Nucleotide Global Alignment
Description
- Query:
- ccsbBroad304_10792
- Subject:
- XR_001753080.2
- Aligned Length:
- 3221
- Identities:
- 217
- Gaps:
- 2972
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 TGACCCGAGATTGCGCTACTGCACTCCAGCCTGGGCGACAGAGCGAGGTTCCGTCTCGAAAAAAAAAACAACGA 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 AAAGGGGACTCACTTCGGAGAAGCTGCCCTCTCTGCAAACTTATTTGAAGATGTGGTCTTGCTATGTTGCCCGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 GCTGAGTGCAGTGACTATTCACAGGCCGGATCTAGTGCACTGCAGTCTTGAACTCCTGGCTTACAGTCCTGCTG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 GTTCTGAGAGGCAGGGGAAGAAACGGCCACCATGCTCTGCAGCTAGGTCTCAGCATGAGGACCAAGAACCCTGG 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 TGTTCCTCCACTCATCGGAGCCGTATCATTTTGGTGCATTGGCCAGGAAAGGAAATTCAATCATGAGACTGAAA 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 ATGGCCCAAGACTCTGGATATGGTGGCGACTCAACTGAAATGGTAAAATAAATGACATTAACATTTAAAAAGGA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 GAACTCAGATGAAAGCATACACAGATGTGCATGCATACACATAACCAAACACACACACACACACACACACACAC 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 ACACACACACACACCCCAAACCAAACCAAAAAGGTTGACCCTCAATCTAACCTGGCTGTAATAAGGCAGCCAAA 592
Query 1 -------------------------------------------------------------------------- 0
Sbjct 593 TATGTATTTGTTGGTGCCTATTATTACGTTTCTCGTATAATTACTTAACACAAAATTTAAGTTACAACCTCTTT 666
Query 1 -------------------------------------------------------------------------- 0
Sbjct 667 CTCCTTTGAAACCAGGTGGGAAACATATAACTTGCAAATATCAAGAATTACATAATGTAATTTAATCAAATATG 740
Query 1 -------------------------------------------------------------------------- 0
Sbjct 741 GAATTTATAATATAGCAAAAATGGTACTAAATACTTCAGAAACTTTCTAAGAGGCAGATCATAGTATAATACCT 814
Query 1 -------------------------------------------------------------------------- 0
Sbjct 815 TTACAAATATATCCATTCAATTGAGTAATATGCAGTAATTGAAAATGACAGCTACATCATCAGTAAGAGACTAG 888
Query 1 -------------------------------------------------------------------------- 0
Sbjct 889 TTATTAATAGAATAAGGGATAACAGAATATTGATAACTGATAGGTAGGTCTAGTTTAAGGACTAGTGGCAGGAC 962
Query 1 -------------------------------------------------------------------------- 0
Sbjct 963 ACATTAAGTGAAAAAAAAAGCAGGTGTATAAAAAAATGTAGAGCAAGATCCTAGCTGTGTAAAGATATGCTATT 1036
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1037 TGTGTTACAGACAGACACAGACACACACACACACACACACACACACAAAATCTAAGGGGAGAAGGTCCTGGTCA 1110
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1111 TGACTGAGGGGAGAGGGACACTTAATATTTGCTTCCTTGTACTCCTTGAATTTACAAATTACTTTTTTTACTTT 1184
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1185 TATTCAAATACAAAATCACAGTTTACCTAAGAAAATGTTTAGGAGTAATGTTAAATGAAAAAAGAGTATCATAA 1258
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1259 CAAGCATGAAAACACATCAGAAGTGGAAAAAGATTACCAAAATGCTAATAATGATATTATAAGTTTTCTGGTTT 1332
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1333 CTAATTTTCAGTAAATTTGCTATATTACTTTTGTTGCTATTTAGTACTAGTAAGTAGTTATATTCCACTCCAGT 1406
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1407 AGGTGTAGCAAAATAAAAAGTAATAAAAAAGAAAAATAGAAAATAGTTATATTACTTTTATGAAAGAAAAAAAT 1480
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1481 TTATAAACCAACTTTCTCAAGCTAGGATTTGTTATTCCCCTCCCCAGAAGAAAATGAGAATGTGGATGGACTAT 1554
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1555 ACAAGTAGGTGTGTATATACACAAAAAAGAGATGAGATGATACCAGAAGTTGAGTTCAACTTCTATGCAATCAG 1628
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1629 TATCAGTCTATGACAGATTGTACATACAACTGAAAAGTACTAAAGTTATAATTAACAAACTTAAAGTGACAAGG 1702
Query 1 --------------------------------------------------------ATGGAGTCTCGC-TCTGT 17
|||||||.|||| |.|||
Sbjct 1703 CTGAATAGTGATCATGAATAAATTGCTACTATAAAAGCACTTTTTTTTTTTTTGAGATGGAGTTTCGCTTTTGT 1776
Query 18 TGCCCAGGCTGGAGTGCAGTGGCCTGATCTCGGCTCACTGCAACCTCTGCCTCCCAGGTTCAAGCGATTCTTCT 91
||||||||||||||||||.||||..|||||||||||||..||||.|||||||||||.||||||||||||||..|
Sbjct 1777 TGCCCAGGCTGGAGTGCAATGGCGCGATCTCGGCTCACCACAACGTCTGCCTCCCAAGTTCAAGCGATTCTCTT 1850
Query 92 GCCTCAGCCTCCAGAGTAGCTGGGACTATAGACATGCACCACCACGCCCGGCTAATTTTGTATTTTTGGTCGAG 165
||||||||||||.|||||||||.||.||.||.||||..||||||||||.||||||||||||||||||.||.|||
Sbjct 1851 GCCTCAGCCTCCCGAGTAGCTGAGATTACAGGCATGTGCCACCACGCCTGGCTAATTTTGTATTTTTAGTAGAG 1924
Query 166 ACGGGGTTTTGCCATGTTAGTCAGGCTGGTCTTGAACTCCTGACCTCAAGTGATCCACCACCTCGGCCTCCCAA 239
||.||||||..|||||||.|||||||||||||.|||||||||||||||.||||||..||.||||.|||||||||
Sbjct 1925 ACAGGGTTTCTCCATGTTGGTCAGGCTGGTCTCGAACTCCTGACCTCAGGTGATCGCCCGCCTCAGCCTCCCAA 1998
Query 240 AGTGTTGAGA---------------------------------------------------------------- 249
||||.|||||
Sbjct 1999 AGTGCTGAGATTACAGGCATGAGCTACTGCACCCGACCGATAAACGCACATTTTAAACAAATTAGTTTACTAAA 2072
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2073 ACTTCTGAAACAGATCATTAAGCAGGGTTTAAATATGTGTTTATCACTAAAACCAGAAAGGATTGGTTAGAAGT 2146
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2147 GTTATCTGTTGGTTAATAAGGACAAACAGTGGTATAATATTTCTAAACAGAGGAGATTAATGTTGACTCAGGTA 2220
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2221 ATCAAGGAAAGCTTCAGTGGAGGAAGTGTGATTTGAATTGAACCTCAAAGAATGGCAAAGTACTGTATAAAGAA 2294
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2295 CAATAAACCATAAAATATAATAAAGAACTATAAAAGATCTGAGACAGTAATGGCCATCAAACCAATACTACTAT 2368
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2369 TCTGTTTGTTAATTACCAAAGTTTCCATTTCCTGAAGTGTGACTAACCTACTTCCTGAAGTACCCTAACCAAAG 2442
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2443 GTAGATTCAACTTACTATATCTCTGAGCTGGCAAGAAAGCAAAATCCTCACAGGCCAAAAATTAAGTACAAGCA 2516
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2517 GGAAGGCAAGAAGTCAGTAATAGTTGAAGTTGACTGCCTGAGACAGCTCCTCAATCATGTTTGATGACCTTAAA 2590
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2591 CTTCCATTTTGAGGGTACAAGGGACTCTGGGGCTAGAAGACAAAGGCTGGGGCCCAGCCAAGGAGAGGAGGCTG 2664
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2665 ACAGGAGTCCCTTGAACAGAGGACTACACACTATGTAAGAACAGGCTAGGCTAGAAAAACAAAACCCCAAAACC 2738
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2739 TCACCTCTAAAAGATGAAAAAAGGAACTGTCTTTCTCAGTCTTGGTGCTCTTTGGAGGGAGAAAAATCCCCCCT 2812
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2813 CTCCAAATGCATAACTATACATTGCCCTTTCTTGAGTATTCAGAGCCCAAATTTGTGCTCTCTGATGATCTAAA 2886
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2887 AAACTCCTCATGTTGAGAAGTTAAAGTGACTTCAGACTGCAAGTATCTCCCAGAAGACTATCCTGGCTCTAATC 2960
Query 250 -------------------------------------------------------------------------- 249
Sbjct 2961 CAGGCTTATTTCCATTACACTATGTATGTTTTCTCAGTGCCTAGAGTGTGCAGAATTTGTTCCCCAGAGAATTT 3034
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3035 AGTGTGCTGTAGGTGTATTTTGTATTTTGCCAACTAAGGCATATAAGGCCATAAATTATAGAGAAGAATTAGCT 3108
Query 250 -------------------------------------------------------------------------- 249
Sbjct 3109 TTTAAAGTTTATGACCCTTAAAATACCTAATGACCAAAGTTAGTTTTTTAAAAAAGTGAAACAATTCACTCTAA 3182
Query 250 --------------------------------------- 249
Sbjct 3183 GGTAGCATATCTTTTTTTTTTTCTTTGAGACAGTCTTAC 3221
