Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10792
- Subject:
- XR_001749100.1
- Aligned Length:
- 3884
- Identities:
- 217
- Gaps:
- 3635
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CAGAGCCCCGCCGGGGCCGAAGGAGCGAGGGAGTTGCATTGTGGGAAGGGCGCAGCATGAGGATGGCCGCGGGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 GTGGCAGGTCCGAGCGCAGCCCGGAGAGCCGCGGGCAGCGCCTGGGACTACGGGCAGCGTTGGAGCGGAGGGCT 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GGCCCTGGGCACAGCCTGCAGATGGCCCGGGTTGGCGGGAAGGGGACCGAAGTGGCAGGGGCGGCGGGGAGCTC 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GGGCACCTTTAAAAACCCTTTGTCCCTAACCTGAAGCGGGAGGCACCTCCCCTCTTCCGGATCCAGCACCCGCA 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 GACCTGGTCAGCCCTTCCTGAGATCTGCCCTGTGGAGCTCTGCTTTGGGGACTGGGTGTGAGGTGAACCAGAAG 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 GATTTGCTGAGCACCGAGAAAGCACCGGCCTAGGCGCAAAGAGCCGGGGGCCAGCTCTTGGAGGGCCTGGAGAC 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 CCCACGTGGTCCCGACCGAAGGACCTGTGGACATCCAAAGGTGATACAGCTGGAAAAAGGATCTTCATCCAAGA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 CAAAGAGAAACAAAGTCGATAGGAAAGTGATGAAAGGCATCAAGCAAAGTGAAGATGCAAATGAGAAAACAAGA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TCAGAAGACAGGAATATCTGAAACAAGTCACAAATGCATAGTATGACCTCTCAGGTAAGGACCAGGGCTGGATC 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 ATCCCAGGATGTTCAAGGCATACTCTCAGGGGGCGCTGTGTTATACTGAGATCTTGCTAGGCAAAAACATGGTT 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 TTTGTCTTTTCTGTTGAAAAGGTACCTTTTGGGAGGCCAGGCGCGGTGGCTTACTCCTGTAATCCCAGCACTTT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 GGGAGGCTGAGGCGGGCGGATCACCTGAGGTAGGGAGTTCAAGACCAGCCTGACCAACATGGAGAAACCCCTTC 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TCTACTAAAAATACAAAATTAGCCAGGTGTGGTGGCACATGCCTGTAATGCCAGCTACTTGGGAGGCTGAGGCA 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 GGAGAATCGTTTAAACTCAGGAGGTGGAGGTGGCGGTGAGCCGAGATCATGCCATTGCACTCCAGCTTGAGCAA 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 AAAGAGCAAAATTCCGTCTCAAAAAAAAAAAAAAAAAAGAAAGAGAAAGAAAGAAAAAGAAAAGAAAAGGTACC 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TTTTGGGAAGAAGCATTAAAAAAATTTTTTTTTTCCGCTGGCAGTATTTAGGAAGAAGAATTCTATTTATTACT 1184
Query 1 -------------------------------------------------------------------ATGGAGT 7
|..||||
Sbjct 1185 TCAGTAGAGTAACATGCTTTACTAAAATAAGCTTCCATTCTACATGGTTTTTTTTTTTTTTTTTTAGACAGAGT 1258
Query 8 CTCGCTCTGTTGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAG 81
|||.||||||||||||||||||||||||||||...|||||||||||||||||||||||||||||..|||||.||
Sbjct 1259 CTCACTCTGTTGCCCAGGCTGGAGTGCAGTGGTGCGATCTCGGCTCACTGCAACCTCTGCCTCCTGGGTTCGAG 1332
Query 82 CGATTCTTCTGCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAA-TTTTGTAT 154
.|.||||.||||||||||||||.|||||||||||||||.||...|.|||||||||.||||||||| |||||||.
Sbjct 1333 TGTTTCTCCTGCCTCAGCCTCCCGAGTAGCTGGGACTACAGGAGTACACCACCACACCCGGCTAATTTTTGTAA 1406
Query 155 TTTTGGTCGAGACGGGG-TTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACC-AC 226
||||.||.||||||||| |||..||||.||.|||||||||||||.|||||||||||||||.|||||||||| .|
Sbjct 1407 TTTTAGTAGAGACGGGGATTTCACCATATTGGTCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCCACCTGC 1480
Query 227 CTCGGCCTCCCAAAGTGTTGAGA--------------------------------------------------- 249
||.||||||||||||||.||.||
Sbjct 1481 CTTGGCCTCCCAAAGTGCTGGGATTACAGGCATGAACCACTGCGCCTGGCCCATGATTGTTCTTAAAATAAGAA 1554
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1555 ACACCACATAATATTCAGTGTTCCTTATTTTGAAGGGCTCTTTATTTGGTTATATTTTAGGCATATGAAGCTAT 1628
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1629 TTCATAATCCCAAAAGGGGTATTTAATGAGATTTAGAATTGATAGTCTTCTGTTGATATATATTTATAGTTATT 1702
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1703 TATACACATATTTGTATGTTCTTAAAATAAAATGTTCAAAGTTTTTGATTCAAATGTAACATGTCTAAAATTGA 1776
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1777 AATCATTGTTTTTTTGTTTTTTTTTTTTCACAACTCAAACCCTCTTCTTTTCCCATAAACACCATATTGGGAAA 1850
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1851 TGGCACCACCATGGGCATAGTTGCTCAAGCTAGAAGGATGGGGGTATTTTGGCTCATCCCCTTCACTCTTCACA 1924
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1925 TCTAATTAATTCCCTCTTTTGAGTAACATTTACTAAGTGCCAGGCCTTCTGCTAGTCTTTCGTGAAGCTTGGAG 1998
Query 250 -------------------------------------------------------------------------- 249
Sbjct 1999 TTAGAGTGAGAGACCGATATTACTCAAATGATCTTGCCAGTGAATGTACAAGTTACAGGTGGAGATAAGTGCTC 2072
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2073 TGCAGAAAGGAGCATGACTCTTGTGAGAGAAACAGAAGACCATGTTCTGAACTGGGAATCAAGGAAGACTTCCC 2146
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2147 TGAGGACGTGACCCTTGTTTGGACTCTATTCTGTTTATGCTAAGGATTTTAATAAGGAGCAGGTGATGGACATG 2220
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2221 ATCCAGCGTACATTTTTAGAGGAATATCATGAGTCCTATCACTTCATCTCCTAAATATTTCTGACATCTGTTCT 2294
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2295 CTTTCCTCCATCCTCACGACCTTCACTGGCATGGGCCTCCAACAGCTCACTGTGGGGGAAGTTTCCCTCAAAGG 2368
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2369 GCACTGATAACACATCTTATTAAAACTATACCACATCATTATACCTCCCCAACATAATATGTACATGTATGTAT 2442
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2443 TTGACAATAATATATATGTATTACTGTCCTATTTATTATATACATTAAAAACATTCACAAAAAATTAAAAATCC 2516
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2517 AAATGGTAAGATTTTACATTTTTGATTTGATAACAATACTTTATTATATTACTAAACATATATTCCTAATTGTC 2590
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2591 ACTAAGATATTATCATGTTAGAGAAATTTGCTTCACTATACTATATCATTTTTTTAAATCTTAGTTTAATACTC 2664
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2665 TCTGATACAGCAATTCACAAGTCTACTTCCAACTCTGGCTTATTTTGATTCTTTCATGTAATGGCTGTCATAGC 2738
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2739 TGAAAAGGGACCTCACAGAGACCCAATGGAGGCAGTGTCCTATTGGCTATACTTCCCAAATCAAGCCATTCATT 2812
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2813 TCTCAATCCCATTCACTAATTTACAGAGATTTACTTATTTTTCATTGCTAGTCTGCAAATGTACACTTAAATGA 2886
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2887 AGGTCATCCTTAATAATTATGAATGTGAACCCATGAAACCTACTTCATAATTCTGAATTTGTTTTGACAGATTC 2960
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2961 TTTTCCACAGTTAGAGGGCCATTGCTATACCTGACATTGTGGCTGACAAAAGAGCTCTTATTAGGACTGGAAGT 3034
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3035 GTCAGTTCTACTTTTTCTTCTTTCTTTATGCTCATGTTATTATTATTTTTTAAATCTGAAGTTTAGAGGAATCT 3108
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3109 TTTAACTCTACTTGTCTATTTGGGAAGACACACTAAACTAGATAATATAATTTATAAATTCCCTCAACTAAGCA 3182
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3183 CACAGAACTGTAATACATTGAAATCTGCCAAAGAGAACAAATCAGTGAGGGCACGACTGTATTCCTTTGTGTCT 3256
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3257 TTTTCAAGACACCTTGAGTACTGTAAGTGACAGGGAGCCATCTGATGTACAGGCTGAAGGGGGCCACCATCAAC 3330
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3331 CTAGTAACCTAAACAGAAGTTCCAATATTTTCACCCTGCAGTCCACTTTGTAACCTTTTCTTAGCCTTCCACAA 3404
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3405 GAGTCTCCTAACTGGACTCCCTCCATCCACTTCTGGGCACCTAATGTCTCTACTACAGATTAGAAATTACTTTC 3478
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3479 ACAGAAGGCCATTTCTGAAACCCAAACTAGCTTATGTGTTACCCTACATTGAAATTATTCAGACGCTGTCTTCC 3552
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3553 CCAGTAATCTGCAAGTTTCACAAAGGTAGATGCCATGTTCTTAATGGTTTCCCAGCACATAGCACATAACAGAA 3626
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3627 GCTCAATAAATATTTGTTGAATGAATAAATGAGTAAACAGAATATTTTTACAGTTAAATACCTTTAATTCTTTT 3700
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3701 ATTTTTTTTAAATTTCAAGTCCTTAGAGGAGGAAGAATTGAAAAAATATGAAATATCAAATATACATTTAGCTA 3774
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3775 AATTTTTAAAGTTTAGTAGGCTATATGCATAAATCAAATGAATAGCAATATTTGGAACTGTAACTATTTTTGGA 3848
Query 250 ------------------------------------ 249
Sbjct 3849 ATCTTGTATGAATAAATTACAAGTTTAAAACATCAA 3884
