Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10792
- Subject:
- NR_110090.1
- Aligned Length:
- 2798
- Identities:
- 218
- Gaps:
- 2551
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TCATAAGATCACCCAACTATGGATTCCATTTGGAACTGCGTGTACATGCATGACTGAGTTAGCTGTGGACATGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 TCACACGCCTTCCATACATCTCTGATTATAGAAGATATTTTTTGCCCTCCATTTCCTATATTTACTCTTCCAGC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AGACAGGGACATGGAAAAATCCGTGACCTAGCACTGACCCAGCAGATAAGACTAACCACCATAAGTACAGTTTT 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 TGAAAGAAAATGAAGTAGTTAAGGCTAAAGCTTTAACATGGAGTCAAGCGTTTGTAAGAGCATTGCACTCACAC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTGCTAAAGGTCAAGCCACAGGATGTTGCTGTAGACCTGGATAACAATGGACTGAAGTCAAGGAGTTCATGATG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATCACCATTCTACAGAAGAGGAAACTGAGGCTGGGAGAAATGAAGGCACTGTCTCCTTGTCCTCCATGTGTCCC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 AGTGGGCACCTTCTGTGTCCCACCAAGCATTCATGTCCATTAACAGAGCAAGTGCCCTGAATTCTTGAGCCCCA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACACTGACTGCACACCCAATTGTCCCTTCGAGATTCTTGACTTCATGCAATTCAAGGGAGAAGCCTCCCTCCTG 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 GGTGCCCAGGCCCAGATACACTGTGGCCAGAAACAAAACACTGTAGGCTCCTGTCAGCCTGAGGGGAGCATGGA 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 AACTTGCTCCTATGGGCCCCACGCACCCCGTAGGAAATACCTCATCTCCTCATCCTTAGTCCTCAGCACCAAGA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGAGGTGGGCATGTGCTCCGCTGAGCTGCAGGAGGCCCAGCTCTGCTCCATAGATGCTGCTGAGTGAAGGAGAA 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 ACAGCACAACATGGGGGGAGAGTCCTAAACGCTTCATGTGTGCTGAGACCTGTCTTTTAGAAACAGGCTTGACA 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TATAGTGAACCATCTGCAGAACCTTTCTAATGAGAGGGTAAAGCCAGCCCCTCCTACCCCTACAGGACTTTTTT 962
Query 1 ----------------------------ATGGAGTCTCGCTC-TGTTGCCCAGGCTGGAGTGCAGTGGCCTG-- 43
|||||||.|.|||| |||||||||||||||||||||.||| ||
Sbjct 963 TCATTTGTTTTGTTTTGTTTTGTTTTTGATGGAGTTTTGCTCTTGTTGCCCAGGCTGGAGTGCAATGG--TGCA 1034
Query 44 ATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGAC 117
||||||||||||.||||||||.||||.||||.|||||.|||||||.||||||||||||||.||||||||||||.
Sbjct 1035 ATCTCGGCTCACCGCAACCTCCGCCTTCCAGTTTCAAACGATTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGAT 1108
Query 118 TATAGACATGCACCACCACGCCCGGCTAATTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGC 191
||.||.|||||.||||||.|||.|||||.||||.|||||||.||..||.||||||||..|||||||.||.||||
Sbjct 1109 TACAGGCATGCGCCACCATGCCTGGCTACTTTTTTATTTTTAGTAAAGGCGGGGTTTCTCCATGTTGGTTAGGC 1182
Query 192 TGGTCTTGAACTCCTGACCTCAAGTGATCCA-CCACCTCGGCCTCCCAAAGTGTTGAGA--------------- 249
||||||||||||||||||||||.|||||||| |||||||||||||||||||||.||.||
Sbjct 1183 TGGTCTTGAACTCCTGACCTCAGGTGATCCACCCACCTCGGCCTCCCAAAGTGCTGGGATTACAGGCATGAGCC 1256
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1257 ACTGCACCCAGCCTCAGTTTCGTCTTTAATGCTTTTCGCTATAGAACTGAACAATGCCAGAGTCCGGAAAGAGA 1330
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1331 AGGTTGGAGCATTTCTCTACACTTGAAAAACCACATCTGAGTGAGTGTTGCAGAGACAGGGGCTGTAAGTCAGG 1404
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1405 CTGGTGGGGAGGAAATCTTGGCTCCCTGACCTGCTCACCACTCAGATCTCCTCTCTGAGCCTCAGTGTCCTCAT 1478
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1479 CTTTAAAGAGGCAACAAATGGCTCCGCCCTCATAGCACTGGTTATAAGCAGACTTTGGCACAACTGCCACTCCC 1552
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1553 TGGCCCCCTTCCCTGCCTCCCTCCTTTCTCATCCAGGTCATCATTTAGGCTGAGAGCATGGCAAAGAGGGGTGA 1626
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1627 GCACCATACTAGGAGTTAGCATATCTGAGTCACACCTGAGCTACTTTCTGGCTGTGACTGCCTGGGCTGGGGAG 1700
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1701 GCACCATCTGGAAACTTCGGTGTCTTTGCCTATATTATCTGATCAGGGTAAATCCACTTCCACATCTATGTTCA 1774
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1775 AGGGTGGTGGGGAGCCCTGTTGCTATGTCATCTAGGAGGGAAATTAGATAATATTCTCATATATGAAAATACAC 1848
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1849 ACACCCTCTGACTTAGCAATGTCACTTCCAGTGGGTGTCTCCCACCTGAGGAGGGTGATACATGTACAAGGCCA 1922
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1923 TCCACTGCAGGATTGTTAGTAGCTCAAGTTTGGGAACAACTTACATACCCATCAACAGAATGCTGTGAAATAAA 1996
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1997 TTTTGATATTTCCATAAATTGGAGTGTTCTGCAGCTGCTAAAGAGTGGAGCAGTTCTATGTCCTGACGTGGAAT 2070
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2071 CTCGATACGGAATGTTAGGGCTTATGTTTGGAAGAAGTTTTCCAATCACCAATGGGCTTTAGTGTCTGAATGTG 2144
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2145 AGGTGCATTCTGAACCTTTGGGAAATGGATGAAAAAAGAAATCCTGGCTCCCTGATCCATGGTTCTGTTTGAGG 2218
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2219 AGCTTTTATTTAGTACCTGTGATGCACCAGGTTCTTCTATGAAGACAGTGTCTAACAAACACTGGGGAAGGAAG 2292
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2293 GAGCCTGCCTCTATTCGGACCTTGACTCTGGCTTTGATTCCATCAATAACTGGCCATGTGACTGTGGACAAGGC 2366
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2367 CCCTATCATCTCTTGGCTTAAGTCCCCCATCTGTAAAGGGGAGTTGGGCTGAAAGTCTGAAGGTCTTTCCCGTG 2440
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2441 CTGAAATTCCAGGATTCAGGAGGTAGGATGAGGATTCTGGGCCTCTGGCTGGAAACCCCAAATAAGTTTTATTG 2514
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2515 CTGCTTTAAATTGGGCACCCCTGAGCCACCCATACGTATGACCTCTTTTCTGAGGTGAAGGATATTCTGAGATG 2588
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2589 ACCCAGCTCTGCTCAGAGCCCACAGTGACTGTATGACTCAGTCCTTAAATCACCCAAGGCTTCAAATAGACCCA 2662
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2663 CAGCAAATGCGAGACTTATTGGCATCTCCTCCCACCGGGCCATTAGACTAAACAGTGAATCTGTGCCTCCCAGG 2736
Query 250 ------------------------------------------------------------ 249
Sbjct 2737 AATCTTCCCTGTGTGATGTTTCTGAAGATTAAATAAAGAAAAACACGATTTACACTTTCC 2796
