Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10792
- Subject:
- NR_126364.1
- Aligned Length:
- 2449
- Identities:
- 222
- Gaps:
- 2202
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GCTGCCCAGACACAGGGCAGCCTTCCTCTCAGAACATCTTCTGTATCCTGAAAGCCTCCAGTGGGTTCATCCTT 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 CAAGTTAATGGACAGGAAAACTAAGACCAGTGAGGAATCCCAACACTCATCCTGCCAGGATAGAAAGGAAAGCC 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 CAGAGGCATTGCAAAGAGTGCTGAAGAGCAGGGATTCGCTGTATGGGGACAACTCTTGCTTTGTGTTTCAGGAC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGGGAACCCAGGAGTGCAAACCTCAGTCAGGTGCAGTCCAGAGCCTGTCTTGAGCATAATGGCTGCTCTGCTCT 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GCCCCCGACCCTCACCACCTCCAGCGGGGTTCATCATCCCAGTTTATGGACAGAAAAACTAAGACTAGAGGGGG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 AGGGCTTAGCTCCTGCTCGGAGGAGACCTTCAACTCCTTCACCTGCCTGGACTTGGCACCCTCCCAAGAGACTG 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CAACCAAGGTTATGAAAATAGCATCTACTCACCATCCTTCCTCAGCACACCCCCAACCAATCCACCCCTCAGTC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CCACCCCTGTCTCAAGGAGACTGAGCCCCGAGAAGCACAGCCTCCTGCACCTCCTCACCTCCCAGCCTGCCTTC 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 CTGGTCTATCTGCAATGTCCTCAAGTCCTTTCCCGTCCTCCTCATCCAAACTCCAAGACCTGCCTCACCTCACC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTCCTCCAGGAAGCCCCCTTCATGGTCTGGGTTCACTCCCTGTCATGACGTCCGCCCTCACCAGCACAGCACCA 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 AGCCTTGCAATGCTCTCTAGTAGTTATTTCCTGCACAGAGAAGGGGTGAGGGAAGCATCATTTCTGCCTATCCC 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TGTTCACACGCAAGGCTGGCTCTGCCTTCCCAGGGACCGTTCTGCAGAGGGAGACCGCTCATCAGGCAGGTACC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 ACCTCCAGGGATCTCACTAAGGTAGAACTGATGGGCCTCAGTTCTGTTCAGAGAACAGCTATACAGGCTGGAGG 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 CCTCCAAGAAACAGTTTCCATTTTCCCTGAGGAGTCTGTATGGATGTGTACTGTACAGGGTATAGGCTGTATGG 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AGTCTGCAGGTAAACATGCCTGTGTGTCAAAGAATGAGTCTGTATGGGTGTGTACTGTACAGGGTATATGCTGT 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 ATGGAGTCTGCAGGTAAACATGCCTGTGTGTCAAAGAATGAGCATGTGTGTGTGTGCATGTGTCAGCATGAGAA 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TGCCTCTGTGTTTGTGAGTGTGAGAGGGTCATATAGGTGCAGCATTCTGTTGATGGAGAGTCAAACTCTGTAAA 1258
Query 1 ----------------------ATGGAGTCTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCT 52
||||||||||.||||||..|||||||||||||||||||||..||||||||||
Sbjct 1259 AAAAAATTTTTTTTTTCTTTAGATGGAGTCTCACTCTGTCACCCAGGCTGGAGTGCAGTGGCGCGATCTCGGCT 1332
Query 53 CACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCT-TCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAG--A 123
||||||||||||.|||||||.|||||||||.||.|| .||||||||||||||..|||||||||||.||||| |
Sbjct 1333 CACTGCAACCTCCGCCTCCCGGGTTCAAGCAATCCTCCCTGCCTCAGCCTCCCAAGTAGCTGGGATTATAGGCA 1406
Query 124 CATGCACCACCACGCCCGGCTAA-TTTTGTA-TTTTTGGTCGAGACGGGGTTTT-GCCATGTTAGTCAGGCTGG 194
|.|| ||||||||..||.|||| ||||||| |||||.||.|||||.||||||| |.||||||.||||||||||
Sbjct 1407 CCTG--CCACCACGGTCGACTAATTTTTGTATTTTTTAGTAGAGACTGGGTTTTCGTCATGTTGGTCAGGCTGG 1478
Query 195 TCTTGAACTCCTGACCTCAAGTGATCCA-CCACCTCGGCCTCCCAAAGTGTTGAGA------------------ 249
|||||||||||||||||||.|||||||| |||||||.||||||||||||||||.||
Sbjct 1479 TCTTGAACTCCTGACCTCATGTGATCCACCCACCTCCGCCTCCCAAAGTGTTGGGATTACAAGCGTGAGCCACT 1552
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1553 GCACCCAGCCTGTAAAATATTTTAAGAGATTTATTCTGAGCCAAATATGAGTGACCGTGGCCTGTGACACAGCC 1626
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1627 CTCAGGAGGTCCTGAGAACATGTGCCCAAGGTGGTCGGGATACATCTTGGTTTTATGTATTTTAGGAAGGTATG 1700
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1701 AGACATCAATCAAATACATATAAGAAATACATTGATTTGGTTCAGAAAGGCAGAACAACTCAAAGCGGGGGGCT 1774
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1775 TCCAGGCTATAGGTAAATTTAAACATTTTCTGGTTGACAATTGTTTGAGTTTGTCTAAAGACCTGGGATCCATA 1848
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1849 GAAAGGAATGTTCAGTTTAAAGATAAAGGATTATAGAGACCAAGTTTTATTGTGCAGAGGAAGCTCTCAGATAG 1922
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1923 CAGACTTCAGACAGAGCAAGTTGTAAATTGTCTCTTATCGGACTTAAAAGGGTGCCTGGCTCTTACTTAGTTGA 1996
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1997 TTATCTCCTGGATCTGGAAAGAAAGGAAGGAAAACAAAGGCGGAAGGGGAATCTCTATAGAATGTGGATTTTTC 2070
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2071 CCACAAGAGACTTTGCAGGGCAATTTCAAGGTATGGCACGGAAATATATTTTGGGGTTAAATATTTTTTTCCTT 2144
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2145 GTCTCATAATGTTATGCCAGAGTCAGATTGAAAAGTAAATCACAACATATAGGGTCAAATAAAACCCATCTGAT 2218
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2219 GAGAATGTATGGTTTGTAGGGCATGACTTCCTAGACCTCTTAGGTAGGAATCTGGGTAAGACAGAATATCAGAC 2292
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2293 TTAGTCCTCAATTCCTAATGCAAAGTTCTGAGATCCAAAATGCTCCAAAATCTAAAACATTTTTTAGCACCGAC 2366
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2367 ATAATGCCACAAGTGGAAAATTCCACACTTGCTTCAATGTGCACAAACTTTGTTTCATGCATAAAATTATTCAA 2440
Query 250 ------- 249
Sbjct 2441 AATATTA 2447
