Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
NR_109996.1
Aligned Length:
3487
Identities:
216
Gaps:
3240

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  ACTAGATGACCCGCCCCCTCGGGCTGTCGGGGGGTCGAGACAGTGGAGTGTTCCTGATGCCAGCTCACGGAGGG  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  AATCCAGGGAATTAGGTAATGAACGGTCTACCCATGAAGGGGACCGATTAGTGCCTCTCGCCTGGTCCTGAAGA  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CCTTTAAATTATTCTTTCAGCTGATGCCAAGAGCCTCTTTTTGGCCAGCACTTACTAAGCACCAGAGACACAGC  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  GAGAAGCAGAAGCATACGAGCACATCAGTGTGATTCTGCTGTGATGAAGGGCAAGAGAGGGCTCACTTTCCGGC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  GTGACATTCAAGCTAGCCCCGAGGCCTGAGCAGGACCCGCCCAGGGGAAGATCTGGAGGAAAGCCATCTGAACA  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  TACAACAAGAGCAAAGGCCTGGTGGAGTCAAGACCACCTTGGCTGCCAGGTGGAATGGTGGAATAACTCAGGAG  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TCTGTCAGGTCTCTGAGATGTCAAACGGGCTTGGCACACACCCAGGAGCTCAATGCTGCTGGGAGCTGAGCAGC  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  TGGGAGCAAGGAGCCCTCATCCCCACTGATGAAGAGGCCAGCCCAGGTTCTAGGCTAAGCAGGCCTGTGATTAT  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AAACAGCAGTGTCTCCCTGGACAAGTTTCTTGACCCTGAGAAGAATGTTAGACCATCAACTTTGTGAGGGGACA  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  GGCAGTCTCCAACTTTTTTCCTGCTCAGTCCTTATTGCATACTCTTGGAGAAGGTCTACTGACTTGTTCTCAGA  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  TGCCCCACGGCTCAGCCAACCACCCATCCAGCAGAGCATTCAAAAGGCATCTGGAAGGAATGAGGGCGACCGTT  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  CTGCCAGGCCCCTATTTTTTTTTGAGAGGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAATGGCATGACCTCT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  GCTCACTGCAAGCTCTGCCTCCCAGGTTCAAGCGATTCTCCTGTCTCAGCCTCCCAAGTAGCTGGTACTACAGG  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  CGTGCACCACCACACCCAGCAAATTTTTTCTATTTTTAGTAGAGATGGGGTTTCTCCATGTTGGCCAGGATGGT  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CTCAATCTCTTGACCTCGTGATCCACCCGCCTCAGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCACCGCA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  CCTGGCTTTTTTTTTTTCTTTTAGATGGAGTCTTCCTTTTGTCGCCCAAGGTGGAGTGCAATGGCACGATCTCA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GCTCACTGCAACCTCCACCTCCCAGGTTCAAGCAATTCTCCTGCATCAGCCTCCTGTGTAGCTGGGATTATAGG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CACCTGCCACCATGCCCAGTTAATTTTTGTATTTTCAGTAGAGACGGGGTTTTGCCATGTTGGCCAGGATGGTC  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TCGAACTCCTGACCTAGGGATCTGCCCGCCTTAGCCTCCCAAAGTTCTGGGATTACAGGCGTGAGGCACTGCAC  1406

Query    1  ----------------------------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGC  40
                                              |||||||||.||||||||||||||||||||||||||||||
Sbjct 1407  CTGGCCATTTTGTTTGTTTGGGTTTGTTTTTGAGATGGAGTCTTGCTCTGTTGCCCAGGCTGGAGTGCAGTGGC  1480

Query   41  CTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGG  114
            .||||||||||.||.|||||.|||..||||||.||||||.||.|||||.|||||||||||||||||||||||||
Sbjct 1481  ATGATCTCGGCCCATTGCAAGCTCCACCTCCCGGGTTCATGCCATTCTCCTGCCTCAGCCTCCAGAGTAGCTGG  1554

Query  115  GACTATAGACATGCACCACCACGCCCGGCTAA--TTTTGTA-TTTTTGGTCGAGACGGGGTTTTGCCATGTTAG  185
            |||||.||.|.|||.||||||.||||.|||||  ||||||| |||||.||.||||||||||||..|||||||||
Sbjct 1555  GACTACAGGCGTGCGCCACCATGCCCAGCTAATTTTTTGTATTTTTTAGTAGAGACGGGGTTTCACCATGTTAG  1628

Query  186  TCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACC-ACCTCGGCCTCCCAAAGTGTTGAGA---------  249
            .||||.||||||.||..|||||||||||  ||||||.|| .|||.||||||||||||||.||.||         
Sbjct 1629  CCAGGATGGTCTGGATTTCCTGACCTCA--TGATCCGCCTGCCTTGGCCTCCCAAAGTGCTGGGATTACAGGCG  1700

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1701  TGAGCCACCACGCCTGGCCTGTTTGTTTTTTTGAGACACAGTCTTACTCTGTTGCCCAGGCTGGAGTGCAGTGA  1774

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1775  CGCGATCTCGGCTCACTGCAACCTCCACCTCCCAGGTTCAAGCGATTCTCGTGTCTCAGCCTCCCAAGTAGCTG  1848

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1849  GGATTATAGGTGCGCACCACCACGCCCGGCTTATTTTTTGTATTTTTAGTGCAGATGGGGTTTCACCATATTGG  1922

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1923  CCAGGCTGGTCTTGAACTCCTGACCTCAGGTGATCCGCCTGCCTCAGCTTCCCAAAATGCTGGGATTACCAGCA  1996

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1997  TGAGTCACCACGCCCGGCCAAGAAAGACCCATATTTTGTTTTGTTTTCTTTTTTGAGATGGAGTCTTGCTCTGT  2070

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2071  CGCTCAGGCTGGAGTGCAGTGGCGCAATCTCTGCTCACTGCAACCTCCACCTCCTGGGTTCAAGCCATTCTCCT  2144

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2145  GCCTCAGCCTCCCGAGTAGCTGGGACTACAGGCGCACACCACCACGCCTGGCTAATTTTTGTATTTTTAGTACA  2218

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2219  GACAGGGCCAGACTGGTCACGAACTCCTGACCTCAGGCGATCCACCCGCCTCAGCCTTCCAAAGTGCTGGAATT  2292

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2293  ATAGGTGTGAGCCATCGCACCTGGCCACCAGACCCCCATTAACTTCAGTAGGGATGGCACCAGGTTTGAGAGGC  2366

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2367  CAAAAGAGATCCAGAGCCAGCAAACAAGACTTAGGTTTGATTGAGGGGAATTTGCATACAGAGCAGTCCAGTGG  2440

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2441  AGGTGGGCTAGATAGGAGAACTGCCCCACCTGCAGAAAGTATGCAGTATATATAGCATTTTCACTTAACACCCT  2514

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2515  CCCCCTAACAACTTTGATTTAACCCAAAACAAAGGGGCTAAATCCCCTGTACATCCACAGGACAGAATGGGGGC  2588

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2589  TCAGATATTCCTCATGGGTAAGTAATGAATCTCTGGCTTGTCCTCACTTGGAACTCCTAACACATTCAGGTGCA  2662

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2663  TCTGCCATACAGGGTCATTCTCAGAGTATGCTTAAGTTATTGCTGTCAGGTGCAGCTACCATACACAGGTGTGT  2736

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2737  CTGCCATATAGCCACAGAAAGCAGGAGTCCTACAGCTGCTCCTCATGGGTCTCCATAGACTAGTCTTAGAGCAA  2810

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2811  GGATGGGCAGCCAGCCTCCAGGTTTAACCTGGCACTCTCCCCCAGCACTTGGTCCCCAGAGCAGGGGTGCATCT  2884

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2885  CTCCCACTTCTGGTCAACCCTTCAGTAACAAGTAGAGCCCCCAGGGTCTTCATGAATATCTAGTTGAACTGGCT  2958

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2959  AAAGAAGAGGGCCCTGTAACAGGACAGAACACCAGGAGCCTGAACCCCGCATCTTCTACCCTTATCCTGCATTT  3032

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3033  ATCCTGCCTGCATTCAAGCCTGTCCAGCTGCACCACTGGAGGTTACCATGGCAACTAAACCCAGAGGCAGCCGG  3106

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3107  TAACTGAGATACAGCTGCCAAGAGCAACTGATGGTGGAAAAGGCCAACAGCAGAGACTCTTAGAAGGAAGAGAA  3180

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3181  GTACACAGGAGGAGGCCCCAGAACCCTGAGGGTGCTACACTCAAATCTAATCCTACTCACAACTCAGCAGGCAG  3254

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3255  TCAACGTCTTGCACAAACTGCCATATCACCAACCAGAGGCACAGATATGGACACAATGGGGCCAATTTGCAGAG  3328

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3329  ATGTTTGCAACTATGGATGCAGAGTAGCACAGGTGGGACACATGTTGTTTAGCCCAAAAGCAACGGGTCTTGGT  3402

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 3403  GAAAACGAAAATGGGTAGGGTACCATTGCTGTTTCCAATGAAACAATGAATTTTGTGTGCTCTTGAAAAAAAAA  3476

Query  250  ---------  249
                     
Sbjct 3477  AAAAAAAAA  3485

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