Nucleotide Global Alignment

Description

Query:
ccsbBroad304_10792
Subject:
NR_146617.1
Aligned Length:
2538
Identities:
215
Gaps:
2293

Alignment

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct    1  AATGATCATACAGTCTTAGAGCAAATGAAAGTAGCAGTTGTCCAGAGGGGGCTTGGGCCAGCCATCCGGCTGGA  74

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct   75  GAGACCTTCAGTAGGCTCAGAACAGCTGCGCTCATTCACTCACTGTTCCACTTTCTTGTAATGCCTGCACCAGT  148

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  149  CACAGTGTGGACTGGGGACCAGACGCAGATGCCCTGGCTGTCCTTGGCGGGCCTGGAAAGAGTGGAGCCCCAAG  222

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  223  TTGCCGGCTGGCAAACCTCCAGCTGTGGCCCGTGGGGTTTGCTCCATGGTGGCCTGGGCCACGCAGGCTGTACC  296

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  297  AGCCATGAGATGCCATGGAGCCAAAGGCTGCGACTGTAGCTGTTTGTGCTGCAGCCAACCTTTACCCAGTTCCT  370

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  371  GACTGCTGTTTGTTTGGTTTGCCATGGGTACTTCTGGGGACCTCCTGGCAGCATGCTGGCCCGTGCAACTCTCC  444

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  445  TCATGCCAGTTGTAGGGTCCCTGTTCCTGTTTGGCCAAGGAAGGGATTTCCTAAGTGTATACATATTTATTTAG  518

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  519  CTTTGCCATGTTTTGGATGGCCTTGGACATAGAAACTCATTGCACATTAGTTAAATAACTAGGCCAGCATTCTG  592

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  593  AAAGACCCGACTCCAGACCTACTTCGGTGATGGAGATGGGCACATGCAGGGTCAGGGTGCTTTGAAAGAGTCAC  666

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  667  ACATTCACCTTCCAACAGAGCAGCCTGAGGCTTCCCTAGTCTTGCAGGGTCAACTTGCTGAAAGCTCAGCCCTT  740

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  741  GGCCCCAAAGGAGCTCTGAGGCCGCAGGCCCAGAGCCCCGATGTCCCCGTGAGCTGGTGGCAGGGAAGCGGAAA  814

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  815  AAGGCTTTCACACCGCCTCCCCCACATATGCTCACAGCCTCCCCTGGGCCCTTTCTTGCCTCTCACATGGCCAT  888

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  889  CCTGTGGGTTCTTTGGCCTGGGAGGTGCTGCTTCAGCCTCCCTCGGCCTTGAGGTGCTCCAAGACAGCGTCAGC  962

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct  963  ACCTGGGCTAGAGGTCCGTGCTGCCCTGTGCATCCTCAGAGTTTGACTGTAGTGTGCATGTGTGCATGCATGTG  1036

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1037  CGTGTGTGTGCATGTGTGTGCTTGTGTATATGTGTGCATGTGTGTGCTTGTGTGCATGTGTGCATGCGCATGTA  1110

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1111  TGCGTGCGCACCGTTATTTTCTAATGGACTGTGCAGGCATCTGTTCTCCTCATGGACCAGGAACTCAGTGATCA  1184

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1185  GGGACTCCCCTGTTTACTTTGATATTCCAGCTGCCCTCCAGAGCGCCTAGCACATAGTAGGTCTTCAGTGACTG  1258

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1259  CCAGATGAGAGGATATTTAAATGAGACGGCAGCTTTGGAGGGATGACAACAGATTGTGGTCTAATCTCACGATT  1332

Query    1  --------------------------------------------------------------------------  0
                                                                                      
Sbjct 1333  TTTGCCTGAGAGAGAATTGGCCCTACTCGAGGCGGGCTTTTTTTTTCTTTTCTTTTCTTTTCTTTTTTTTTTGA  1406

Query    1  -ATGGAGTCTCGCTC-TGTTGCCCAGGCTGGAGTGCAGTGGCCTG--ATCTCGGCTCACTGCAACCTCTGCCTC  70
             |||||||.||.||| |||||||||.|||||||||||.|||  ||  |||||.||||||||||||.||||||||
Sbjct 1407  GATGGAGTTTCACTCTTGTTGCCCACGCTGGAGTGCAATGG--TGCAATCTCAGCTCACTGCAACGTCTGCCTC  1478

Query   71  CCAGGTTCAAGCGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCT  144
            ||.|||||||||||||||.|||||||.||||||.||.|||||||||.||.||.||||..||||.|  ||||||.
Sbjct 1479  CCGGGTTCAAGCGATTCTCCTGCCTCGGCCTCCTGATTAGCTGGGATTACAGGCATGTGCCACTA--CCCGGCC  1550

Query  145  AATTTTGTATTTTTGGTCGAGACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGA  218
            ||||||||||||||.||.|||||||||.||..|||||||.|||||||||||||.||||||||||||||||||||
Sbjct 1551  AATTTTGTATTTTTAGTAGAGACGGGGCTTCTCCATGTTGGTCAGGCTGGTCTGGAACTCCTGACCTCAAGTGA  1624

Query  219  TCCACC-ACCTCGGCCTCCCAAAGTGTTGAGA------------------------------------------  249
            |||||| .||||||||||||.||.||.||.||                                          
Sbjct 1625  TCCACCTGCCTCGGCCTCCCGAAATGCTGGGATTACAGGCATGAGCCACTGCGCCAGGCCAAGGCGGGCTTTAT  1698

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1699  TTGTGTCTGTTGGACACCTCACATGGCACCTCACAGGGCGCTGGTTTATAAAGACCCAAACCAGTGTCGAGTTC  1772

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1773  CATGCTGGCCCCGGCGTCTGCTGTGTGCTTTCGCTGTGTGTATACATGCGGAAGTTCATTCCGGAGGCTTCCAG  1846

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1847  GGTAGCCTCCCGGGTGCTGCAGCGGGTCTCCCGCTCATCACTACTCTGTACACAATGTCTTGATACGCTGAGGA  1920

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1921  TTGAAATGGAGCAGTGATCCTGCCTCAAGGTAGACAGCAAAACCCAGGCTATGTGGGAGTCAGTGTGGTAGGAC  1994

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 1995  TGAGGGCGTGCCTGAGGGACGGATGCAGGGGCAGAGAGAGCAGCAGGTGAAGGCTGGGCCTCCTGCTGAAAGCC  2068

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2069  GGTATTGCTGAGACTCCAGGGTCAGCCTTCCAGCTCCTCCTCCTGACTGACCGCTGGCAATGTAGGGGTGACTG  2142

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2143  TCCCAGCCTCCTGCTGCAGGGCGCTCTGCCGTCAGTAGAGAATCCTCCTCTGTCCCCGCGGTCCCCTCCCCGCT  2216

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2217  GAACAGCCTGGATCCTGCTTTCACAGGGACATGCGTGAAATGGGTCCTGCGCCGTAATTACTCCTGCTGGAGAC  2290

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2291  CGGGATTGCAAAGATGACTGTCATGTTGTCTCGTGCATCTTACATCTTTTACTGTGATTAAAAATAAATGTCGT  2364

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2365  GGGGTTCACGTCCCACAGACCCTTATGTACTGCAGAGGTCAAACTGGGGCGGGTTTCTCACACGCGTCATCACG  2438

Query  250  --------------------------------------------------------------------------  249
                                                                                      
Sbjct 2439  CGAGGCCAGTGTCCGTCGGGGTGTGTGTCTACAAGCACGGGGCTTCGTGGCCTATCTTTATGAACCCTCCAGGG  2512

Query  250  ----------------------  249
                                  
Sbjct 2513  TGATGTGAAGCCAGCCACAAAC  2534

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