTTCCAGAAAAACAAATGCAGGTAAGAAAGGATCAGTCTTCAAAGAACTTGGAAGCTGGTGAGGGATTAC 1919
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1920 AAAGATTCTCAAATAACTTTAAAACAAGTCAGAACACAATTGACAGCACAAGGCAGCTACCCGGGTTCTCTGGT 1993
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1994 TAATGCAAAGGGTGAGAATTTTCTATATTGGATGGAACACATCAGAAAAGTTCTCACGAAGGTGGTAGCAGTGA 2067
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2068 AATTGGCCTCAGAAGTCTGATAGGATGTTGGCAGGTGAAGGCAGGGAAGCTACAGGGCAGACAGCATGAGGAAG 2141
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2142 GGCCCAGGTTCAGGGAAGTATGGGCATGCAGGGGCAAGTGTAAATTGATGGGATTGCCTGGGACCAGAGGAAAG 2215
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2216 GTCTAAAACGTACAGTCTGAGGCTGGGGCGGGGTGGGGAAAGGATGGTTCTGAGGTATCTGAAGTATCTCCAAA 2289
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2290 TATCTGAAGATATTCCCCATGGAAAAGAAACTAGGCTTATTTGGAGTGACCCCAGAGGACAAGACTACGACTAA 2363
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2364 AAATGGACGCTCGCAAATGGAGGAAGTAGACCTGACCCCTGACTAAGGAAGATGGTGCTACCTGTTTGGGGCAA 2437
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2438 ATGTTCAAAAAGAGGCTGTGTCTGTATGGTGGATGCTGTTAAAAGGGACTCAGAAACCAAATGAGAGTCTGAAT 2511
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2512 TAGCTGAGTTTAACATTCTGTGAGTTTTGTGCCAGACTTGGGACTACTGCAGAAGACCCTGGGAGAGTTGGGAT 2585
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2586 TGAATTCCAAAGGCAGTGCTGATGGACACTGACTTGAGGAGCCAGGAAAGAAGGCAGGAACAGTGGTGGGGATC 2659
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2660 ACAGCCTCACCTGTATCTGTGCACTTCTATAAATTCACAGACTGGGAATTTTTAATGTGAACTGGATATTAGAT 2733
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2734 GATGACCAGGAATTGTTTTAATTCTGTTAGGTGGGATAATACCATTCACTGTGCTGTGTAAGATAATGTCCATA 2807
Query 250 ------------------------------------------- 249
Sbjct 2808 TTGTTTAGAGATGCATACTGAAGAATATAGGATGAAATGACAT 2850
